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Aliases for IGHV5-78 Gene

Aliases for IGHV5-78 Gene

  • Immunoglobulin Heavy Variable 5-78 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 5-78 Pseudogene 2
  • Immunoglobulin Heavy Variable 5-78 2
  • IGHV578 3
  • 5-78P 3
  • VH5 3

External Ids for IGHV5-78 Gene

Previous GeneCards Identifiers for IGHV5-78 Gene

  • GC14U990143
  • GC14M105231
  • GC14M106330
  • GC14M107258
  • GC14M087411
  • GC14M107264
  • GC14M107363
  • GC14M107519
  • GC14M107711
  • GC14M107015
  • GC14M107753
  • GC14M107846
  • GC14M107945
  • GC14M108044
  • GC14M108161
  • GC14M108300

Summaries for IGHV5-78 Gene

GeneCards Summary for IGHV5-78 Gene

IGHV5-78 (Immunoglobulin Heavy Variable 5-78 (Pseudogene)) is a Pseudogene.

Additional gene information for IGHV5-78 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV5-78 Gene

Genomics for IGHV5-78 Gene

GeneHancer (GH) Regulatory Elements for IGHV5-78 Gene

Promoters and enhancers for IGHV5-78 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I106850 Enhancer 0.8 ENCODE dbSUPER 550.8 +0.2 238 1.3 RXRA EBF1 REST POLR2A IKZF1 ZSCAN29 RUNX3 IKZF2 IGHV5-78 MIR5195 IGH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGHV5-78 Gene

Genomic Locations for IGHV5-78 Gene
chr14:106,851,112-106,851,546
(GRCh38/hg38)
Size:
435 bases
Orientation:
Minus strand
chr14:107,259,327-107,259,761
(GRCh37/hg19)

Genomic View for IGHV5-78 Gene

Genes around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV5-78 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV5-78 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV5-78 Gene

Proteins for IGHV5-78 Gene

Post-translational modifications for IGHV5-78 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV5-78 Gene

Domains & Families for IGHV5-78 Gene

Gene Families for IGHV5-78 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV5-78: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV5-78 Gene

Function for IGHV5-78 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV5-78 Gene

Localization for IGHV5-78 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGHV5-78 Gene

Pathways & Interactions for IGHV5-78 Gene

SuperPathways for IGHV5-78 Gene

No Data Available

Interacting Proteins for IGHV5-78 Gene

Gene Ontology (GO) - Biological Process for IGHV5-78 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHV5-78 Gene

Drugs & Compounds for IGHV5-78 Gene

No Compound Related Data Available

Transcripts for IGHV5-78 Gene

mRNA/cDNA for IGHV5-78 Gene

(4) Additional mRNA sequences :
(16) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IGHV5-78 Gene

Immunoglobulin heavy variable 5-78 (pseudogene):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV5-78 Gene

No ASD Table

Relevant External Links for IGHV5-78 Gene

GeneLoc Exon Structure for
IGHV5-78
ECgene alternative splicing isoforms for
IGHV5-78

Expression for IGHV5-78 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV5-78 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV5-78 Gene

This gene is overexpressed in Spleen (x8.0), Whole Blood (x5.4), and Small Intestine - Terminal Ileum (x5.1).

SOURCE GeneReport for Unigene cluster for IGHV5-78 Gene:

Hs.81221
genes like me logo Genes that share expression patterns with IGHV5-78: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV5-78 Gene

Orthologs for IGHV5-78 Gene

Evolution for IGHV5-78 Gene

ENSEMBL:
Gene Tree for IGHV5-78 (if available)
TreeFam:
Gene Tree for IGHV5-78 (if available)

No data available for Orthologs for IGHV5-78 Gene

Paralogs for IGHV5-78 Gene

No data available for Paralogs for IGHV5-78 Gene

Variants for IGHV5-78 Gene

Additional Variant Information for IGHV5-78 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV5-78

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV5-78 Gene

Disorders for IGHV5-78 Gene

Additional Disease Information for IGHV5-78

No disorders were found for IGHV5-78 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV5-78 Gene

Publications for IGHV5-78 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. Molecular cloning and characterization of the t(2;14) translocation associated with childhood chronic lymphocytic leukemia. (PMID: 1373880) Richardson AL … Tucker PW (Oncogene 1992) 3 58
  3. Structure and expression of human germline VH transcripts. (PMID: 1903431) Berman JE … Tucker PW (The Journal of experimental medicine 1991) 3 58
  4. Content and organization of the human Ig VH locus: definition of three new VH families and linkage to the Ig CH locus. (PMID: 3396540) Berman JE … Cantor CR (The EMBO journal 1988) 3 58

Products for IGHV5-78 Gene

Sources for IGHV5-78 Gene

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