Free for academic non-profit institutions. Other users need a Commercial license

Aliases for IGHV3-47 Gene

Aliases for IGHV3-47 Gene

  • Immunoglobulin Heavy Variable 3-47 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 3-47 Pseudogene 2
  • Immunoglobulin Heavy Variable 3-47 2
  • IGHV347 3
  • 3-47P 3

External Ids for IGHV3-47 Gene

Previous GeneCards Identifiers for IGHV3-47 Gene

  • GC14U990181
  • GC14M104946
  • GC14M106046
  • GC14M106047
  • GC14M106975
  • GC14M106978
  • GC14M107000
  • GC14M107474
  • GC14M107666
  • GC14M106571
  • GC14M107045
  • GC14M107769
  • GC14M107862
  • GC14M107961
  • GC14M108083

Summaries for IGHV3-47 Gene

GeneCards Summary for IGHV3-47 Gene

IGHV3-47 (Immunoglobulin Heavy Variable 3-47 (Pseudogene)) is a Pseudogene.

Additional gene information for IGHV3-47 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV3-47 Gene

Genomics for IGHV3-47 Gene

Regulatory Elements for IGHV3-47 Gene

Enhancers for IGHV3-47 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H106517 0.9 ENCODE dbSUPER 0.7 +0.6 635 1.3 SMARCA5 CTCF RB1 CEBPB TRIM22 EBF1 CEBPG RAD21 IKZF1 ZNF143 IGHV3-47 IGHVII-46-1
GH14H106531 0.9 ENCODE dbSUPER 0.4 -12.0 -11962 0.1 CTCF RB1 TRIM22 EBF1 RAD21 IKZF1 ZNF143 NBN MLLT1 RUNX3 IGHVIII-47-1 IGHV3-47
GH14H106530 0.7 ENCODE 0.4 -11.6 -11630 0.1 SMARCA5 CTCF RB1 TRIM22 ELF1 RAD21 EED IKZF1 NBN ZNF143 IGHVIII-47-1 IGHV3-47
GH14H106520 0.5 dbSUPER 0.4 -5.1 -5050 7.7 ZNF680 CREB1 EBF1 ATF7 ATF2 IGHV3-53 IGHV3-47 IGHVIII-47-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHV3-47 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGHV3-47 Gene

Genomic Locations for IGHV3-47 Gene
456 bases
Minus strand

Genomic View for IGHV3-47 Gene

Genes around IGHV3-47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV3-47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV3-47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV3-47 Gene

Proteins for IGHV3-47 Gene

Post-translational modifications for IGHV3-47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV3-47 Gene

Domains & Families for IGHV3-47 Gene

Gene Families for IGHV3-47 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV3-47: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV3-47 Gene

Function for IGHV3-47 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV3-47 Gene

Localization for IGHV3-47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGHV3-47 Gene

Pathways & Interactions for IGHV3-47 Gene

SuperPathways for IGHV3-47 Gene

No Data Available

Interacting Proteins for IGHV3-47 Gene

Gene Ontology (GO) - Biological Process for IGHV3-47 Gene


No data available for Pathways by source and SIGNOR curated interactions for IGHV3-47 Gene

Drugs & Compounds for IGHV3-47 Gene

No Compound Related Data Available

Transcripts for IGHV3-47 Gene

mRNA/cDNA for IGHV3-47 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV3-47 Gene

No ASD Table

Relevant External Links for IGHV3-47 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGHV3-47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV3-47 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV3-47 Gene

This gene is overexpressed in Testis (x36.2), Colon - Transverse (x8.4), and Spleen (x8.3).
genes like me logo Genes that share expression patterns with IGHV3-47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV3-47 Gene

Orthologs for IGHV3-47 Gene

Evolution for IGHV3-47 Gene

Gene Tree for IGHV3-47 (if available)
Gene Tree for IGHV3-47 (if available)

No data available for Orthologs for IGHV3-47 Gene

Paralogs for IGHV3-47 Gene

No data available for Paralogs for IGHV3-47 Gene

Variants for IGHV3-47 Gene

Relevant External Links for IGHV3-47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV3-47 Gene

Disorders for IGHV3-47 Gene

No disorders were found for IGHV3-47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV3-47 Gene

Publications for IGHV3-47 Gene

  1. Analysis of somatic hypermutation in X-linked hyper-IgM syndrome shows specific deficiencies in mutational targeting. (PMID: 19023113) Longo NS … Lipsky PE (Blood 2009) 3 60
  2. Origin of nodular lymphocyte-predominant Hodgkin's disease from a clonal expansion of highly mutated germinal-center B cells. (PMID: 9250847) Marafioti T … Stein H (The New England journal of medicine 1997) 3 60
  3. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson IM … Winter G (Journal of molecular biology 1992) 3 60

Products for IGHV3-47 Gene

Sources for IGHV3-47 Gene

Loading form....