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Aliases for IGHV5-78 Gene

Aliases for IGHV5-78 Gene

  • Immunoglobulin Heavy Variable 5-78 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 5-78 Pseudogene 2 3
  • Immunoglobulin Heavy Variable 5-78 2
  • IGHV578 3
  • 5-78P 3
  • VH5 3

External Ids for IGHV5-78 Gene

Previous GeneCards Identifiers for IGHV5-78 Gene

  • GC14U990143
  • GC14M105231
  • GC14M106330
  • GC14M107258
  • GC14M087411
  • GC14M107264
  • GC14M107363
  • GC14M107519
  • GC14M107711
  • GC14M107015
  • GC14M107753

Summaries for IGHV5-78 Gene

GeneCards Summary for IGHV5-78 Gene

IGHV5-78 (Immunoglobulin Heavy Variable 5-78 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV5-78 Gene

Genomics for IGHV5-78 Gene

Regulatory Elements for IGHV5-78 Gene


Promoters for IGHV5-78 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHV5-78 Gene

Chromosome:
14
Start:
106,851,112 bp from pter
End:
106,851,546 bp from pter
Size:
435 bases
Orientation:
Minus strand

Genomic View for IGHV5-78 Gene

Genes around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV5-78 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV5-78 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV5-78 Gene

Proteins for IGHV5-78 Gene

Post-translational modifications for IGHV5-78 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV5-78 Gene

Domains & Families for IGHV5-78 Gene

Gene Families for IGHV5-78 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV5-78: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV5-78 Gene

Function for IGHV5-78 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV5-78 Gene

Localization for IGHV5-78 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV5-78 Gene

Pathways & Interactions for IGHV5-78 Gene

SuperPathways for IGHV5-78 Gene

No Data Available

Interacting Proteins for IGHV5-78 Gene

Gene Ontology (GO) - Biological Process for IGHV5-78 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHV5-78 Gene

Drugs & Compounds for IGHV5-78 Gene

No Compound Related Data Available

Transcripts for IGHV5-78 Gene

mRNA/cDNA for IGHV5-78 Gene

(4) Additional mRNA sequences :
(16) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IGHV5-78 Gene

Immunoglobulin heavy variable 5-78 (pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV5-78 Gene

No ASD Table

Relevant External Links for IGHV5-78 Gene

GeneLoc Exon Structure for
IGHV5-78
ECgene alternative splicing isoforms for
IGHV5-78

Expression for IGHV5-78 Gene

mRNA expression in normal human tissues for IGHV5-78 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV5-78 Gene

This gene is overexpressed in Spleen (x8.0), Whole Blood (x5.4), and Small Intestine - Terminal Ileum (x5.1).

SOURCE GeneReport for Unigene cluster for IGHV5-78 Gene Hs.81221

genes like me logo Genes that share expression patterns with IGHV5-78: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for IGHV5-78 Gene

Orthologs for IGHV5-78 Gene

Evolution for IGHV5-78 Gene

ENSEMBL:
Gene Tree for IGHV5-78 (if available)
TreeFam:
Gene Tree for IGHV5-78 (if available)

No data available for Orthologs for IGHV5-78 Gene

Paralogs for IGHV5-78 Gene

No data available for Paralogs for IGHV5-78 Gene

Variants for IGHV5-78 Gene

Relevant External Links for IGHV5-78 Gene

HapMap Linkage Disequilibrium report
IGHV5-78

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV5-78 Gene

Disorders for IGHV5-78 Gene

Relevant External Links for IGHV5-78

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IGHV5-78

No disorders were found for IGHV5-78 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV5-78 Gene

Publications for IGHV5-78 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. Molecular cloning and characterization of the t(2;14) translocation associated with childhood chronic lymphocytic leukemia. (PMID: 1373880) Richardson A.L. … Tucker P.W. (Oncogene 1992) 3
  3. Structure and expression of human germline VH transcripts. (PMID: 1903431) Berman J.E. … Tucker P.W. (J. Exp. Med. 1991) 3
  4. Content and organization of the human Ig VH locus: definition of three new VH families and linkage to the Ig CH locus. (PMID: 3396540) Berman J.E. … Cantor C.R. (EMBO J. 1988) 3

Products for IGHV5-78 Gene

Sources for IGHV5-78 Gene

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