Free for academic non-profit institutions. Other users need a Commercial license

Aliases for IGKV2-28 Gene

Aliases for IGKV2-28 Gene

  • Immunoglobulin Kappa Variable 2-28 2 3 5
  • IGKV228 3
  • A19 3

External Ids for IGKV2-28 Gene

Previous GeneCards Identifiers for IGKV2-28 Gene

  • GC02U990199
  • GC02M089406
  • GC02M089423
  • GC02M089360
  • GC02M089305
  • GC02M089524
  • GC02M089578
  • GC02M089749
  • GC02M089964
  • GC02M090139
  • GC02M089260
  • GC02M089338

Summaries for IGKV2-28 Gene

GeneCards Summary for IGKV2-28 Gene

IGKV2-28 (Immunoglobulin Kappa Variable 2-28) is a Protein Coding gene. An important paralog of this gene is IGKV2D-24.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV2-28 Gene

Genomics for IGKV2-28 Gene

Regulatory Elements for IGKV2-28 Gene

Enhancers for IGKV2-28 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IGKV2-28 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGKV2-28 Gene

Chromosome:
2
Start:
89,221,698 bp from pter
End:
89,222,461 bp from pter
Size:
764 bases
Orientation:
Minus strand

Genomic View for IGKV2-28 Gene

Genes around IGKV2-28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2-28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2-28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV2-28 Gene

Proteins for IGKV2-28 Gene

  • Protein details for IGKV2-28 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6P5
    Recommended name:
    Protein IGKV2-28
    Protein Accession:
    A0A075B6P5

    Protein attributes for IGKV2-28 Gene

    Size:
    120 amino acids
    Molecular mass:
    12957 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV2-28 Gene

Proteomics data for IGKV2-28 Gene at MOPED

Post-translational modifications for IGKV2-28 Gene

No Post-translational modifications

Other Protein References for IGKV2-28 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV2-28 Gene

Domains & Families for IGKV2-28 Gene

Gene Families for IGKV2-28 Gene

Protein Domains for IGKV2-28 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV2-28: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV2-28 Gene

Function for IGKV2-28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2-28 Gene

Localization for IGKV2-28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV2-28 Gene

Pathways & Interactions for IGKV2-28 Gene

SuperPathways for IGKV2-28 Gene

No Data Available

Interacting Proteins for IGKV2-28 Gene

Gene Ontology (GO) - Biological Process for IGKV2-28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGKV2-28 Gene

Drugs & Compounds for IGKV2-28 Gene

No Compound Related Data Available

Transcripts for IGKV2-28 Gene

mRNA/cDNA for IGKV2-28 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2-28 Gene

No ASD Table

Relevant External Links for IGKV2-28 Gene

GeneLoc Exon Structure for
IGKV2-28
ECgene alternative splicing isoforms for
IGKV2-28

Expression for IGKV2-28 Gene

mRNA expression in normal human tissues for IGKV2-28 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV2-28 Gene

This gene is overexpressed in Spleen (x16.7), Colon - Transverse (x6.5), Small Intestine - Terminal Ileum (x6.1), and Minor Salivary Gland (x6.0).

Protein differential expression in normal tissues from HIPED for IGKV2-28 Gene

This gene is overexpressed in Skin (29.7), Urine (14.9), and Saliva (14.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from for IGKV2-28 Gene



genes like me logo Genes that share expression patterns with IGKV2-28: view

Protein tissue co-expression partners for IGKV2-28 Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IGKV2-28 Gene

Orthologs for IGKV2-28 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV2-28 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 69 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 97 (a)
OneToMany
Species with no ortholog for IGKV2-28:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV2-28 Gene

ENSEMBL:
Gene Tree for IGKV2-28 (if available)
TreeFam:
Gene Tree for IGKV2-28 (if available)

Paralogs for IGKV2-28 Gene

genes like me logo Genes that share paralogs with IGKV2-28: view

Variants for IGKV2-28 Gene

Relevant External Links for IGKV2-28 Gene

HapMap Linkage Disequilibrium report
IGKV2-28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGKV2-28 Gene

Disorders for IGKV2-28 Gene

No disorders were found for IGKV2-28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2-28 Gene

Publications for IGKV2-28 Gene

  1. The human immunoglobulin kappa locus. Characterization of the duplicated A regions. (PMID: 1551402) Lautner-Rieske A. … Zachau H.G. (Eur. J. Immunol. 1992) 3 67

Products for IGKV2-28 Gene

Sources for IGKV2-28 Gene

Content