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Aliases for IL11 Gene

Aliases for IL11 Gene

  • Interleukin 11 2 3 5
  • Adipogenesis Inhibitory Factor 2 3 4
  • Oprelvekin 2 3 4
  • IL-11 3 4
  • AGIF 3 4
  • Interleukin-11 3

External Ids for IL11 Gene

Previous GeneCards Identifiers for IL11 Gene

  • GC19M056740
  • GC19M056300
  • GC19M060551
  • GC19M060567
  • GC19M055875
  • GC19M052197

Summaries for IL11 Gene

Entrez Gene Summary for IL11 Gene

  • The protein encoded by this gene is a member of the gp130 family of cytokines. These cytokines drive the assembly of multisubunit receptor complexes, all of which contain at least one molecule of the transmembrane signaling receptor IL6ST (gp130). This cytokine is shown to stimulate the T-cell-dependent development of immunoglobulin-producing B cells. It is also found to support the proliferation of hematopoietic stem cells and megakaryocyte progenitor cells. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jun 2012]

GeneCards Summary for IL11 Gene

IL11 (Interleukin 11) is a Protein Coding gene. Diseases associated with IL11 include Hemorrhagic Cystitis and Mucositis. Among its related pathways are Hematopoietic cell lineage and Akt Signaling. GO annotations related to this gene include cytokine activity and interleukin-11 receptor binding.

UniProtKB/Swiss-Prot for IL11 Gene

  • Cytokine that stimulates the proliferation of hematopoietic stem cells and megakaryocyte progenitor cells and induces megakaryocyte maturation resulting in increased platelet production (PubMed:2145578). Also promotes the proliferation of hepatocytes in response to liver damage. Binding to its receptor formed by IL6ST and either IL11RA1 or IL11RA2 activates a signaling cascade that promotes cell proliferation (PubMed:12919066). Signaling leads to the activation of intracellular protein kinases and the phosphorylation of STAT3.

Gene Wiki entry for IL11 Gene

Additional gene information for IL11 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL11 Gene

Genomics for IL11 Gene

Regulatory Elements for IL11 Gene

Enhancers for IL11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H055337 1.8 FANTOM5 ENCODE dbSUPER 12.5 +30.6 30636 4 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 LENG8-AS1 U2AF2 LENG8 ENSG00000235681 ZNF628 FAM71E2 SSC5D KMT5C PPP6R1 LOC729999
GH19H055519 1.6 FANTOM5 Ensembl ENCODE 11.4 -149.7 -149747 0 HDGF ATF1 ZNF493 ZNF133 YBX1 GLI4 ZNF416 FOS ZNF548 ATF7 U2AF2 ZNF471 FIZ1 ZNF582 ZNF581 ZNF580 SSC5D ENSG00000267523 NAT14 ZNF667
GH19H055320 1.4 FANTOM5 Ensembl ENCODE 11.6 +47.1 47138 5 BACH1 CEBPG ZNF384 ZNF316 POLR2A SCRT2 NFE2 MAFK CREM SMARCE1 FCAR TMEM150B FAM71E2 IL11 TMEM190 HSPBP1 BRSK1 PPP6R1 RPL28 TMEM238
GH19H055459 1.4 ENCODE dbSUPER 11.4 -90.7 -90677 3 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 U2AF2 ZNF628 ZNF582 ENSG00000267523 SSC5D IL11 ZNF581 ENSG00000267096 FIZ1 NAT14
GH19H055503 1.3 Ensembl ENCODE 11.4 -133.5 -133506 1 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 CBX5 ZNF416 ZNF143 ZNF548 U2AF2 FIZ1 ZNF667 ZNF582-AS1 NAT14 ZNF667-AS1 ZNF542P ZNF582 ZNF583 ENSG00000267523
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IL11 on UCSC Golden Path with GeneCards custom track

Promoters for IL11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000289206 -37 201 MAZ CHD1 SIN3A NR3C1 RAD21 ZIC2 ZNF366 POLR2A PATZ1 CTBP2
ENSR00000111642 763 1001 PKNOX1 ZNF76 KLF17 SIN3A GLI4 ZNF121 GLIS2 EGR1 ZNF366 EGR2

Genomic Location for IL11 Gene

Chromosome:
19
Start:
55,364,382 bp from pter
End:
55,370,463 bp from pter
Size:
6,082 bases
Orientation:
Minus strand

Genomic View for IL11 Gene

Genes around IL11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL11 Gene

Proteins for IL11 Gene

  • Protein details for IL11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P20809-IL11_HUMAN
    Recommended name:
    Interleukin-11
    Protein Accession:
    P20809
    Secondary Accessions:
    • B4DQV5
    • Q96EB4

    Protein attributes for IL11 Gene

    Size:
    199 amino acids
    Molecular mass:
    21429 Da
    Quaternary structure:
    • Interacts with IL6ST and either IL11RA1 or IL11RA2, giving rise to a multimeric signaling complex.

