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Aliases for IL12A-AS1 Gene

Subcategory (RNA class) for IL12A-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL12A-AS1 Gene

  • IL12A Antisense RNA 1 2 3 5
  • CTD-2049J23.2 3

External Ids for IL12A-AS1 Gene

Previous GeneCards Identifiers for IL12A-AS1 Gene

  • GC03M159632

Summaries for IL12A-AS1 Gene

GeneCards Summary for IL12A-AS1 Gene

IL12A-AS1 (IL12A Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with IL12A-AS1 include behcet's disease.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL12A-AS1 Gene

Genomics for IL12A-AS1 Gene

Genomic Location for IL12A-AS1 Gene

Chromosome:
3
Start:
159,913,400 bp from pter
End:
160,225,299 bp from pter
Size:
311,900 bases
Orientation:
Minus strand

Genomic View for IL12A-AS1 Gene

Genes around IL12A-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL12A-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL12A-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL12A-AS1 Gene

No data available for Regulatory Elements for IL12A-AS1 Gene

Proteins for IL12A-AS1 Gene

Post-translational modifications for IL12A-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL12A-AS1 Gene

Domains & Families for IL12A-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL12A-AS1 Gene

Function for IL12A-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL12A-AS1 Gene

Localization for IL12A-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IL12A-AS1 Gene

Pathways & Interactions for IL12A-AS1 Gene

SuperPathways for IL12A-AS1 Gene

No Data Available

Interacting Proteins for IL12A-AS1 Gene

Gene Ontology (GO) - Biological Process for IL12A-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL12A-AS1 Gene

Drugs & Compounds for IL12A-AS1 Gene

No Compound Related Data Available

Transcripts for IL12A-AS1 Gene

mRNA/cDNA for IL12A-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IL12A-AS1 Gene

No ASD Table

Relevant External Links for IL12A-AS1 Gene

GeneLoc Exon Structure for
IL12A-AS1
ECgene alternative splicing isoforms for
IL12A-AS1

Expression for IL12A-AS1 Gene

mRNA expression in normal human tissues for IL12A-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL12A-AS1 Gene

This gene is overexpressed in Esophagus - Mucosa (x14.9), Testis (x9.9), Brain - Cortex (x5.6), and Brain - Frontal Cortex (BA9) (x5.5).
genes like me logo Genes that share expression patterns with IL12A-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for IL12A-AS1 Gene

Orthologs for IL12A-AS1 Gene

Evolution for IL12A-AS1 Gene

ENSEMBL:
Gene Tree for IL12A-AS1 (if available)
TreeFam:
Gene Tree for IL12A-AS1 (if available)

No data available for Orthologs for IL12A-AS1 Gene

Paralogs for IL12A-AS1 Gene

No data available for Paralogs for IL12A-AS1 Gene

Variants for IL12A-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL12A-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs530015 -- 159,972,628(+) AGTGA(G/T)AACTT intron-variant
rs579079 -- 160,015,641(+) ACAGG(C/T)GCACA intron-variant
rs579836 -- 159,970,679(+) ATAAC(A/C)CTATT intron-variant
rs501636 -- 159,960,395(+) ACATA(A/C)ATCAT intron-variant
rs386198 -- 159,924,414(-) agatg(G/T)ggtct intron-variant

Relevant External Links for IL12A-AS1 Gene

HapMap Linkage Disequilibrium report
IL12A-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL12A-AS1 Gene

Disorders for IL12A-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for IL12A-AS1 Gene - From: Orphanet

Disorder Aliases PubMed IDs
behcet's disease
  • adamantiades-behcet disease
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for IL12A-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL12A-AS1
genes like me logo Genes that share disorders with IL12A-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IL12A-AS1 Gene

Publications for IL12A-AS1 Gene

  1. Genome-wide association analysis identifies new susceptibility loci for BehAset's disease and epistasis between HLA-B*51 and ERAP1. (PMID: 23291587) Kirino Y. … Kastner D.L. (Nat. Genet. 2013) 3
  2. Common genetic variation and antidepressant efficacy in major depressive disorder: a meta-analysis of three genome-wide pharmacogenetic studies. (PMID: 23377640) (Am J Psychiatry 2013) 3
  3. Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis. (PMID: 21399635) Mells G.F. … Anderson C.A. (Nat. Genet. 2011) 3
  4. Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. (PMID: 21833088) . … Compston A. (Nature 2011) 3
  5. Multiple common variants for celiac disease influencing immune gene expression. (PMID: 20190752) Dubois P.C. … van Heel D.A. (Nat. Genet. 2010) 3

Products for IL12A-AS1 Gene

Sources for IL12A-AS1 Gene

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