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Aliases for IGHV4-80 Gene

Subcategory (RNA class) for IGHV4-80 Gene

lncRNA

Aliases for IGHV4-80 Gene

  • Immunoglobulin Heavy Variable 4-80 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 4-80 Pseudogene 2
  • Immunoglobulin Heavy Variable 4-80 2
  • IGHV480 3
  • 4-80P 3

External Ids for IGHV4-80 Gene

ORGUL Members for IGHV4-80 Gene

Previous GeneCards Identifiers for IGHV4-80 Gene

  • GC14U990146
  • GC14M105055
  • GC14M105252
  • GC14M106352
  • GC14M107280
  • GC14M106969
  • GC14M107544
  • GC14M107804
  • GC14M107897
  • GC14M107996

Summaries for IGHV4-80 Gene

GeneCards Summary for IGHV4-80 Gene

IGHV4-80 (Immunoglobulin Heavy Variable 4-80 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV4-80 Gene

Genomics for IGHV4-80 Gene

Regulatory Elements for IGHV4-80 Gene

Enhancers for IGHV4-80 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G106872 1.2 Ensembl ENCODE 0.7 0.0 -6 1.6 HDGF PKNOX1 FOXA2 ARID4B ZNF48 GLIS2 ZNF143 FOS SP3 REST IGHV2-70D IGHV4-80 IGHV7-81
GH14G106874 0.2 ENCODE 0.7 -1.3 -1341 0.2 IGHV4-80 IGHV7-81
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHV4-80 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHV4-80 Gene

Chromosome:
14
Start:
106,872,783 bp from pter
End:
106,873,186 bp from pter
Size:
404 bases
Orientation:
Minus strand

Genomic View for IGHV4-80 Gene

Genes around IGHV4-80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV4-80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV4-80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV4-80 Gene

Proteins for IGHV4-80 Gene

Post-translational modifications for IGHV4-80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV4-80 Gene

Domains & Families for IGHV4-80 Gene

Gene Families for IGHV4-80 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV4-80: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV4-80 Gene

Function for IGHV4-80 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV4-80 Gene

Localization for IGHV4-80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV4-80 Gene

Pathways & Interactions for IGHV4-80 Gene

SuperPathways for IGHV4-80 Gene

No Data Available

Interacting Proteins for IGHV4-80 Gene

Gene Ontology (GO) - Biological Process for IGHV4-80 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHV4-80 Gene

Drugs & Compounds for IGHV4-80 Gene

No Compound Related Data Available

Transcripts for IGHV4-80 Gene

mRNA/cDNA for IGHV4-80 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV4-80 Gene

No ASD Table

Relevant External Links for IGHV4-80 Gene

GeneLoc Exon Structure for
IGHV4-80
ECgene alternative splicing isoforms for
IGHV4-80

Expression for IGHV4-80 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV4-80 Gene

genes like me logo Genes that share expression patterns with IGHV4-80: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV4-80 Gene

Orthologs for IGHV4-80 Gene

Evolution for IGHV4-80 Gene

ENSEMBL:
Gene Tree for IGHV4-80 (if available)
TreeFam:
Gene Tree for IGHV4-80 (if available)

No data available for Orthologs for IGHV4-80 Gene

Paralogs for IGHV4-80 Gene

No data available for Paralogs for IGHV4-80 Gene

Variants for IGHV4-80 Gene

Relevant External Links for IGHV4-80 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV4-80

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV4-80 Gene

Disorders for IGHV4-80 Gene

No disorders were found for IGHV4-80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV4-80 Gene

Publications for IGHV4-80 Gene

  1. Human immunoglobulin VH4 sequences resolved by population-based analysis after enzymatic amplification and denaturing gradient gel electrophoresis. (PMID: 10651850) Cui X. … Li H. (Eur. J. Immunogenet. 2000) 3 64
  2. The complete nucleotide sequence of the human immunoglobulin heavy chain variable region locus. (PMID: 9841928) Matsuda F. … Honjo T. (J. Exp. Med. 1998) 3 64

Products for IGHV4-80 Gene

Sources for IGHV4-80 Gene

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