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Aliases for IGHV3OR16-13 Gene

Aliases for IGHV3OR16-13 Gene

  • Immunoglobulin Heavy Variable 3/OR16-13 (Non-Functional) 2 3
  • Immunoglobulin Heavy Variable 3/OR16-13 2
  • IGHV3/OR16-13 3
  • IGHV3OR1613 3

External Ids for IGHV3OR16-13 Gene

Previous GeneCards Identifiers for IGHV3OR16-13 Gene

  • GC16U990109
  • GC16P033631

Summaries for IGHV3OR16-13 Gene

GeneCards Summary for IGHV3OR16-13 Gene

IGHV3OR16-13 (Immunoglobulin Heavy Variable 3/OR16-13 (Non-Functional)) is a Pseudogene. An important paralog of this gene is IGHV3OR16-9.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV3OR16-13 Gene

Genomics for IGHV3OR16-13 Gene

Genomic Location for IGHV3OR16-13 Gene

Start:
33,827,214 bp from pter
End:
33,827,661 bp from pter
Size:
448 bases
Orientation:
Plus strand

Genomic View for IGHV3OR16-13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IGHV3OR16-13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV3OR16-13 Gene

No data available for Regulatory Elements for IGHV3OR16-13 Gene

Proteins for IGHV3OR16-13 Gene

  • Protein details for IGHV3OR16-13 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B7E8
    Recommended name:
    Protein IGHV3OR16-13
    Protein Accession:
    A0A075B7E8
    Secondary Accessions:

    Protein attributes for IGHV3OR16-13 Gene

    Size:
    117 amino acids
    Molecular mass:
    12904 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV3OR16-13 Gene

Proteomics data for IGHV3OR16-13 Gene at MOPED

Post-translational modifications for IGHV3OR16-13 Gene

No Post-translational modifications

Other Protein References for IGHV3OR16-13 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV3OR16-13 Gene

Domains for IGHV3OR16-13 Gene

Gene Families for IGHV3OR16-13 Gene

HGNC:
  • IGHO :Immunoglobulins / IGH orphons

Protein Domains for IGHV3OR16-13 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV3OR16-13: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV3OR16-13 Gene

Function for IGHV3OR16-13 Gene

Gene Ontology (GO) - Molecular Function for IGHV3OR16-13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with IGHV3OR16-13: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IGHV3OR16-13 Gene

Localization for IGHV3OR16-13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV3OR16-13 Gene

Pathways for IGHV3OR16-13 Gene

SuperPathways for IGHV3OR16-13 Gene

No Data Available

Interacting Proteins for IGHV3OR16-13 Gene

Gene Ontology (GO) - Biological Process for IGHV3OR16-13 Gene

None

No data available for Pathways by source for IGHV3OR16-13 Gene

Transcripts for IGHV3OR16-13 Gene

mRNA/cDNA for IGHV3OR16-13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate IGHV3OR16-13
    • Block miRNA regulation of IGHV3OR16-13 using miScript Target Protectors

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for IGHV3OR16-13 Gene

    No ASD Table

    Relevant External Links for IGHV3OR16-13 Gene

    GeneLoc Exon Structure for
    IGHV3OR16-13
    ECgene alternative splicing isoforms for
    IGHV3OR16-13

    Expression for IGHV3OR16-13 Gene

    mRNA expression in normal human tissues for IGHV3OR16-13 Gene

    genes like me logo Genes that share expressions with IGHV3OR16-13: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for IGHV3OR16-13 Gene

    Orthologs for IGHV3OR16-13 Gene

    This gene was present in the common ancestor of mammals.

    Orthologs for IGHV3OR16-13 Gene

    Organism Taxonomy Gene Similarity Type Details
    dog
    (Canis familiaris)
    Mammalia -- 36
    • 67 (a)
    ManyToMany
    Species with no ortholog for IGHV3OR16-13:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • chimpanzee (Pan troglodytes)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • mouse (Mus musculus)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for IGHV3OR16-13 Gene

    ENSEMBL:
    Gene Tree for IGHV3OR16-13 (if available)
    TreeFam:
    Gene Tree for IGHV3OR16-13 (if available)

    Paralogs for IGHV3OR16-13 Gene

    genes like me logo Genes that share paralogs with IGHV3OR16-13: view

    Variants for IGHV3OR16-13 Gene

    Relevant External Links for IGHV3OR16-13 Gene

    HapMap Linkage Disequilibrium report
    IGHV3OR16-13

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for IGHV3OR16-13 Gene

    Disorders for IGHV3OR16-13 Gene

    No disorders were found for IGHV3OR16-13 Gene.

    No data available for UniProtKB/Swiss-Prot for IGHV3OR16-13 Gene

    Publications for IGHV3OR16-13 Gene

    1. Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. (PMID: 7951227) Tomlinson I.M. … Winter G. (Hum. Mol. Genet. 1994) 3

    Products for IGHV3OR16-13 Gene

    Sources for IGHV3OR16-13 Gene

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