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Aliases for IL10RB-AS1 Gene

Subcategory (RNA class) for IL10RB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL10RB-AS1 Gene

  • IL10RB Antisense RNA 1 (Head To Head) 2 3 5
  • IFNAR2 Antisense RNA 1 2 3
  • IFNAR2-AS1 3

External Ids for IL10RB-AS1 Gene

Previous GeneCards Identifiers for IL10RB-AS1 Gene

  • GC21M034639

Summaries for IL10RB-AS1 Gene

GeneCards Summary for IL10RB-AS1 Gene

IL10RB-AS1 (IL10RB Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL10RB-AS1 Gene

Genomics for IL10RB-AS1 Gene

Regulatory Elements for IL10RB-AS1 Gene

Enhancers for IL10RB-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F033264 1 Ensembl ENCODE 5.2 -1.7 -1733 6.6 PKNOX1 CREB3L1 WRNIP1 ZFP64 SIN3A YBX1 ZNF766 FOS KLF13 SP3 IL10RB IFNAR2 IL10RB-AS1 IFNAR1
GH21F033259 1 Ensembl ENCODE 0.4 +5.5 5517 2.9 SCRT1 SAP130 NRF1 BHLHE40 ARID4B MAX BRF2 RAD21 SCRT2 FOS IL10RB IFNAR2 DNAJC28 BTF3P6 IL10RB-AS1 ENSG00000249624
GH21F033246 0.8 ENCODE 0.3 +18.5 18510 2.1 NR2F1 NR2F6 MNT IL10RB IFNAR2 ENSG00000249624 IL10RB-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IL10RB-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for IL10RB-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001566313 -340 2001 WRNIP1 ZFP64 SIN3A ZNF48 GLIS2 ELK1 KLF13 SP3 JUNB REST

Genomic Location for IL10RB-AS1 Gene

Chromosome:
21
Start:
33,263,873 bp from pter
End:
33,266,260 bp from pter
Size:
2,388 bases
Orientation:
Minus strand

Genomic View for IL10RB-AS1 Gene

Genes around IL10RB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL10RB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL10RB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL10RB-AS1 Gene

Proteins for IL10RB-AS1 Gene

Post-translational modifications for IL10RB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL10RB-AS1 Gene

Domains & Families for IL10RB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL10RB-AS1 Gene

Function for IL10RB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL10RB-AS1 Gene

Localization for IL10RB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IL10RB-AS1 Gene

Pathways & Interactions for IL10RB-AS1 Gene

SuperPathways for IL10RB-AS1 Gene

No Data Available

Interacting Proteins for IL10RB-AS1 Gene

Gene Ontology (GO) - Biological Process for IL10RB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL10RB-AS1 Gene

Transcripts for IL10RB-AS1 Gene

mRNA/cDNA for IL10RB-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IL10RB-AS1 Gene

No ASD Table

Relevant External Links for IL10RB-AS1 Gene

GeneLoc Exon Structure for
IL10RB-AS1
ECgene alternative splicing isoforms for
IL10RB-AS1

Expression for IL10RB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IL10RB-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL10RB-AS1 Gene

This gene is overexpressed in Whole Blood (x7.2).
genes like me logo Genes that share expression patterns with IL10RB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IL10RB-AS1 Gene

Orthologs for IL10RB-AS1 Gene

Evolution for IL10RB-AS1 Gene

ENSEMBL:
Gene Tree for IL10RB-AS1 (if available)
TreeFam:
Gene Tree for IL10RB-AS1 (if available)

No data available for Orthologs for IL10RB-AS1 Gene

Paralogs for IL10RB-AS1 Gene

No data available for Paralogs for IL10RB-AS1 Gene

Variants for IL10RB-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL10RB-AS1 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs1058857 -- 33,266,477(+) TGGAG(C/T)CTTGG upstream-variant-2KB, reference, synonymous-codon
rs111485728 -- 33,267,847(+) TTGAA(A/C)ATAAT intron-variant, upstream-variant-2KB
rs114293465 -- 33,265,402(+) TTTAT(A/G)TGATT intron-variant, upstream-variant-2KB
rs12483382 -- 33,266,106(+) GCTCC(A/G)GACAA nc-transcript-variant, upstream-variant-2KB
rs13046195 -- 33,266,371(+) cATCT(C/T)CGCTG upstream-variant-2KB, utr-variant-5-prime

Relevant External Links for IL10RB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL10RB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL10RB-AS1 Gene

Disorders for IL10RB-AS1 Gene

Relevant External Links for IL10RB-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IL10RB-AS1

No disorders were found for IL10RB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL10RB-AS1 Gene

Publications for IL10RB-AS1 Gene

  1. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 64
  2. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 3 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for IL10RB-AS1 Gene

Sources for IL10RB-AS1 Gene

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