Free for academic non-profit institutions. Other users need a Commercial license

Aliases for IGHV5-78 Gene

Aliases for IGHV5-78 Gene

  • Immunoglobulin Heavy Variable 5-78 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 5-78 Pseudogene 2
  • Immunoglobulin Heavy Variable 5-78 2
  • IGHV578 3
  • 5-78P 3
  • VH5 3

External Ids for IGHV5-78 Gene

Previous GeneCards Identifiers for IGHV5-78 Gene

  • GC14U990143
  • GC14M105231
  • GC14M106330
  • GC14M107258
  • GC14M087411
  • GC14M107264
  • GC14M107363
  • GC14M107519
  • GC14M107711
  • GC14M107015
  • GC14M107753
  • GC14M107846
  • GC14M107945

Summaries for IGHV5-78 Gene

GeneCards Summary for IGHV5-78 Gene

IGHV5-78 (Immunoglobulin Heavy Variable 5-78 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV5-78 Gene

Genomics for IGHV5-78 Gene

Regulatory Elements for IGHV5-78 Gene

Enhancers for IGHV5-78 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F106850 0.9 ENCODE 0.8 +0.2 238 1.3 CTCF TBP RAD51 POLR2A IKZF1 REST EBF1 MIR5195 IGHV5-78
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Promoters for IGHV5-78 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000424880 246 201 TBP CTCF POLR2A IKZF1 EBF1

Genomic Location for IGHV5-78 Gene

106,851,112 bp from pter
106,851,546 bp from pter
435 bases
Minus strand

Genomic View for IGHV5-78 Gene

Genes around IGHV5-78 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV5-78 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV5-78 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV5-78 Gene

Proteins for IGHV5-78 Gene

Post-translational modifications for IGHV5-78 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV5-78 Gene

Domains & Families for IGHV5-78 Gene

Gene Families for IGHV5-78 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV5-78: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV5-78 Gene

Function for IGHV5-78 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV5-78 Gene

Localization for IGHV5-78 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV5-78 Gene

Pathways & Interactions for IGHV5-78 Gene

SuperPathways for IGHV5-78 Gene

No Data Available

Interacting Proteins for IGHV5-78 Gene

Gene Ontology (GO) - Biological Process for IGHV5-78 Gene


No data available for Pathways by source and SIGNOR curated interactions for IGHV5-78 Gene

Transcripts for IGHV5-78 Gene

mRNA/cDNA for IGHV5-78 Gene

(4) Additional mRNA sequences :
(16) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IGHV5-78 Gene

Immunoglobulin heavy variable 5-78 (pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV5-78 Gene

No ASD Table

Relevant External Links for IGHV5-78 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGHV5-78 Gene

mRNA expression in normal human tissues for IGHV5-78 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV5-78 Gene

This gene is overexpressed in Spleen (x8.0), Whole Blood (x5.4), and Small Intestine - Terminal Ileum (x5.1).

SOURCE GeneReport for Unigene cluster for IGHV5-78 Gene:

genes like me logo Genes that share expression patterns with IGHV5-78: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGHV5-78 Gene

Orthologs for IGHV5-78 Gene

Evolution for IGHV5-78 Gene

Gene Tree for IGHV5-78 (if available)
Gene Tree for IGHV5-78 (if available)

No data available for Orthologs for IGHV5-78 Gene

Paralogs for IGHV5-78 Gene

No data available for Paralogs for IGHV5-78 Gene

Variants for IGHV5-78 Gene

Relevant External Links for IGHV5-78 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV5-78 Gene

Disorders for IGHV5-78 Gene

Relevant External Links for IGHV5-78

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for IGHV5-78 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV5-78 Gene

Publications for IGHV5-78 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  2. Molecular cloning and characterization of the t(2;14) translocation associated with childhood chronic lymphocytic leukemia. (PMID: 1373880) Richardson A.L. … Tucker P.W. (Oncogene 1992) 3 64
  3. Structure and expression of human germline VH transcripts. (PMID: 1903431) Berman J.E. … Tucker P.W. (J. Exp. Med. 1991) 3 64
  4. Content and organization of the human Ig VH locus: definition of three new VH families and linkage to the Ig CH locus. (PMID: 3396540) Berman J.E. … Cantor C.R. (EMBO J. 1988) 3 64

Products for IGHV5-78 Gene

Sources for IGHV5-78 Gene

Loading form....