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Aliases for IL12A-AS1 Gene

Subcategory (RNA class) for IL12A-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for IL12A-AS1 Gene

  • IL12A Antisense RNA 1 2 3
  • CTD-2049J23.2 3

External Ids for IL12A-AS1 Gene

ORGUL Members for IL12A-AS1 Gene

Summaries for IL12A-AS1 Gene

GeneCards Summary for IL12A-AS1 Gene

IL12A-AS1 (IL12A Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

fRNAdb sequence ontologies for IL12A-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for IL12A-AS1 Gene

Genomics for IL12A-AS1 Gene

Genomic Location for IL12A-AS1 Gene

Start:
159,913,400 bp from pter
End:
160,225,299 bp from pter
Size:
311,900 bases
Orientation:
Minus strand

Genomic View for IL12A-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IL12A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL12A-AS1 Gene

No data available for Regulatory Elements for IL12A-AS1 Gene

Proteins for IL12A-AS1 Gene

Post-translational modifications for IL12A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL12A-AS1 Gene

Domains for IL12A-AS1 Gene

Gene Families for IL12A-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with IL12A-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for IL12A-AS1 Gene

Function for IL12A-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IL12A-AS1 Gene

Localization for IL12A-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for IL12A-AS1 Gene

Pathways for IL12A-AS1 Gene

SuperPathways for IL12A-AS1 Gene

No Data Available

Interacting Proteins for IL12A-AS1 Gene

Gene Ontology (GO) - Biological Process for IL12A-AS1 Gene

None

No data available for Pathways by source for IL12A-AS1 Gene

Transcripts for IL12A-AS1 Gene

mRNA/cDNA for IL12A-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IL12A-AS1 Gene

No ASD Table

Relevant External Links for IL12A-AS1 Gene

GeneLoc Exon Structure for
IL12A-AS1
ECgene alternative splicing isoforms for
IL12A-AS1

Expression for IL12A-AS1 Gene

mRNA expression in normal human tissues for IL12A-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL12A-AS1 Gene

This gene is overexpressed in Esophagus - Mucosa (14.9), Testis (9.9), Brain - Cortex (5.6), and Brain - Frontal Cortex (BA9) (5.5).
genes like me logo Genes that share expressions with IL12A-AS1: view

Orthologs for IL12A-AS1 Gene

Evolution for IL12A-AS1 Gene

ENSEMBL:
Gene Tree for IL12A-AS1 (if available)
TreeFam:
Gene Tree for IL12A-AS1 (if available)

No data available for Orthologs for IL12A-AS1 Gene

Paralogs for IL12A-AS1 Gene

No data available for Paralogs for IL12A-AS1 Gene

Variants for IL12A-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL12A-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs385012 -- 159,925,784(-) AGGGG(A/G)GGATT intron-variant
rs386198 -- 159,924,414(-) agatg(G/T)ggtct intron-variant
rs407253 -- 159,924,389(-) ggctg(C/G)cctcc intron-variant
rs417216 -- 159,924,420(-) ttgta(A/G)agaag intron-variant
rs472372 -- 159,953,341(-) ggagt(C/T)ccaat intron-variant

Relevant External Links for IL12A-AS1 Gene

HapMap Linkage Disequilibrium report
IL12A-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for IL12A-AS1 Gene

Disorders for IL12A-AS1 Gene

No disorders were found for IL12A-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for IL12A-AS1 Gene

Publications for IL12A-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Newly identified genetic risk variants for celiac disease related to the immune response. (PMID: 18311140) Hunt K.A. … van Heel D.A. (Nat. Genet. 2008) 3
  3. Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants. (PMID: 19458352) Hirschfield G.M. … Siminovitch K.A. (N. Engl. J. Med. 2009) 3
  4. Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. (PMID: 19525953) De Jager P.L. … Oksenberg J.R. (Nat. Genet. 2009) 3
  5. Multiple common variants for celiac disease influencing immune gene expression. (PMID: 20190752) Dubois P.C. … van Heel D.A. (Nat. Genet. 2010) 3

Products for IL12A-AS1 Gene

Sources for IL12A-AS1 Gene

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