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Aliases for IGHV1OR21-1 Gene

Aliases for IGHV1OR21-1 Gene

  • Immunoglobulin Heavy Variable 1/OR21-1 (Non-Functional) 2 3 5
  • Immunoglobulin Heavy Variable 1/OR21-1 Pseudogene 2 3
  • IGHV1/OR21-1 3

External Ids for IGHV1OR21-1 Gene

Previous GeneCards Identifiers for IGHV1OR21-1 Gene

  • GC21P010862

Summaries for IGHV1OR21-1 Gene

GeneCards Summary for IGHV1OR21-1 Gene

IGHV1OR21-1 (Immunoglobulin Heavy Variable 1/OR21-1 (Non-Functional)) is a Pseudogene. An important paralog of this gene is IGHV1OR15-9.

Additional gene information for IGHV1OR21-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV1OR21-1 Gene

Genomics for IGHV1OR21-1 Gene

Regulatory Elements for IGHV1OR21-1 Gene

Enhancers for IGHV1OR21-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H010660 0.3 FANTOM5 0.4 -10.4 -10372 0.3 IGHV1OR21-1
GH21H010700 0.2 ENCODE 0.2 -51.0 -51017 0.1 IGHV1OR21-1
GH21H010709 0.2 ENCODE 0.2 -59.6 -59617 0.1 IGHV1OR21-1
GH21H010708 0.2 ENCODE 0.2 -58.7 -58701 0.7 IGHV1OR21-1
GH21H010713 0.2 ENCODE 0.2 -64.1 -64077 0.1 IGHV1OR21-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHV1OR21-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGHV1OR21-1 Gene

Genomic Locations for IGHV1OR21-1 Gene
446 bases
Minus strand

Genomic View for IGHV1OR21-1 Gene

Genes around IGHV1OR21-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV1OR21-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV1OR21-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV1OR21-1 Gene

Proteins for IGHV1OR21-1 Gene

  • Protein details for IGHV1OR21-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Immunoglobulin heavy variable 1/OR21-1 (non-functional)
    Protein Accession:

    Protein attributes for IGHV1OR21-1 Gene

    117 amino acids
    Molecular mass:
    13023 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV1OR21-1 Gene

Post-translational modifications for IGHV1OR21-1 Gene

No Post-translational modifications

Other Protein References for IGHV1OR21-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV1OR21-1 Gene

Domains & Families for IGHV1OR21-1 Gene

Gene Families for IGHV1OR21-1 Gene

Protein Domains for IGHV1OR21-1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV1OR21-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV1OR21-1 Gene

Function for IGHV1OR21-1 Gene

Phenotypes for IGHV1OR21-1 Gene

GenomeRNAi human phenotypes for IGHV1OR21-1:
genes like me logo Genes that share phenotypes with IGHV1OR21-1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV1OR21-1 Gene

Localization for IGHV1OR21-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGHV1OR21-1 Gene

Pathways & Interactions for IGHV1OR21-1 Gene

SuperPathways for IGHV1OR21-1 Gene

No Data Available

Interacting Proteins for IGHV1OR21-1 Gene

Gene Ontology (GO) - Biological Process for IGHV1OR21-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for IGHV1OR21-1 Gene

Drugs & Compounds for IGHV1OR21-1 Gene

No Compound Related Data Available

Transcripts for IGHV1OR21-1 Gene

mRNA/cDNA for IGHV1OR21-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV1OR21-1 Gene

No ASD Table

Relevant External Links for IGHV1OR21-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGHV1OR21-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV1OR21-1 Gene

Protein differential expression in normal tissues from HIPED for IGHV1OR21-1 Gene

This gene is overexpressed in Cervix (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for IGHV1OR21-1 Gene

Protein tissue co-expression partners for IGHV1OR21-1 Gene

genes like me logo Genes that share expression patterns with IGHV1OR21-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV1OR21-1 Gene

Orthologs for IGHV1OR21-1 Gene

Evolution for IGHV1OR21-1 Gene

Gene Tree for IGHV1OR21-1 (if available)
Gene Tree for IGHV1OR21-1 (if available)

No data available for Orthologs for IGHV1OR21-1 Gene

Paralogs for IGHV1OR21-1 Gene

Variants for IGHV1OR21-1 Gene

Relevant External Links for IGHV1OR21-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV1OR21-1 Gene

Disorders for IGHV1OR21-1 Gene

Relevant External Links for IGHV1OR21-1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for IGHV1OR21-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV1OR21-1 Gene

Publications for IGHV1OR21-1 Gene

  1. IgE transcripts in the circulation of allergic children reflect a classical antigen-driven B cell response and not a superantigen-like activation. (PMID: 20660349) Kerzel S … Zemlin M (Journal of immunology (Baltimore, Md. : 1950) 2010) 3 60
  2. Genetic associations of variants in genes encoding HIV-dependency factors required for HIV-1 infection. (PMID: 21083371) Chinn LW … O'Brien SJ (The Journal of infectious diseases 2010) 45 60
  3. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3 60
  4. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson IM … Winter G (Journal of molecular biology 1992) 3 60
  5. A new human immunoglobulin VH family preferentially rearranged in immature B-cell tumours. (PMID: 3123998) Humphries CG … Tucker PW (Nature 1988) 3 60

Products for IGHV1OR21-1 Gene

Sources for IGHV1OR21-1 Gene

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