    Three dimensional structures from OCA and Proteopedia for IL11 Gene

    Alternative splice isoforms for IL11 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IL11 Gene

Post-translational modifications for IL11 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IL11 Gene

Antibody Products

Assay Products

  • Cloud-Clone Corp. Assay Kits for IL11
  • Abcam assays for IL11

No data available for DME Specific Peptides for IL11 Gene

Domains & Families for IL11 Gene

Gene Families for IL11 Gene

HGNC:
Human Protein Atlas (HPA):
  • Cancer-related genes
  • Predicted intracellular proteins
  • Predicted secreted proteins

Protein Domains for IL11 Gene

Suggested Antigen Peptide Sequences for IL11 Gene

Graphical View of Domain Structure for InterPro Entry

P20809

UniProtKB/Swiss-Prot:

IL11_HUMAN :
  • Belongs to the IL-6 superfamily.
Family:
  • Belongs to the IL-6 superfamily.
genes like me logo Genes that share domains with IL11: view

Function for IL11 Gene

Molecular function for IL11 Gene

GENATLAS Biochemistry:
interleukin 11,40kDa,interleukin-6 cytokine family member,stimulating the proliferation of B cells,T cell dependent
UniProtKB/Swiss-Prot Function:
Cytokine that stimulates the proliferation of hematopoietic stem cells and megakaryocyte progenitor cells and induces megakaryocyte maturation resulting in increased platelet production (PubMed:2145578). Also promotes the proliferation of hepatocytes in response to liver damage. Binding to its receptor formed by IL6ST and either IL11RA1 or IL11RA2 activates a signaling cascade that promotes cell proliferation (PubMed:12919066). Signaling leads to the activation of intracellular protein kinases and the phosphorylation of STAT3.

Phenotypes From GWAS Catalog for IL11 Gene

Gene Ontology (GO) - Molecular Function for IL11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005125 cytokine activity IBA --
GO:0005142 interleukin-11 receptor binding NAS 2145578
GO:0005515 protein binding IPI 16189514
GO:0008083 growth factor activity IDA,IEA 2145578
genes like me logo Genes that share ontologies with IL11: view
genes like me logo Genes that share phenotypes with IL11: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for IL11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for IL11 Gene

Localization for IL11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IL11 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL11 gene
Compartment Confidence
extracellular 5
plasma membrane 2
cytoskeleton 1
mitochondrion 1
nucleus 1
cytosol 1

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for IL11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IEA --
GO:0005737 cytoplasm IBA --
genes like me logo Genes that share ontologies with IL11: view

Pathways & Interactions for IL11 Gene

genes like me logo Genes that share pathways with IL11: view

SIGNOR curated interactions for IL11 Gene

Activates:

Gene Ontology (GO) - Biological Process for IL11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007267 cell-cell signaling IC 2145578
GO:0008284 positive regulation of cell proliferation IDA 2145578
GO:0030183 B cell differentiation NAS 2145578
GO:0030219 megakaryocyte differentiation NAS 2145578
GO:0033138 positive regulation of peptidyl-serine phosphorylation IDA 7508917
genes like me logo Genes that share ontologies with IL11: view

Drugs & Compounds for IL11 Gene

(59) Drugs for IL11 Gene - From: PharmGKB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Escitalopram Approved, Investigational Pharma 0

(33) Additional Compounds for IL11 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with IL11: view

Transcripts for IL11 Gene

Unigene Clusters for IL11 Gene

Interleukin 11:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for IL11
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for IL11 Gene

No ASD Table

Relevant External Links for IL11 Gene

GeneLoc Exon Structure for
IL11
ECgene alternative splicing isoforms for
IL11

Expression for IL11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL11 Gene

mRNA differential expression in normal tissues according to GTEx for IL11 Gene

This gene is overexpressed in Prostate (x7.1), Pituitary (x5.9), Brain - Cerebellum (x5.7), Brain - Cerebellar Hemisphere (x5.0), and Kidney - Cortex (x5.0).

