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IGKV2D-38 Gene(Pseudogene)

Immunoglobulin Kappa Variable 2D-38 (Pseudogene)

GCID:
GC02P089872
GIFtS:
10
Genes Participants
UDN Logo

Aliases for IGKV2D-38 Gene

Subcategory (RNA class) for IGKV2D-38 Gene

lncRNA

Aliases for IGKV2D-38 Gene

  • Immunoglobulin Kappa Variable 2D-38 (Pseudogene) 2 3 5
  • Immunoglobulin Kappa Variable 2D-38 Pseudogene 2 3
  • Immunoglobulin Kappa Variable 2D-38 2
  • IGKV2D38 3
  • O3 3

External Ids for IGKV2D-38 Gene

ORGUL Members for IGKV2D-38 Gene

Previous GeneCards Identifiers for IGKV2D-38 Gene

  • GC02U990157
  • GC02P089913
  • GC02P089919
  • GC02P089922
  • GC02P090038

Summaries for IGKV2D-38 Gene

GeneCards Summary for IGKV2D-38 Gene

IGKV2D-38 (Immunoglobulin Kappa Variable 2D-38 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV2D-38 Gene

Genomics for IGKV2D-38 Gene

Products:

  1. Regulatory Element

Regulatory Elements for IGKV2D-38 Gene

Enhancers for IGKV2D-38 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IGKV2D-38 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGKV2D-38 Gene

Chromosome:
2
Start:
89,872,463 bp from pter
End:
89,872,702 bp from pter
Size:
240 bases
Orientation:
Plus strand

Genomic View for IGKV2D-38 Gene

Genes around IGKV2D-38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2D-38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2D-38 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for IGKV2D-38 Gene

Proteins for IGKV2D-38 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for IGKV2D-38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGKV2D-38 Gene

Domains & Families for IGKV2D-38 Gene

Gene Families for IGKV2D-38 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV2D-38: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV2D-38 Gene

Function for IGKV2D-38 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2D-38 Gene

Localization for IGKV2D-38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV2D-38 Gene

Pathways & Interactions for IGKV2D-38 Gene

SuperPathways for IGKV2D-38 Gene

PathCards logoMore details on SuperPathways for IGKV2D-38
No Data Available

Interacting Proteins for IGKV2D-38 Gene

Gene Ontology (GO) - Biological Process for IGKV2D-38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGKV2D-38 Gene

Drugs & Compounds for IGKV2D-38 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for IGKV2D-38 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for IGKV2D-38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2D-38 Gene

No ASD Table

Relevant External Links for IGKV2D-38 Gene

GeneLoc Exon Structure for
IGKV2D-38
ECgene alternative splicing isoforms for
IGKV2D-38

Expression for IGKV2D-38 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for IGKV2D-38 Gene

mRNA expression in normal human tissues for IGKV2D-38 Gene
mRNA expression by GTEx for IGKV2D-38 Gene
genes like me logo Genes that share expression patterns with IGKV2D-38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for IGKV2D-38 Gene

Orthologs for IGKV2D-38 Gene

Evolution for IGKV2D-38 Gene

ENSEMBL:
Gene Tree for IGKV2D-38 (if available)
TreeFam:
Gene Tree for IGKV2D-38 (if available)

No data available for Orthologs for IGKV2D-38 Gene

Paralogs for IGKV2D-38 Gene

No data available for Paralogs for IGKV2D-38 Gene

Variants for IGKV2D-38 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for IGKV2D-38 Gene

Disorders for IGKV2D-38 Gene

No disorders were found for IGKV2D-38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2D-38 Gene

Publications for IGKV2D-38 Gene

  1. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3 67
  2. The human immunoglobulin kappa locus: pseudogenes, unique and repetitive sequences. (PMID: 8011175) SchAoble K. … Zachau H.G. (Biol. Chem. Hoppe-Seyler 1994) 3

Products for IGKV2D-38 Gene

Sources for IGKV2D-38 Gene

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