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Aliases for IGKV3D-15 Gene

Aliases for IGKV3D-15 Gene

  • Immunoglobulin Kappa Variable 3D-15 (Gene/Pseudogene) 2 3
  • Immunoglobulin Light Chain Variable Region 3
  • Immunoglobulin Kappa Variable 3D-15 2
  • IGKV3D15 3
  • L16a 3
  • L16b 3
  • L16c 3
  • L16 3

External Ids for IGKV3D-15 Gene

Summaries for IGKV3D-15 Gene

GeneCards Summary for IGKV3D-15 Gene

IGKV3D-15 (Immunoglobulin Kappa Variable 3D-15 (Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is IGKV2-24.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV3D-15 Gene

Genomics for IGKV3D-15 Gene

Genomic Location for IGKV3D-15 Gene

Start:
90,114,838 bp from pter
End:
90,115,402 bp from pter
Size:
565 bases
Orientation:
Plus strand

Genomic View for IGKV3D-15 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IGKV3D-15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV3D-15 Gene

No data available for Regulatory Elements for IGKV3D-15 Gene

Proteins for IGKV3D-15 Gene

  • Protein details for IGKV3D-15 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WSY6-A0A087WSY6
    Recommended name:
    Protein IGKV3D-15
    Protein Accession:
    A0A087WSY6
    Secondary Accessions:

    Protein attributes for IGKV3D-15 Gene

    Size:
    115 amino acids
    Molecular mass:
    12534 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV3D-15 Gene

Proteomics data for IGKV3D-15 Gene at MOPED

Post-translational modifications for IGKV3D-15 Gene

No Post-translational modifications

Other Protein References for IGKV3D-15 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV3D-15 Gene

Domains for IGKV3D-15 Gene

Gene Families for IGKV3D-15 Gene

HGNC:
  • IGK :Immunoglobulins / IGK locus

Protein Domains for IGKV3D-15 Gene

genes like me logo Genes that share domains with IGKV3D-15: view

No data available for UniProtKB/Swiss-Prot for IGKV3D-15 Gene

Function for IGKV3D-15 Gene

Gene Ontology (GO) - Molecular Function for IGKV3D-15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with IGKV3D-15: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IGKV3D-15 Gene

Localization for IGKV3D-15 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IGKV3D-15 Gene COMPARTMENTS Subcellular localization image for IGKV3D-15 gene
Compartment Confidence
extracellular 5
plasma membrane 4

No data available for Gene Ontology (GO) - Cellular Components for IGKV3D-15 Gene

Pathways for IGKV3D-15 Gene

SuperPathways for IGKV3D-15 Gene

No Data Available

Interacting Proteins for IGKV3D-15 Gene

Gene Ontology (GO) - Biological Process for IGKV3D-15 Gene

None

No data available for Pathways by source for IGKV3D-15 Gene

Transcripts for IGKV3D-15 Gene

mRNA/cDNA for IGKV3D-15 Gene

(138) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV3D-15 Gene

No ASD Table

Relevant External Links for IGKV3D-15 Gene

GeneLoc Exon Structure for
IGKV3D-15
ECgene alternative splicing isoforms for
IGKV3D-15

Expression for IGKV3D-15 Gene

mRNA expression in normal human tissues for IGKV3D-15 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV3D-15 Gene

This gene is overexpressed in Spleen (21.4), Colon - Transverse (6.5), Small Intestine - Terminal Ileum (4.8), Whole Blood (4.3), and Minor Salivary Gland (4.1).

Integrated Proteomics: protein expression from for IGKV3D-15 Gene

genes like me logo Genes that share expressions with IGKV3D-15: view

Orthologs for IGKV3D-15 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV3D-15 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 37
  • 77 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 55 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
-- 37
  • 54 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
-- 37
  • 54 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 56 (a)
ManyToMany
-- 37
  • 53 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 50 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
Species with no ortholog for IGKV3D-15:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV3D-15 Gene

ENSEMBL:
Gene Tree for IGKV3D-15 (if available)
TreeFam:
Gene Tree for IGKV3D-15 (if available)

Paralogs for IGKV3D-15 Gene

genes like me logo Genes that share paralogs with IGKV3D-15: view

Variants for IGKV3D-15 Gene

Relevant External Links for IGKV3D-15 Gene

HapMap Linkage Disequilibrium report
IGKV3D-15

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for IGKV3D-15 Gene

Disorders for IGKV3D-15 Gene

No disorders were found for IGKV3D-15 Gene.

No data available for UniProtKB/Swiss-Prot for IGKV3D-15 Gene

Publications for IGKV3D-15 Gene

  1. The V kappa genes of the L regions and the repertoire of V kappa gene sequences in the human germ line. (PMID: 8223863) Huber C. … Zachau H.G. (Eur. J. Immunol. 1993) 3
  2. Myosin-reactive autoantibodies in rheumatic carditis and normal fetus. (PMID: 9614934) Wu X. … Young D.C. (Clin. Immunol. Immunopathol. 1998) 3
  3. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3

Products for IGKV3D-15 Gene

Sources for IGKV3D-15 Gene

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