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Aliases for IGKV3D-7 Gene

Subcategory (RNA class) for IGKV3D-7 Gene

lncRNA

Aliases for IGKV3D-7 Gene

  • Immunoglobulin Kappa Variable 3D-7 2 3
  • IGKV3D7 3
  • L25 3

External Ids for IGKV3D-7 Gene

ORGUL Members for IGKV3D-7 Gene

Previous GeneCards Identifiers for IGKV3D-7 Gene

  • GC02U990155
  • GC02P090015
  • GC02P090032
  • GC02P089969
  • GC02P089911
  • GC02P090274

Summaries for IGKV3D-7 Gene

GeneCards Summary for IGKV3D-7 Gene

IGKV3D-7 (Immunoglobulin Kappa Variable 3D-7) is a Protein Coding gene, and is affiliated with the lncRNA class. An important paralog of this gene is IGKV3D-15.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV3D-7 Gene

Genomics for IGKV3D-7 Gene

Genomic Location for IGKV3D-7 Gene

Start:
90,234,812 bp from pter
End:
90,235,368 bp from pter
Size:
557 bases
Orientation:
Plus strand

Genomic View for IGKV3D-7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IGKV3D-7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV3D-7 Gene

No data available for Regulatory Elements for IGKV3D-7 Gene

Proteins for IGKV3D-7 Gene

  • Protein details for IGKV3D-7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087X1F7
    Recommended name:
    Protein IGKV3D-7
    Protein Accession:
    A0A087X1F7
    Secondary Accessions:

    Protein attributes for IGKV3D-7 Gene

    Size:
    54 amino acids
    Molecular mass:
    5436 Da
    Quaternary structure:
    No Data Available
  • Protein details for IGKV3D-7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0C4DH55
    Recommended name:
    Protein IGKV3D-7
    Protein Accession:
    A0A0C4DH55
    Secondary Accessions:

    Protein attributes for IGKV3D-7 Gene

    Size:
    119 amino acids
    Molecular mass:
    13148 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV3D-7 Gene

Proteomics data for IGKV3D-7 Gene at MOPED

Post-translational modifications for IGKV3D-7 Gene

No Post-translational modifications

Other Protein References for IGKV3D-7 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV3D-7 Gene

Domains for IGKV3D-7 Gene

Gene Families for IGKV3D-7 Gene

HGNC:
  • IGK :Immunoglobulins / IGK locus

Protein Domains for IGKV3D-7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV3D-7: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV3D-7 Gene

Function for IGKV3D-7 Gene

Gene Ontology (GO) - Molecular Function for IGKV3D-7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with IGKV3D-7: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IGKV3D-7 Gene

Localization for IGKV3D-7 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IGKV3D-7 Gene COMPARTMENTS Subcellular localization image for IGKV3D-7 gene
Compartment Confidence
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for IGKV3D-7 Gene

Pathways for IGKV3D-7 Gene

SuperPathways for IGKV3D-7 Gene

No Data Available

Interacting Proteins for IGKV3D-7 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000402914%0d%0a9606.ENSP00000278742%0d%0a9606.ENSP00000360730%0d%0a9606.ENSP00000275493%0d%0a
Selected Interacting proteins: ENSP00000402914 for IGKV3D-7 Gene via STRING

Gene Ontology (GO) - Biological Process for IGKV3D-7 Gene

None

No data available for Pathways by source for IGKV3D-7 Gene

Transcripts for IGKV3D-7 Gene

mRNA/cDNA for IGKV3D-7 Gene

(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV3D-7 Gene

No ASD Table

Relevant External Links for IGKV3D-7 Gene

GeneLoc Exon Structure for
IGKV3D-7
ECgene alternative splicing isoforms for
IGKV3D-7

Expression for IGKV3D-7 Gene

mRNA expression in normal human tissues for IGKV3D-7 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV3D-7 Gene

This gene is overexpressed in Spleen (16.0), Minor Salivary Gland (6.7), Colon - Transverse (6.2), Small Intestine - Terminal Ileum (4.6), and Stomach (4.2).

Integrated Proteomics: protein expression from PaxDb for IGKV3D-7 Gene

genes like me logo Genes that share expressions with IGKV3D-7: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IGKV3D-7 Gene

Orthologs for IGKV3D-7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV3D-7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 86 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 74 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 51 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 48 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 56 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 56 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
Species with no ortholog for IGKV3D-7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV3D-7 Gene

ENSEMBL:
Gene Tree for IGKV3D-7 (if available)
TreeFam:
Gene Tree for IGKV3D-7 (if available)

Paralogs for IGKV3D-7 Gene

Pseudogenes.org Pseudogenes for IGKV3D-7 Gene

genes like me logo Genes that share paralogs with IGKV3D-7: view

Variants for IGKV3D-7 Gene

Relevant External Links for IGKV3D-7 Gene

HapMap Linkage Disequilibrium report
IGKV3D-7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for IGKV3D-7 Gene

Disorders for IGKV3D-7 Gene

No disorders were found for IGKV3D-7 Gene.

No data available for UniProtKB/Swiss-Prot for IGKV3D-7 Gene

Publications for IGKV3D-7 Gene

  1. The V kappa genes of the L regions and the repertoire of V kappa gene sequences in the human germ line. (PMID: 8223863) Huber C. … Zachau H.G. (Eur. J. Immunol. 1993) 3
  2. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3

Products for IGKV3D-7 Gene

Sources for IGKV3D-7 Gene

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