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Aliases for IGHV1OR21-1 Gene

Aliases for IGHV1OR21-1 Gene

  • Immunoglobulin Heavy Variable 1/OR21-1 (Non-Functional) 2 3 5
  • Immunoglobulin Heavy Variable 1/OR21-1 Pseudogene 2 3
  • IGHV1/OR21-1 3

External Ids for IGHV1OR21-1 Gene

Previous GeneCards Identifiers for IGHV1OR21-1 Gene

  • GC21P010862

Summaries for IGHV1OR21-1 Gene

GeneCards Summary for IGHV1OR21-1 Gene

IGHV1OR21-1 (Immunoglobulin Heavy Variable 1/OR21-1 (Non-Functional)) is a Pseudogene. An important paralog of this gene is IGHV1OR15-9.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV1OR21-1 Gene

Genomics for IGHV1OR21-1 Gene

Regulatory Elements for IGHV1OR21-1 Gene

Enhancers for IGHV1OR21-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F010660 0.3 FANTOM5 0.4 -10.4 -10372 0.3 IGHV1OR21-1
GH21F010733 0.2 ENCODE 0.2 -83.4 -83447 0.2 IGHV1OR21-1
GH21F010731 0.2 ENCODE 0.2 -82.1 -82107 0.3 IGHV1OR21-1
GH21F010700 0.2 ENCODE 0.2 -51.0 -51017 0.1 IGHV1OR21-1
GH21F010722 0.2 ENCODE 0.2 -73.1 -73126 0.1 IGHV1OR21-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHV1OR21-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHV1OR21-1 Gene

Chromosome:
21
Start:
10,649,390 bp from pter
End:
10,649,835 bp from pter
Size:
446 bases
Orientation:
Minus strand

Genomic View for IGHV1OR21-1 Gene

Genes around IGHV1OR21-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV1OR21-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV1OR21-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV1OR21-1 Gene

Proteins for IGHV1OR21-1 Gene

  • Protein details for IGHV1OR21-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WYE8
    Recommended name:
    Putative V-set and immunoglobulin domain-containing-like protein IGHV1OR21-1
    Protein Accession:
    A0A087WYE8

    Protein attributes for IGHV1OR21-1 Gene

    Size:
    117 amino acids
    Molecular mass:
    13023 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV1OR21-1 Gene

Post-translational modifications for IGHV1OR21-1 Gene

No Post-translational modifications

Other Protein References for IGHV1OR21-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV1OR21-1 Gene

Domains & Families for IGHV1OR21-1 Gene

Gene Families for IGHV1OR21-1 Gene

Protein Domains for IGHV1OR21-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV1OR21-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV1OR21-1 Gene

Function for IGHV1OR21-1 Gene

Phenotypes for IGHV1OR21-1 Gene

GenomeRNAi human phenotypes for IGHV1OR21-1:
genes like me logo Genes that share phenotypes with IGHV1OR21-1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV1OR21-1 Gene

Localization for IGHV1OR21-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IGHV1OR21-1 Gene

Pathways & Interactions for IGHV1OR21-1 Gene

SuperPathways for IGHV1OR21-1 Gene

No Data Available

Interacting Proteins for IGHV1OR21-1 Gene

Gene Ontology (GO) - Biological Process for IGHV1OR21-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGHV1OR21-1 Gene

Transcripts for IGHV1OR21-1 Gene

mRNA/cDNA for IGHV1OR21-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV1OR21-1 Gene

No ASD Table

Relevant External Links for IGHV1OR21-1 Gene

GeneLoc Exon Structure for
IGHV1OR21-1
ECgene alternative splicing isoforms for
IGHV1OR21-1

Expression for IGHV1OR21-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGHV1OR21-1 Gene

Protein differential expression in normal tissues from HIPED for IGHV1OR21-1 Gene

This gene is overexpressed in Cervix (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for IGHV1OR21-1 Gene



Protein tissue co-expression partners for IGHV1OR21-1 Gene

genes like me logo Genes that share expression patterns with IGHV1OR21-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for IGHV1OR21-1 Gene

Orthologs for IGHV1OR21-1 Gene

Evolution for IGHV1OR21-1 Gene

ENSEMBL:
Gene Tree for IGHV1OR21-1 (if available)
TreeFam:
Gene Tree for IGHV1OR21-1 (if available)

No data available for Orthologs for IGHV1OR21-1 Gene

Paralogs for IGHV1OR21-1 Gene

Variants for IGHV1OR21-1 Gene

Relevant External Links for IGHV1OR21-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV1OR21-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV1OR21-1 Gene

Disorders for IGHV1OR21-1 Gene

Relevant External Links for IGHV1OR21-1

Genetic Association Database (GAD)
IGHV1OR21-1
Human Genome Epidemiology (HuGE) Navigator
IGHV1OR21-1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IGHV1OR21-1

No disorders were found for IGHV1OR21-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV1OR21-1 Gene

Publications for IGHV1OR21-1 Gene

  1. IgE transcripts in the circulation of allergic children reflect a classical antigen-driven B cell response and not a superantigen-like activation. (PMID: 20660349) Kerzel S. … Zemlin M. (J. Immunol. 2010) 3 64
  2. Genetic associations of variants in genes encoding HIV-dependency factors required for HIV-1 infection. (PMID: 21083371) Chinn L.W. … O'Brien S.J. (J. Infect. Dis. 2010) 46 64
  3. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64
  4. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson I.M. … Winter G. (J. Mol. Biol. 1992) 3 64
  5. A new human immunoglobulin VH family preferentially rearranged in immature B-cell tumours. (PMID: 3123998) Humphries C.G. … Tucker P.W. (Nature 1988) 3 64

Products for IGHV1OR21-1 Gene

Sources for IGHV1OR21-1 Gene

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