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Aliases for IGHVIII-2-1 Gene

Subcategory (RNA class) for IGHVIII-2-1 Gene

lncRNA

Aliases for IGHVIII-2-1 Gene

  • Immunoglobulin Heavy Variable (III)-2-1 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable (III)-2-1 Pseudogene 2
  • Immunoglobulin Heavy Variable (III)-2-1 2
  • IGHV(III)-2-1 3
  • IGHVIII21 3
  • 3-02.1P 3

External Ids for IGHVIII-2-1 Gene

ORGUL Members for IGHVIII-2-1 Gene

Previous GeneCards Identifiers for IGHVIII-2-1 Gene

  • GC14U990112
  • GC14M104439
  • GC14M105538
  • GC14M106468
  • GC14M086601
  • GC14M106530
  • GC14M106752
  • GC14M107404
  • GC14M107596

Summaries for IGHVIII-2-1 Gene

GeneCards Summary for IGHVIII-2-1 Gene

IGHVIII-2-1 (Immunoglobulin Heavy Variable (III)-2-1 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHVIII-2-1 Gene

Genomics for IGHVIII-2-1 Gene

Regulatory Elements for IGHVIII-2-1 Gene

Enhancers for IGHVIII-2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F106004 0.9 Ensembl ENCODE 0.8 -3.6 -3621 1.9 CTCF ZNF654 L3MBTL2 MAX USF2 FEZF1 REST RAD21 RAD51 ATF3 IGHV1-3 IGHVIII-2-1
GH14F105998 0.7 Ensembl ENCODE 0.8 +2.7 2735 1.0 CTCF RAD21 IGHVIII-2-1 IGHV1-2
GH14F105986 0.6 Ensembl ENCODE 0.4 +14.7 14682 2.2 ATF2 IGHV1-2 IGHVIII-2-1
GH14F105993 0.5 ENCODE 0.4 +7.6 7627 0.8 CTCF ZBTB11 GABPA IGHV1-2 IGHVIII-2-1
GH14F105989 0.4 Ensembl 0.4 +11.9 11935 0.2 SCRT2 FOS IGHV1-2 IGHVIII-2-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHVIII-2-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHVIII-2-1 Gene

Chromosome:
14
Start:
106,001,534 bp from pter
End:
106,001,835 bp from pter
Size:
302 bases
Orientation:
Minus strand

Genomic View for IGHVIII-2-1 Gene

Genes around IGHVIII-2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHVIII-2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHVIII-2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHVIII-2-1 Gene

Proteins for IGHVIII-2-1 Gene

Post-translational modifications for IGHVIII-2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHVIII-2-1 Gene

Domains & Families for IGHVIII-2-1 Gene

Gene Families for IGHVIII-2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHVIII-2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHVIII-2-1 Gene

Function for IGHVIII-2-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHVIII-2-1 Gene

Localization for IGHVIII-2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHVIII-2-1 Gene

Pathways & Interactions for IGHVIII-2-1 Gene

SuperPathways for IGHVIII-2-1 Gene

No Data Available

Interacting Proteins for IGHVIII-2-1 Gene

Gene Ontology (GO) - Biological Process for IGHVIII-2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHVIII-2-1 Gene

Transcripts for IGHVIII-2-1 Gene

mRNA/cDNA for IGHVIII-2-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHVIII-2-1 Gene

No ASD Table

Relevant External Links for IGHVIII-2-1 Gene

GeneLoc Exon Structure for
IGHVIII-2-1
ECgene alternative splicing isoforms for
IGHVIII-2-1

Expression for IGHVIII-2-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGHVIII-2-1 Gene

genes like me logo Genes that share expression patterns with IGHVIII-2-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGHVIII-2-1 Gene

Orthologs for IGHVIII-2-1 Gene

Evolution for IGHVIII-2-1 Gene

ENSEMBL:
Gene Tree for IGHVIII-2-1 (if available)
TreeFam:
Gene Tree for IGHVIII-2-1 (if available)

No data available for Orthologs for IGHVIII-2-1 Gene

Paralogs for IGHVIII-2-1 Gene

No data available for Paralogs for IGHVIII-2-1 Gene

Variants for IGHVIII-2-1 Gene

Relevant External Links for IGHVIII-2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHVIII-2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHVIII-2-1 Gene

Disorders for IGHVIII-2-1 Gene

No disorders were found for IGHVIII-2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHVIII-2-1 Gene

Publications for IGHVIII-2-1 Gene

  1. The complete nucleotide sequence of the human immunoglobulin heavy chain variable region locus. (PMID: 9841928) Matsuda F. … Honjo T. (J. Exp. Med. 1998) 3 64

Products for IGHVIII-2-1 Gene

Sources for IGHVIII-2-1 Gene

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