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Aliases for IGHV4-80 Gene

Subcategory (RNA class) for IGHV4-80 Gene

lncRNA

Aliases for IGHV4-80 Gene

  • Immunoglobulin Heavy Variable 4-80 (Pseudogene) 2 3
  • Immunoglobulin Heavy Variable 4-80 Pseudogene 2
  • Immunoglobulin Heavy Variable 4-80 2
  • IGHV480 3
  • 4-80P 3

External Ids for IGHV4-80 Gene

ORGUL Members for IGHV4-80 Gene

Previous GeneCards Identifiers for IGHV4-80 Gene

  • GC14U990146
  • GC14M105055
  • GC14M105252
  • GC14M106352
  • GC14M107280
  • GC14M106969
  • GC14M107544
  • GC14M107804
  • GC14M107897
  • GC14M107996
  • GC14M108117
  • GC14M108258

Summaries for IGHV4-80 Gene

GeneCards Summary for IGHV4-80 Gene

IGHV4-80 (Immunoglobulin Heavy Variable 4-80 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for IGHV4-80 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV4-80 Gene

Genomics for IGHV4-80 Gene

GeneHancer (GH) Regulatory Elements for IGHV4-80 Gene

Promoters and enhancers for IGHV4-80 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I106872 Enhancer 1.1 Ensembl ENCODE 550.8 0.0 -5 1.6 HDGF PKNOX1 FOXA2 ARID4B NEUROD1 ZNF48 GLIS2 ZNF143 FOS RUNX3 IGHV4-80 IGHV7-81 IGHV2-70D IGH
GH14I106874 Enhancer 0.4 ENCODE 550.8 -1.3 -1341 0.2 POLR2A RUNX3 IGHV4-80 IGHV7-81 IGH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IGHV4-80 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGHV4-80 Gene

Genomic Locations for IGHV4-80 Gene
chr14:106,872,783-106,873,186
(GRCh38/hg38)
Size:
404 bases
Orientation:
Minus strand
chr14:107,280,994-107,281,394
(GRCh37/hg19)

Genomic View for IGHV4-80 Gene

Genes around IGHV4-80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV4-80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV4-80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV4-80 Gene

Proteins for IGHV4-80 Gene

Post-translational modifications for IGHV4-80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV4-80 Gene

Domains & Families for IGHV4-80 Gene

Gene Families for IGHV4-80 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV4-80: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV4-80 Gene

Function for IGHV4-80 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV4-80 Gene

Localization for IGHV4-80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGHV4-80 Gene

Pathways & Interactions for IGHV4-80 Gene

SuperPathways for IGHV4-80 Gene

No Data Available

Interacting Proteins for IGHV4-80 Gene

Gene Ontology (GO) - Biological Process for IGHV4-80 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHV4-80 Gene

Drugs & Compounds for IGHV4-80 Gene

No Compound Related Data Available

Transcripts for IGHV4-80 Gene

mRNA/cDNA for IGHV4-80 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV4-80 Gene

No ASD Table

Relevant External Links for IGHV4-80 Gene

GeneLoc Exon Structure for
IGHV4-80
ECgene alternative splicing isoforms for
IGHV4-80

Expression for IGHV4-80 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV4-80 Gene

genes like me logo Genes that share expression patterns with IGHV4-80: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV4-80 Gene

Orthologs for IGHV4-80 Gene

Evolution for IGHV4-80 Gene

ENSEMBL:
Gene Tree for IGHV4-80 (if available)
TreeFam:
Gene Tree for IGHV4-80 (if available)

No data available for Orthologs for IGHV4-80 Gene

Paralogs for IGHV4-80 Gene

No data available for Paralogs for IGHV4-80 Gene

Variants for IGHV4-80 Gene

Additional Variant Information for IGHV4-80 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV4-80

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV4-80 Gene

Disorders for IGHV4-80 Gene

No disorders were found for IGHV4-80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV4-80 Gene

Publications for IGHV4-80 Gene

  1. Human immunoglobulin VH4 sequences resolved by population-based analysis after enzymatic amplification and denaturing gradient gel electrophoresis. (PMID: 10651850) Cui X … Li H (European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics 2000) 3 58
  2. The complete nucleotide sequence of the human immunoglobulin heavy chain variable region locus. (PMID: 9841928) Matsuda F … Honjo T (The Journal of experimental medicine 1998) 3 58

Products for IGHV4-80 Gene

Sources for IGHV4-80 Gene

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