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Aliases for IGHV3-42 Gene

Subcategory (RNA class) for IGHV3-42 Gene


Aliases for IGHV3-42 Gene

  • Immunoglobulin Heavy Variable 3-42 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 3-42 Pseudogene 2
  • Immunoglobulin Heavy Variable 3-42 2
  • IGHV342 3
  • 3-42P 3

External Ids for IGHV3-42 Gene

ORGUL Members for IGHV3-42 Gene

Previous GeneCards Identifiers for IGHV3-42 Gene

  • GC14U990183
  • GC14M104890
  • GC14M105990
  • GC14M106920
  • GC14M087049
  • GC14M106922
  • GC14M107313
  • GC14M107458
  • GC14M107650
  • GC14M106563
  • GC14M106678
  • GC14M107761
  • GC14M107854

Summaries for IGHV3-42 Gene

GeneCards Summary for IGHV3-42 Gene

IGHV3-42 (Immunoglobulin Heavy Variable 3-42 (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV3-42 Gene

Genomics for IGHV3-42 Gene

Regulatory Elements for IGHV3-42 Gene

Enhancers for IGHV3-42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F105562 0.8 FANTOM5 Ensembl ENCODE 16.2 +890.9 890866 20.7 HDGF ZNF493 ZNF133 SIN3A YBX1 GLI4 ZNF48 ZNF2 GLIS2 ZNF143 IGHVIII-11-1 HOMER2P2 ENSG00000271201 IGHV3-42 IGHVII-33-1 HOMER2P1 ENSG00000257270 TMEM121 IGHE ELK2BP
GH14F105479 1.2 ENCODE 16.2 +977.7 977688 13.2 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 IGHVIII-11-1 IGHVII-33-1 ENSG00000271201 HOMER2P1 IGHV3-42 HOMER2P2 TMEM121 MTA1 ENSG00000257270 C14orf79
GH14F105470 0.2 ENCODE 16.2 +989.4 989375 8.0 HDGF PKNOX1 ZFP64 ARID4B SIN3A ZNF2 YY1 GLIS2 KLF7 KLF13 IGHVIII-11-1 HOMER2P2 IGHVII-33-1 ENSG00000271201 HOMER2P1 IGHV3-42 TMEM121 ENSG00000258811 ENSG00000257270 LOC102723354
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IGHV3-42 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHV3-42 Gene

106,463,254 bp from pter
106,463,691 bp from pter
438 bases
Minus strand

Genomic View for IGHV3-42 Gene

Genes around IGHV3-42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV3-42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV3-42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV3-42 Gene

Proteins for IGHV3-42 Gene

Post-translational modifications for IGHV3-42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV3-42 Gene

Domains & Families for IGHV3-42 Gene

Gene Families for IGHV3-42 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV3-42: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV3-42 Gene

Function for IGHV3-42 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV3-42 Gene

Localization for IGHV3-42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV3-42 Gene

Pathways & Interactions for IGHV3-42 Gene

SuperPathways for IGHV3-42 Gene

No Data Available

Interacting Proteins for IGHV3-42 Gene

Gene Ontology (GO) - Biological Process for IGHV3-42 Gene


No data available for Pathways by source and SIGNOR curated interactions for IGHV3-42 Gene

Transcripts for IGHV3-42 Gene

mRNA/cDNA for IGHV3-42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV3-42 Gene

No ASD Table

Relevant External Links for IGHV3-42 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGHV3-42 Gene

mRNA expression in normal human tissues for IGHV3-42 Gene

genes like me logo Genes that share expression patterns with IGHV3-42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IGHV3-42 Gene

Orthologs for IGHV3-42 Gene

Evolution for IGHV3-42 Gene

Gene Tree for IGHV3-42 (if available)
Gene Tree for IGHV3-42 (if available)

No data available for Orthologs for IGHV3-42 Gene

Paralogs for IGHV3-42 Gene

No data available for Paralogs for IGHV3-42 Gene

Variants for IGHV3-42 Gene

Relevant External Links for IGHV3-42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV3-42 Gene

Disorders for IGHV3-42 Gene

No disorders were found for IGHV3-42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV3-42 Gene

Publications for IGHV3-42 Gene

  1. Structure and physical map of 64 variable segments in the 3'0.8-megabase region of the human immunoglobulin heavy-chain locus. (PMID: 8490662) Matsuda F. … Anand R. (Nat. Genet. 1993) 3 64

Products for IGHV3-42 Gene

Sources for IGHV3-42 Gene

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