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Aliases for IGKV1OR2-108 Gene

Aliases for IGKV1OR2-108 Gene

  • Immunoglobulin Kappa Variable 1/OR2-108 (Non-Functional) 2 3 5
  • Immunoglobulin Orphon (Transposed Element) 1 2 3
  • Immunoglobulin Kappa Variable 1/OR2-108 2
  • IGKV1/OR2-108 3
  • IGKV1OR2108 3
  • IGO1 3

External Ids for IGKV1OR2-108 Gene

Previous GeneCards Identifiers for IGKV1OR2-108 Gene

  • GC02U990146
  • GC02P114166

Summaries for IGKV1OR2-108 Gene

GeneCards Summary for IGKV1OR2-108 Gene

IGKV1OR2-108 (Immunoglobulin Kappa Variable 1/OR2-108 (Non-Functional)) is a Protein Coding gene. An important paralog of this gene is IGKV1-6.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGKV1OR2-108 Gene

Genomics for IGKV1OR2-108 Gene

Regulatory Elements for IGKV1OR2-108 Gene

Enhancers for IGKV1OR2-108 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F113406 0.5 Ensembl 0.8 +0.0 5 0.8 ZFP69B KLF1 MAZ ZNF692 POLR2A ZIC2 FOXD4L1 IGKV1OR2-108 ENSG00000272563
GH02F113386 1.1 FANTOM5 Ensembl 0.3 -19.3 -19317 0.7 IL1RN IL36B PAX8-AS1 RNU6-1180P FOXD4L1 IL36G CBWD2 IL36RN IGKV1OR2-108 GC02P113352
GH02F113389 0.8 Ensembl ENCODE 0.3 -15.8 -15795 1.6 ELF3 ATF1 TBL1XR1 CREB3L1 ARID4B BMI1 ZSCAN9 ZNF2 RAD21 ZBTB40 PAX8-AS1 PAX8 RNU6-1180P PGM5P4-AS1 CBWD2 FOXD4L1 IGKV1OR2-108 GC02P113352
GH02F113376 1.2 FANTOM5 Ensembl ENCODE 0.3 -29.4 -29379 1.6 PKNOX1 MTA2 IKZF1 JUNB MLLT1 ETV6 CREM SPI1 IL1RN IL36B PAX8 PAX8-AS1 PSD4 RNU6-1180P CBWD2 FOXD4L1 IL36G GC02P113352
GH02F113430 1 Ensembl ENCODE 0.3 +25.7 25705 3.4 HINFP ZNF740 DDX20 NR4A1 TEAD2 PTRF PYGO2 PTTG1 MNT GTF2A2 FOXD4L1 CKAP2L ENSG00000272563 IGKV1OR2-108
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IGKV1OR2-108 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGKV1OR2-108 Gene

113,406,396 bp from pter
113,406,872 bp from pter
477 bases
Plus strand

Genomic View for IGKV1OR2-108 Gene

Genes around IGKV1OR2-108 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV1OR2-108 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV1OR2-108 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for IGKV1OR2-108 Gene

Proteins for IGKV1OR2-108 Gene

  • Protein details for IGKV1OR2-108 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein IGKV1OR2-108
    Protein Accession:

    Protein attributes for IGKV1OR2-108 Gene

    117 amino acids
    Molecular mass:
    12535 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGKV1OR2-108 Gene

Post-translational modifications for IGKV1OR2-108 Gene

No Post-translational modifications

Other Protein References for IGKV1OR2-108 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGKV1OR2-108 Gene

Domains & Families for IGKV1OR2-108 Gene

Gene Families for IGKV1OR2-108 Gene

Protein Domains for IGKV1OR2-108 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGKV1OR2-108: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGKV1OR2-108 Gene

Function for IGKV1OR2-108 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV1OR2-108 Gene

Localization for IGKV1OR2-108 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGKV1OR2-108 Gene

Pathways & Interactions for IGKV1OR2-108 Gene

SuperPathways for IGKV1OR2-108 Gene

No Data Available

Interacting Proteins for IGKV1OR2-108 Gene

Gene Ontology (GO) - Biological Process for IGKV1OR2-108 Gene


No data available for Pathways by source and SIGNOR curated interactions for IGKV1OR2-108 Gene

Transcripts for IGKV1OR2-108 Gene

mRNA/cDNA for IGKV1OR2-108 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV1OR2-108 Gene

No ASD Table

Relevant External Links for IGKV1OR2-108 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGKV1OR2-108 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGKV1OR2-108 Gene

mRNA differential expression in normal tissues according to GTEx for IGKV1OR2-108 Gene

This gene is overexpressed in Thyroid (x8.3), Skin - Not Sun Exposed (Suprapubic) (x6.4), Spleen (x4.9), and Adrenal Gland (x4.7).
genes like me logo Genes that share expression patterns with IGKV1OR2-108: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGKV1OR2-108 Gene

Orthologs for IGKV1OR2-108 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGKV1OR2-108 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia -- 35
  • 58 (a)
Species where no ortholog for IGKV1OR2-108 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGKV1OR2-108 Gene

Gene Tree for IGKV1OR2-108 (if available)
Gene Tree for IGKV1OR2-108 (if available)

Paralogs for IGKV1OR2-108 Gene

Variants for IGKV1OR2-108 Gene

Relevant External Links for IGKV1OR2-108 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGKV1OR2-108 Gene

Disorders for IGKV1OR2-108 Gene

No disorders were found for IGKV1OR2-108 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV1OR2-108 Gene

Publications for IGKV1OR2-108 Gene

  1. A human immunoglobulin kappa orphon without sequence defects may be the product of a pericentric inversion. (PMID: 2114012) Huber C. … Zachau H.G. (Nucleic Acids Res. 1990) 2 3 64
  2. Characterization of an in vivo reactivation model of herpes simplex virus from mice trigeminal ganglia. (PMID: 8245867) Birmanns B. … Steiner I. (J. Gen. Virol. 1993) 22 64

Products for IGKV1OR2-108 Gene

Sources for IGKV1OR2-108 Gene

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