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Aliases for IGLC5 Gene

Subcategory (RNA class) for IGLC5 Gene

lncRNA

Aliases for IGLC5 Gene

  • Immunoglobulin Lambda Constant 5 (Pseudogene) 2 3 5
  • Immunoglobulin Lambda Constant Region 5 (Pseudogene) 3
  • Immunoglobulin Lambda Constant 5 Pseudogene 2
  • Immunoglobulin Lambda Constant 5 2
  • IGLC 3

External Ids for IGLC5 Gene

ORGUL Members for IGLC5 Gene

Previous HGNC Symbols for IGLC5 Gene

  • IGLC

Previous GeneCards Identifiers for IGLC5 Gene

  • GC22U990029
  • GC22P021582
  • GC22P021593
  • GC22P021603
  • GC22P021613
  • GC22P021623
  • GC22P021634
  • GC22P021644
  • GC22P021657
  • GC22P021670
  • GC22P023259
  • GC22P023306
  • GC22P023322

Summaries for IGLC5 Gene

GeneCards Summary for IGLC5 Gene

IGLC5 (Immunoglobulin Lambda Constant 5 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGLC5 Gene

Genomics for IGLC5 Gene

Regulatory Elements for IGLC5 Gene

Enhancers for IGLC5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F022899 1.1 Ensembl ENCODE 5.5 -13.8 -13820 4.8 TBL1XR1 WRNIP1 BMI1 ZNF335 GLIS2 EGR1 ZNF548 ZNF263 MCM3 CEBPZ ZNF70 IGLC2 IGLV3-4 IGLV2-5 IGLV5-52 ENSG00000272779 IGLC7 IGLJ2 IGLC5 IGLV10-54
GH22F022915 0.7 Ensembl 0.8 -1.2 -1223 0.8 ZNF263 MCM3 ZIC2 ZBTB7A RAD21 YY1 NR2F2 IKZF1 HNF4G SETDB1 IGLC2 IGLC7 IGLC5 IGLJ5
GH22F022914 0.6 ENCODE 0.8 -0.5 -504 0.3 ZNF263 KLF1 ID3 HNF4G RAD21 YY1 NR2F2 IGLC7 IGLC5 IGLJ5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGLC5 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGLC5 Gene

Chromosome:
22
Start:
22,915,624 bp from pter
End:
22,915,932 bp from pter
Size:
309 bases
Orientation:
Plus strand

Genomic View for IGLC5 Gene

Genes around IGLC5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGLC5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGLC5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGLC5 Gene

Proteins for IGLC5 Gene

Post-translational modifications for IGLC5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGLC5 Gene

Domains & Families for IGLC5 Gene

Gene Families for IGLC5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGLC5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGLC5 Gene

Function for IGLC5 Gene

Molecular function for IGLC5 Gene

GENATLAS Biochemistry:
immunoglobulin,lambda,constant segment 5,pseudogene

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGLC5 Gene

Localization for IGLC5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGLC5 Gene

Pathways & Interactions for IGLC5 Gene

SuperPathways for IGLC5 Gene

No Data Available

Interacting Proteins for IGLC5 Gene

Gene Ontology (GO) - Biological Process for IGLC5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGLC5 Gene

Transcripts for IGLC5 Gene

mRNA/cDNA for IGLC5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGLC5 Gene

No ASD Table

Relevant External Links for IGLC5 Gene

GeneLoc Exon Structure for
IGLC5
ECgene alternative splicing isoforms for
IGLC5

Expression for IGLC5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGLC5 Gene

mRNA differential expression in normal tissues according to GTEx for IGLC5 Gene

This gene is overexpressed in Spleen (x17.1), Whole Blood (x10.7), and Small Intestine - Terminal Ileum (x7.2).

NURSA nuclear receptor signaling pathways regulating expression of IGLC5 Gene:

IGLC5
genes like me logo Genes that share expression patterns with IGLC5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGLC5 Gene

Orthologs for IGLC5 Gene

Evolution for IGLC5 Gene

ENSEMBL:
Gene Tree for IGLC5 (if available)
TreeFam:
Gene Tree for IGLC5 (if available)

No data available for Orthologs for IGLC5 Gene

Paralogs for IGLC5 Gene

No data available for Paralogs for IGLC5 Gene

Variants for IGLC5 Gene

Relevant External Links for IGLC5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGLC5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGLC5 Gene

Disorders for IGLC5 Gene

No disorders were found for IGLC5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGLC5 Gene

Publications for IGLC5 Gene

  1. Human immunoglobulin C lambda 6 gene encodes the Kern+Oz-lambda chain and C lambda 4 and C lambda 5 are pseudogenes. (PMID: 3122211) Dariavach P. … Lefranc M.P. (Proc. Natl. Acad. Sci. U.S.A. 1987) 3 64
  2. Clustered arrangement of immunoglobulin lambda constant region genes in man. (PMID: 6273747) Hieter P.A. … Leder P. (Nature 1981) 3 64

Products for IGLC5 Gene

Sources for IGLC5 Gene

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