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Aliases for IGKV2D-26 Gene

Aliases for IGKV2D-26 Gene

  • Immunoglobulin Kappa Variable 2D-26 2 3 5
  • IGKV2D26 3
  • A5 3

External Ids for IGKV2D-26 Gene

Previous GeneCards Identifiers for IGKV2D-26 Gene

  • GC02U990162
  • GC02P089766
  • GC02P089783
  • GC02P089720
  • GC02P089664
  • GC02P090025
  • GC02P090026
  • GC02P090035
  • GC02P090068
  • GC02P090016
  • GC02P090097

Summaries for IGKV2D-26 Gene

GeneCards Summary for IGKV2D-26 Gene

IGKV2D-26 (Immunoglobulin Kappa Variable 2D-26) is a Pseudogene. An important paralog of this gene is IGKV2D-24.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV2D-26 Gene

Genomics for IGKV2D-26 Gene

Regulatory Elements for IGKV2D-26 Gene

Enhancers for IGKV2D-26 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IGKV2D-26 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGKV2D-26 Gene

Chromosome:
2
Start:
89,985,922 bp from pter
End:
89,986,704 bp from pter
Size:
783 bases
Orientation:
Plus strand

Genomic View for IGKV2D-26 Gene

Genes around IGKV2D-26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2D-26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2D-26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV2D-26 Gene

Proteins for IGKV2D-26 Gene

  • Protein details for IGKV2D-26 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MRZ7
    Recommended name:
    Protein IGKV2D-26
    Protein Accession:
    A0A0A0MRZ7

    Protein attributes for IGKV2D-26 Gene

    Size:
    120 amino acids
    Molecular mass:
    13297 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV2D-26 Gene

Proteomics data for IGKV2D-26 Gene at MOPED

Post-translational modifications for IGKV2D-26 Gene

No Post-translational modifications

Other Protein References for IGKV2D-26 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV2D-26 Gene

Domains & Families for IGKV2D-26 Gene

Gene Families for IGKV2D-26 Gene

Protein Domains for IGKV2D-26 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV2D-26: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV2D-26 Gene

Function for IGKV2D-26 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2D-26 Gene

Localization for IGKV2D-26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV2D-26 Gene

Pathways & Interactions for IGKV2D-26 Gene

SuperPathways for IGKV2D-26 Gene

No Data Available

Interacting Proteins for IGKV2D-26 Gene

Gene Ontology (GO) - Biological Process for IGKV2D-26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGKV2D-26 Gene

Drugs & Compounds for IGKV2D-26 Gene

No Compound Related Data Available

Transcripts for IGKV2D-26 Gene

mRNA/cDNA for IGKV2D-26 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2D-26 Gene

No ASD Table

Relevant External Links for IGKV2D-26 Gene

GeneLoc Exon Structure for
IGKV2D-26
ECgene alternative splicing isoforms for
IGKV2D-26

Expression for IGKV2D-26 Gene

mRNA expression in normal human tissues for IGKV2D-26 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV2D-26 Gene

This gene is overexpressed in Spleen (x9.2), Whole Blood (x5.8), Brain - Caudate (basal ganglia) (x5.4), Minor Salivary Gland (x4.7), and Colon - Transverse (x4.1).

Protein differential expression in normal tissues from HIPED for IGKV2D-26 Gene

This gene is overexpressed in Skin (51.2) and Saliva (12.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from for IGKV2D-26 Gene



genes like me logo Genes that share expression patterns with IGKV2D-26: view

Protein tissue co-expression partners for IGKV2D-26 Gene

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IGKV2D-26 Gene

Orthologs for IGKV2D-26 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for IGKV2D-26 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 65 (a)
ManyToMany
Species with no ortholog for IGKV2D-26:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV2D-26 Gene

ENSEMBL:
Gene Tree for IGKV2D-26 (if available)
TreeFam:
Gene Tree for IGKV2D-26 (if available)

Paralogs for IGKV2D-26 Gene

genes like me logo Genes that share paralogs with IGKV2D-26: view

Variants for IGKV2D-26 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for IGKV2D-26 Gene

Disorders for IGKV2D-26 Gene

No disorders were found for IGKV2D-26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2D-26 Gene

Publications for IGKV2D-26 Gene

  1. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. (PMID: 11298326) Kawasaki K. … Shimizu N. (Eur. J. Immunol. 2001) 3 67
  2. A directory of human germ-line V kappa segments reveals a strong bias in their usage. (PMID: 8149953) Cox J.P. … Winter G. (Eur. J. Immunol. 1994) 3
  3. The human VK locus. Characterization of a duplicated region encoding 28 different immunoglobulin genes. (PMID: 3351922) Straubinger B. … Zachau H.G. (J. Mol. Biol. 1988) 3

Products for IGKV2D-26 Gene

Sources for IGKV2D-26 Gene

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