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Aliases for IGKV2-40 Gene

Aliases for IGKV2-40 Gene

  • Immunoglobulin Kappa Variable 2-40 2 3 5
  • Ig Kappa Chain V-II 3
  • IGKV240 3
  • O11a 3
  • O11 3

External Ids for IGKV2-40 Gene

Previous GeneCards Identifiers for IGKV2-40 Gene

  • GC02U990194
  • GC02M089630
  • GC02M089670
  • GC02M089779
  • GC02M089988
  • GC02M090170

Summaries for IGKV2-40 Gene

GeneCards Summary for IGKV2-40 Gene

IGKV2-40 (Immunoglobulin Kappa Variable 2-40) is a Protein Coding gene. Among its related pathways are Regulation of actin dynamics for phagocytic cup formation and Immune System. GO annotations related to this gene include antigen binding. An important paralog of this gene is IGKV2D-24.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV2-40 Gene

Genomics for IGKV2-40 Gene

Regulatory Elements for IGKV2-40 Gene

Enhancers for IGKV2-40 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IGKV2-40 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGKV2-40 Gene

Chromosome:
2
Start:
89,330,110 bp from pter
End:
89,330,430 bp from pter
Size:
321 bases
Orientation:
Minus strand

Genomic View for IGKV2-40 Gene

Genes around IGKV2-40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2-40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2-40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV2-40 Gene

Proteins for IGKV2-40 Gene

  • Protein details for IGKV2-40 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WW87
    Recommended name:
    Protein IGKV2-40
    Protein Accession:
    A0A087WW87

    Protein attributes for IGKV2-40 Gene

    Size:
    105 amino acids
    Molecular mass:
    11531 Da
    Quaternary structure:
    No Data Available
  • Protein details for IGKV2-40 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087X0Q4
    Recommended name:
    Protein IGKV2-40
    Protein Accession:
    A0A087X0Q4

    Protein attributes for IGKV2-40 Gene

    Size:
    104 amino acids
    Molecular mass:
    11434 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV2-40 Gene

Proteomics data for IGKV2-40 Gene at MOPED

Post-translational modifications for IGKV2-40 Gene

No Post-translational modifications

Other Protein References for IGKV2-40 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV2-40 Gene

Domains & Families for IGKV2-40 Gene

Gene Families for IGKV2-40 Gene

Protein Domains for IGKV2-40 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV2-40: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV2-40 Gene

Function for IGKV2-40 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2-40 Gene

Localization for IGKV2-40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV2-40 Gene

Pathways & Interactions for IGKV2-40 Gene

genes like me logo Genes that share pathways with IGKV2-40: view

Interacting Proteins for IGKV2-40 Gene

Gene Ontology (GO) - Biological Process for IGKV2-40 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006955 immune response NAS 5586923
GO:0006956 complement activation TAS --
genes like me logo Genes that share ontologies with IGKV2-40: view

No data available for SIGNOR curated interactions for IGKV2-40 Gene

Drugs & Compounds for IGKV2-40 Gene

No Compound Related Data Available

Transcripts for IGKV2-40 Gene

mRNA/cDNA for IGKV2-40 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2-40 Gene

No ASD Table

Relevant External Links for IGKV2-40 Gene

GeneLoc Exon Structure for
IGKV2-40
ECgene alternative splicing isoforms for
IGKV2-40

Expression for IGKV2-40 Gene

mRNA expression in normal human tissues for IGKV2-40 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV2-40 Gene

This gene is overexpressed in Spleen (x12.9).

Protein differential expression in normal tissues from HIPED for IGKV2-40 Gene

This gene is overexpressed in Skin (53.4) and Urine (9.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from for IGKV2-40 Gene



genes like me logo Genes that share expression patterns with IGKV2-40: view

Protein tissue co-expression partners for IGKV2-40 Gene

- Elite partner

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IGKV2-40 Gene

Orthologs for IGKV2-40 Gene

Evolution for IGKV2-40 Gene

ENSEMBL:
Gene Tree for IGKV2-40 (if available)
TreeFam:
Gene Tree for IGKV2-40 (if available)

No data available for Orthologs for IGKV2-40 Gene

Paralogs for IGKV2-40 Gene

genes like me logo Genes that share paralogs with IGKV2-40: view

Variants for IGKV2-40 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for IGKV2-40 Gene

Disorders for IGKV2-40 Gene

No disorders were found for IGKV2-40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2-40 Gene

Publications for IGKV2-40 Gene

  1. In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. (PMID: 23533145) Principe S. … Drake R.R. (Proteomics 2013) 3 67
  2. The P-body component USP52/PAN2 is a novel regulator of HIF1A mRNA stability. (PMID: 23398456) Bett J.S. … Hay R.T. (Biochem. J. 2013) 3
  3. Proteomic analysis of microvesicles from plasma of healthy donors reveals high individual variability. (PMID: 22516433) Bastos-Amador P. … Falcon-Perez J.M. (J Proteomics 2012) 3
  4. The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. (PMID: 19710015) Crawford N.P. … Hunter K.W. (J. Biol. Chem. 2009) 3
  5. An investigation into the human serum "interactome". (PMID: 15174051) Zhou M. … Conrads T.P. (Electrophoresis 2004) 3

Products for IGKV2-40 Gene

Sources for IGKV2-40 Gene

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