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Aliases for IGKV1OR2-118 Gene

Aliases for IGKV1OR2-118 Gene

  • Immunoglobulin Kappa Variable 1/OR2-118 (Pseudogene) 2 3 5
  • Immunoglobulin Kappa Variable 1/OR2-118 Pseudogene 2
  • IGKV1/OR2-118 3

External Ids for IGKV1OR2-118 Gene

Previous GeneCards Identifiers for IGKV1OR2-118 Gene

  • GC02P091002
  • GC02P091646
  • GC02P091679

Summaries for IGKV1OR2-118 Gene

GeneCards Summary for IGKV1OR2-118 Gene

IGKV1OR2-118 (Immunoglobulin Kappa Variable 1/OR2-118 (Pseudogene)) is a Pseudogene.

Additional gene information for IGKV1OR2-118 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV1OR2-118 Gene

Genomics for IGKV1OR2-118 Gene

GeneHancer (GH) Regulatory Elements for IGKV1OR2-118 Gene

Promoters and enhancers for IGKV1OR2-118 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I090323 Enhancer 0.4 Ensembl ENCODE 0.4 -8.9 -8893 3.1 IGKV1OR2-118 LOC101060017
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IGKV1OR2-118 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGKV1OR2-118 Gene

Genomic Locations for IGKV1OR2-118 Gene
chr2:90,315,092-90,316,061
(GRCh38/hg38)
Size:
970 bases
Orientation:
Minus strand
chr2:91,678,778-91,679,734
(GRCh37/hg19)

Genomic View for IGKV1OR2-118 Gene

Genes around IGKV1OR2-118 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV1OR2-118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV1OR2-118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGKV1OR2-118 Gene

Proteins for IGKV1OR2-118 Gene

Post-translational modifications for IGKV1OR2-118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGKV1OR2-118 Gene

Domains & Families for IGKV1OR2-118 Gene

Gene Families for IGKV1OR2-118 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV1OR2-118: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV1OR2-118 Gene

Function for IGKV1OR2-118 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV1OR2-118 Gene

Localization for IGKV1OR2-118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGKV1OR2-118 Gene

Pathways & Interactions for IGKV1OR2-118 Gene

SuperPathways for IGKV1OR2-118 Gene

No Data Available

Interacting Proteins for IGKV1OR2-118 Gene

Gene Ontology (GO) - Biological Process for IGKV1OR2-118 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGKV1OR2-118 Gene

Drugs & Compounds for IGKV1OR2-118 Gene

No Compound Related Data Available

Transcripts for IGKV1OR2-118 Gene

mRNA/cDNA for IGKV1OR2-118 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV1OR2-118 Gene

No ASD Table

Relevant External Links for IGKV1OR2-118 Gene

GeneLoc Exon Structure for
IGKV1OR2-118
ECgene alternative splicing isoforms for
IGKV1OR2-118

Expression for IGKV1OR2-118 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGKV1OR2-118 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV1OR2-118 Gene

This gene is overexpressed in Brain - Cerebellum (x10.2) and Brain - Cerebellar Hemisphere (x6.4).
genes like me logo Genes that share expression patterns with IGKV1OR2-118: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGKV1OR2-118 Gene

Orthologs for IGKV1OR2-118 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV1OR2-118 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 34
  • 56 (a)
OneToMany
Species where no ortholog for IGKV1OR2-118 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV1OR2-118 Gene

ENSEMBL:
Gene Tree for IGKV1OR2-118 (if available)
TreeFam:
Gene Tree for IGKV1OR2-118 (if available)

Paralogs for IGKV1OR2-118 Gene

No data available for Paralogs for IGKV1OR2-118 Gene

Variants for IGKV1OR2-118 Gene

Additional Variant Information for IGKV1OR2-118 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGKV1OR2-118

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGKV1OR2-118 Gene

Disorders for IGKV1OR2-118 Gene

No disorders were found for IGKV1OR2-118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV1OR2-118 Gene

Publications for IGKV1OR2-118 Gene

  1. Localization, analysis and evolution of transposed human immunoglobulin V kappa genes. (PMID: 2853099) Lötscher E … Zachau HG (Gene 1988) 3 58

Products for IGKV1OR2-118 Gene

Sources for IGKV1OR2-118 Gene

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