Protein differential expression in normal tissues from HIPED for IL11 Gene

This gene is overexpressed in Skin (53.3) and Islet of Langerhans (15.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for IL11 Gene



Protein tissue co-expression partners for IL11 Gene

NURSA nuclear receptor signaling pathways regulating expression of IL11 Gene:

IL11

SOURCE GeneReport for Unigene cluster for IL11 Gene:

Hs.467304

Evidence on tissue expression from TISSUES for IL11 Gene

  • Bone marrow(4.5)
  • Blood(2.5)
  • Bone(2.2)
genes like me logo Genes that share expression patterns with IL11: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL11 Gene

Orthologs for IL11 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IL11 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IL11 33 34
  • 99.5 (n)
dog
(Canis familiaris)
Mammalia IL11 33 34
  • 87.41 (n)
mouse
(Mus musculus)
Mammalia Il11 33 16 34
  • 82.91 (n)
rat
(Rattus norvegicus)
Mammalia Il11 33
  • 82.08 (n)
cow
(Bos Taurus)
Mammalia IL11 34
  • 78 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia IL11 34
  • 43 (a)
OneToOne
Species where no ortholog for IL11 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IL11 Gene

ENSEMBL:
Gene Tree for IL11 (if available)
TreeFam:
Gene Tree for IL11 (if available)

Paralogs for IL11 Gene

No data available for Paralogs for IL11 Gene

Variants for IL11 Gene

Sequence variations from dbSNP and Humsavar for IL11 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000277349 -- 55,372,067(+) AAGAC(C/T)TCCAT upstream-variant-2KB
rs1000519792 -- 55,369,100(+) TCTGA(A/G)GGAGG intron-variant
rs1000627847 -- 55,371,707(+) TCACC(C/T)AGGCT upstream-variant-2KB
rs1001385968 -- 55,364,029(+) CTTCT(C/G)TAGGC downstream-variant-500B, upstream-variant-2KB
rs1001437778 -- 55,369,337(+) CCCGG(A/T)CGCCG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IL11 Gene

Variant ID Type Subtype PubMed ID
nsv470162 CNV loss 18288195
nsv516199 CNV loss 19592680
nsv953624 CNV deletion 24416366

Variation tolerance for IL11 Gene

Gene Damage Index Score: 2.49; 43.59% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IL11 Gene

Human Gene Mutation Database (HGMD)
IL11
SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IL11 Gene

Disorders for IL11 Gene

MalaCards: The human disease database

(26) MalaCards diseases for IL11 Gene - From: HGMD, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
hemorrhagic cystitis
mucositis
  • inflammatory disease of mucous membrane
plasmacytoma
  • myeloma - solitary
thrombocytopenia
papillary conjunctivitis
- elite association - COSMIC cancer census association via MalaCards
Search IL11 in MalaCards View complete list of genes associated with diseases

Relevant External Links for IL11

Genetic Association Database (GAD)
IL11
Human Genome Epidemiology (HuGE) Navigator
IL11
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL11
genes like me logo Genes that share disorders with IL11: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IL11 Gene

Publications for IL11 Gene

  1. Genomic sequence and chromosomal location of human interleukin-11 gene (IL11). (PMID: 1386338) McKinley D … Yang YC (Genomics 1992) 2 3 4 22 60
  2. Genome-wide pharmacogenetics of antidepressant response in the GENDEP project. (PMID: 20360315) Uher R … McGuffin P (The American journal of psychiatry 2010) 3 22 45 60
  3. A polymorphism in the IL11 gene is associated with ulcerative colitis. (PMID: 12486609) Klein W … Epplen JT (Genes and immunity 2002) 3 22 45 60
  4. The structure of human interleukin-11 reveals receptor-binding site features and structural differences from interleukin-6. (PMID: 25195742) Putoczki TL … Griffin MD (Acta crystallographica. Section D, Biological crystallography 2014) 3 4 60
  5. Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls. (PMID: 20503287) Schuurhof A … Janssen R (Pediatric pulmonology 2010) 3 45 60

Products for IL11 Gene

Sources for IL11 Gene

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