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Aliases for IGHV2OR16-5 Gene

Aliases for IGHV2OR16-5 Gene

  • Immunoglobulin Heavy Variable 2/OR16-5 (Non-Functional) 2 3 5
  • Immunoglobulin Heavy Variable 2/OR16-5 2
  • IGHV2/OR16-5 3
  • IGHV2OR165 3

External Ids for IGHV2OR16-5 Gene

Previous GeneCards Identifiers for IGHV2OR16-5 Gene

  • GC16U990117
  • GC16P032769

Summaries for IGHV2OR16-5 Gene

GeneCards Summary for IGHV2OR16-5 Gene

IGHV2OR16-5 (Immunoglobulin Heavy Variable 2/OR16-5 (Non-Functional)) is a Pseudogene. An important paralog of this gene is IGHV2-26.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV2OR16-5 Gene

Genomics for IGHV2OR16-5 Gene

Genomic Location for IGHV2OR16-5 Gene

Chromosome:
16
Start:
32,847,713 bp from pter
End:
32,848,156 bp from pter
Size:
444 bases
Orientation:
Plus strand

Genomic View for IGHV2OR16-5 Gene

Genes around IGHV2OR16-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV2OR16-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV2OR16-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements and RefSeq DNA sequence for IGHV2OR16-5 Gene

Proteins for IGHV2OR16-5 Gene

  • Protein details for IGHV2OR16-5 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0B4J2B6
    Recommended name:
    Immunoglobulin heavy variable 2/OR16-5 (non-functional)
    Protein Accession:
    A0A0B4J2B6

    Protein attributes for IGHV2OR16-5 Gene

    Size:
    119 amino acids
    Molecular mass:
    13199 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV2OR16-5 Gene

Post-translational modifications for IGHV2OR16-5 Gene

No Post-translational modifications

Other Protein References for IGHV2OR16-5 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV2OR16-5 Gene

Domains & Families for IGHV2OR16-5 Gene

Gene Families for IGHV2OR16-5 Gene

Protein Domains for IGHV2OR16-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV2OR16-5: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV2OR16-5 Gene

Function for IGHV2OR16-5 Gene

Gene Ontology (GO) - Molecular Function for IGHV2OR16-5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0034987 immunoglobulin receptor binding IBA --
genes like me logo Genes that share ontologies with IGHV2OR16-5: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV2OR16-5 Gene

Localization for IGHV2OR16-5 Gene

Gene Ontology (GO) - Cellular Components for IGHV2OR16-5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0009897 external side of plasma membrane IBA --
GO:0042571 immunoglobulin complex, circulating IBA --
GO:0072562 blood microparticle IBA --
genes like me logo Genes that share ontologies with IGHV2OR16-5: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for IGHV2OR16-5 Gene

Pathways & Interactions for IGHV2OR16-5 Gene

SuperPathways for IGHV2OR16-5 Gene

No Data Available

Interacting Proteins for IGHV2OR16-5 Gene

Gene Ontology (GO) - Biological Process for IGHV2OR16-5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006910 phagocytosis, recognition IBA --
GO:0006911 phagocytosis, engulfment IBA --
GO:0006958 complement activation, classical pathway IBA --
GO:0042742 defense response to bacterium IBA --
GO:0045087 innate immune response IBA --
genes like me logo Genes that share ontologies with IGHV2OR16-5: view

No data available for Pathways by source and SIGNOR curated interactions for IGHV2OR16-5 Gene

Drugs & Compounds for IGHV2OR16-5 Gene

No Compound Related Data Available

Transcripts for IGHV2OR16-5 Gene

mRNA/cDNA for IGHV2OR16-5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV2OR16-5 Gene

No ASD Table

Relevant External Links for IGHV2OR16-5 Gene

GeneLoc Exon Structure for
IGHV2OR16-5
ECgene alternative splicing isoforms for
IGHV2OR16-5

Expression for IGHV2OR16-5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV2OR16-5 Gene

genes like me logo Genes that share expression patterns with IGHV2OR16-5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV2OR16-5 Gene

Orthologs for IGHV2OR16-5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IGHV2OR16-5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 99 (a)
OneToMany
-- 35
  • 98 (a)
OneToMany
-- 35
  • 98 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 46 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 35
  • 26 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 51 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii ighv5-1 35
  • 38 (a)
ManyToMany
ighv5-5 35
  • 38 (a)
ManyToMany
ighv5-7 35
  • 38 (a)
ManyToMany
ighv5-2 35
  • 37 (a)
ManyToMany
ighv5-3 35
  • 37 (a)
ManyToMany
ighv5-4 35
  • 37 (a)
ManyToMany
ighv8-2 35
  • 37 (a)
ManyToMany
ighv8-4 35
  • 37 (a)
ManyToMany
ighv5-8 35
  • 36 (a)
ManyToMany
ighv8-3 35
  • 36 (a)
ManyToMany
ighv8-1 35
  • 34 (a)
ManyToMany
ighv7-1 35
  • 33 (a)
ManyToMany
Species where no ortholog for IGHV2OR16-5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IGHV2OR16-5 Gene

ENSEMBL:
Gene Tree for IGHV2OR16-5 (if available)
TreeFam:
Gene Tree for IGHV2OR16-5 (if available)

Paralogs for IGHV2OR16-5 Gene

Pseudogenes.org Pseudogenes for IGHV2OR16-5 Gene

genes like me logo Genes that share paralogs with IGHV2OR16-5: view

Variants for IGHV2OR16-5 Gene

Relevant External Links for IGHV2OR16-5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV2OR16-5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV2OR16-5 Gene

Disorders for IGHV2OR16-5 Gene

No disorders were found for IGHV2OR16-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV2OR16-5 Gene

Publications for IGHV2OR16-5 Gene

  1. Recent translocation of variable and diversity segments of the human immunoglobulin heavy chain from chromosome 14 to chromosomes 15 and 16. (PMID: 7959766) Nagaoka H. … Anand R. (Genomics 1994) 3 64

Products for IGHV2OR16-5 Gene

Sources for IGHV2OR16-5 Gene

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