Free for academic non-profit institutions. Other users need a Commercial license

Aliases for IGKV3D-11 Gene

Aliases for IGKV3D-11 Gene

  • Immunoglobulin Kappa Variable 3D-11 2 3
  • IGKV3D11 3
  • L20 3

External Ids for IGKV3D-11 Gene

Summaries for IGKV3D-11 Gene

GeneCards Summary for IGKV3D-11 Gene

IGKV3D-11 (Immunoglobulin Kappa Variable 3D-11) is a Protein Coding gene. Among its related pathways are PI-3K cascade and PI-3K cascade. GO annotations related to this gene include antigen binding. An important paralog of this gene is IGKV3D-15.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV3D-11 Gene

Genomics for IGKV3D-11 Gene

Genomic Location for IGKV3D-11 Gene

Start:
90,114,902 bp from pter
End:
90,173,414 bp from pter
Size:
58,513 bases
Orientation:
Plus strand

Genomic View for IGKV3D-11 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IGKV3D-11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV3D-11 Gene

No data available for Regulatory Elements for IGKV3D-11 Gene

Proteins for IGKV3D-11 Gene

  • Protein details for IGKV3D-11 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WUS2-A0A087WUS2
    Recommended name:
    Protein IGKV3D-11
    Protein Accession:
    A0A087WUS2
    Secondary Accessions:

    Protein attributes for IGKV3D-11 Gene

    Size:
    108 amino acids
    Molecular mass:
    11802 Da
    Quaternary structure:
    No Data Available
  • Protein details for IGKV3D-11 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MRZ8-A0A0A0MRZ8
    Recommended name:
    Protein IGKV3D-11
    Protein Accession:
    A0A0A0MRZ8
    Secondary Accessions:

    Protein attributes for IGKV3D-11 Gene

    Size:
    115 amino acids
    Molecular mass:
    12625 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV3D-11 Gene

Proteomics data for IGKV3D-11 Gene at MOPED

Post-translational modifications for IGKV3D-11 Gene

No Post-translational modifications

Other Protein References for IGKV3D-11 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV3D-11 Gene

Domains for IGKV3D-11 Gene

Gene Families for IGKV3D-11 Gene

HGNC:
  • IGK :Immunoglobulins / IGK locus

Protein Domains for IGKV3D-11 Gene

genes like me logo Genes that share domains with IGKV3D-11: view

No data available for UniProtKB/Swiss-Prot for IGKV3D-11 Gene

Function for IGKV3D-11 Gene

Gene Ontology (GO) - Molecular Function for IGKV3D-11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003823 antigen binding NAS 6440122
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with IGKV3D-11: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IGKV3D-11 Gene

Localization for IGKV3D-11 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IGKV3D-11 Gene COMPARTMENTS Subcellular localization image for IGKV3D-11 gene
Compartment Confidence
extracellular 3
cytosol 1
nucleus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for IGKV3D-11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005886 plasma membrane TAS --
GO:0070062 extracellular exosome IDA 23376485
GO:0072562 blood microparticle IDA 22516433
genes like me logo Genes that share ontologies with IGKV3D-11: view

Pathways for IGKV3D-11 Gene

genes like me logo Genes that share pathways with IGKV3D-11: view

Interacting Proteins for IGKV3D-11 Gene

Gene Ontology (GO) - Biological Process for IGKV3D-11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006898 receptor-mediated endocytosis TAS --
GO:0006955 immune response NAS 6440122
GO:0006956 complement activation TAS --
GO:0006958 complement activation, classical pathway TAS --
GO:0038095 Fc-epsilon receptor signaling pathway TAS --
genes like me logo Genes that share ontologies with IGKV3D-11: view

Transcripts for IGKV3D-11 Gene

mRNA/cDNA for IGKV3D-11 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV3D-11 Gene

No ASD Table

Relevant External Links for IGKV3D-11 Gene

GeneLoc Exon Structure for
IGKV3D-11
ECgene alternative splicing isoforms for
IGKV3D-11

Expression for IGKV3D-11 Gene

mRNA expression in normal human tissues for IGKV3D-11 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for IGKV3D-11 Gene

This gene is overexpressed in Spleen (13.2), Colon - Transverse (5.9), and Minor Salivary Gland (4.7).

Integrated Proteomics: protein expression from for IGKV3D-11 Gene

genes like me logo Genes that share expressions with IGKV3D-11: view

Orthologs for IGKV3D-11 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV3D-11 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 37
  • 77 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 55 (a)
ManyToMany
-- 37
  • 52 (a)
ManyToMany
-- 37
  • 56 (a)
ManyToMany
-- 37
  • 50 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 56 (a)
ManyToMany
-- 37
  • 57 (a)
ManyToMany
-- 37
  • 54 (a)
ManyToMany
-- 37
  • 58 (a)
ManyToMany
-- 37
  • 56 (a)
ManyToMany
-- 37
  • 53 (a)
ManyToMany
-- 37
  • 57 (a)
ManyToMany
-- 37
  • 53 (a)
ManyToMany
Species with no ortholog for IGKV3D-11:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV3D-11 Gene

ENSEMBL:
Gene Tree for IGKV3D-11 (if available)
TreeFam:
Gene Tree for IGKV3D-11 (if available)

Paralogs for IGKV3D-11 Gene

Pseudogenes.org Pseudogenes for IGKV3D-11 Gene

genes like me logo Genes that share paralogs with IGKV3D-11: view

Variants for IGKV3D-11 Gene

Relevant External Links for IGKV3D-11 Gene

HapMap Linkage Disequilibrium report
IGKV3D-11

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for IGKV3D-11 Gene

Disorders for IGKV3D-11 Gene

No disorders were found for IGKV3D-11 Gene.

No data available for UniProtKB/Swiss-Prot for IGKV3D-11 Gene

Publications for IGKV3D-11 Gene

  1. Physicochemical and functional characterization of the C1r subunit of the first complement component. (PMID: 814163) Ziccardi R.J. … Cooper N.R. (J. Immunol. 1976) 3
  2. A large section of the gene locus encoding human immunoglobulin variable regions of the kappa type is duplicated. (PMID: 3927006) Pech M. … Zachau H.G. (J. Mol. Biol. 1985) 3
  3. Immunoglobulin genes of different subgroups are interdigitated within the VK locus. (PMID: 6440122) Pech M. … Zachau H.G. (Nucleic Acids Res. 1984) 3
  4. The V kappa genes of the L regions and the repertoire of V kappa gene sequences in the human germ line. (PMID: 8223863) Huber C. … Zachau H.G. (Eur. J. Immunol. 1993) 3
  5. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3

Products for IGKV3D-11 Gene

Sources for IGKV3D-11 Gene

Back to Top

Content