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IGKV2D-38 Gene(Pseudogene)

Immunoglobulin Kappa Variable 2D-38 (Pseudogene)

GCID:
GC02P089872
GIFtS:
10
Genes Participants
UDN Logo

Aliases for IGKV2D-38 Gene

Subcategory (RNA class) for IGKV2D-38 Gene

lncRNA

Aliases for IGKV2D-38 Gene

  • Immunoglobulin Kappa Variable 2D-38 (Pseudogene) 2 3 5
  • Immunoglobulin Kappa Variable 2D-38 Pseudogene 2
  • Immunoglobulin Kappa Variable 2D-38 2
  • IGKV2D38 3
  • O3 3

External Ids for IGKV2D-38 Gene

ORGUL Members for IGKV2D-38 Gene

Previous GeneCards Identifiers for IGKV2D-38 Gene

  • GC02U990157
  • GC02P089913
  • GC02P089919
  • GC02P089922
  • GC02P090038

Summaries for IGKV2D-38 Gene

GeneCards Summary for IGKV2D-38 Gene

IGKV2D-38 (Immunoglobulin Kappa Variable 2D-38 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV2D-38 Gene

Genomics for IGKV2D-38 Gene

Products:

  1. Regulatory Element

Genomic Location for IGKV2D-38 Gene

Chromosome:
2
Start:
89,872,463 bp from pter
End:
89,872,702 bp from pter
Size:
240 bases
Orientation:
Plus strand

Genomic View for IGKV2D-38 Gene

Genes around IGKV2D-38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2D-38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2D-38 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for IGKV2D-38 Gene

No data available for Regulatory Elements for IGKV2D-38 Gene

Proteins for IGKV2D-38 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for IGKV2D-38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGKV2D-38 Gene

Domains & Families for IGKV2D-38 Gene

Gene Families for IGKV2D-38 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV2D-38: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV2D-38 Gene

Function for IGKV2D-38 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2D-38 Gene

Localization for IGKV2D-38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV2D-38 Gene

Pathways & Interactions for IGKV2D-38 Gene

SuperPathways for IGKV2D-38 Gene

PathCards logo More details on SuperPathways for IGKV2D-38
No Data Available

Interacting Proteins for IGKV2D-38 Gene

Gene Ontology (GO) - Biological Process for IGKV2D-38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGKV2D-38 Gene

Drugs & Compounds for IGKV2D-38 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for IGKV2D-38 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for IGKV2D-38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2D-38 Gene

No ASD Table

Relevant External Links for IGKV2D-38 Gene

GeneLoc Exon Structure for
IGKV2D-38
ECgene alternative splicing isoforms for
IGKV2D-38

Expression for IGKV2D-38 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGKV2D-38 Gene

mRNA expression in normal human tissues for IGKV2D-38 Gene
mRNA expression by GTEx for IGKV2D-38 Gene
genes like me logo Genes that share expression patterns with IGKV2D-38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGKV2D-38 Gene

Orthologs for IGKV2D-38 Gene

Evolution for IGKV2D-38 Gene

ENSEMBL:
Gene Tree for IGKV2D-38 (if available)
TreeFam:
Gene Tree for IGKV2D-38 (if available)

No data available for Orthologs for IGKV2D-38 Gene

Paralogs for IGKV2D-38 Gene

No data available for Paralogs for IGKV2D-38 Gene

Variants for IGKV2D-38 Gene

Relevant External Links for IGKV2D-38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGKV2D-38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGKV2D-38 Gene

Disorders for IGKV2D-38 Gene

No disorders were found for IGKV2D-38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2D-38 Gene

Publications for IGKV2D-38 Gene

  1. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3 64
  2. The human immunoglobulin kappa locus: pseudogenes, unique and repetitive sequences. (PMID: 8011175) SchAoble K. … Zachau H.G. (Biol. Chem. Hoppe-Seyler 1994) 3 64

Products for IGKV2D-38 Gene

Sources for IGKV2D-38 Gene

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