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Aliases for IGHV1OR15-1 Gene

Aliases for IGHV1OR15-1 Gene

  • Immunoglobulin Heavy Variable 1/OR15-1 (Non-Functional) 2 3 5
  • Immunoglobulin Heavy Variable 1/OR15-1 Pseudogene 2 3
  • Immunoglobulin Heavy Variable 1/OR15-1 (Pseudogene) 2
  • Immunoglobulin Heavy Variable 1/OR15-1 2
  • IGHV1/OR15-1 3
  • IGHV1OR151 3

External Ids for IGHV1OR15-1 Gene

Previous GeneCards Identifiers for IGHV1OR15-1 Gene

  • GC15U990092
  • GC15M019951
  • GC15M022448

Summaries for IGHV1OR15-1 Gene

GeneCards Summary for IGHV1OR15-1 Gene

IGHV1OR15-1 (Immunoglobulin Heavy Variable 1/OR15-1 (Non-Functional)) is a Pseudogene. GO annotations related to this gene include antigen binding. An important paralog of this gene is LOC102724760.

Additional gene information for IGHV1OR15-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV1OR15-1 Gene

Genomics for IGHV1OR15-1 Gene

Regulatory Elements for IGHV1OR15-1 Gene

Enhancers for IGHV1OR15-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H022157 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.3 -257 6.6 PKNOX1 RB1 BACH1 EBF1 FOXK2 POLR2A EED ZNF143 ZNF207 FOS OR4N4 IGHV1OR15-1 GC15M022187
GH15H022173 1.2 ENCODE dbSUPER 0.4 -12.5 -12529 1.2 PKNOX1 TBL1XR1 RB1 BMI1 RAD21 CHAMP1 EGR1 ZNF143 ZNF207 ATF7 GC15M022187 IGHV1OR15-1
GH15H022177 1.1 Ensembl ENCODE dbSUPER 0.4 -18.2 -18152 3.4 CTCF ZNF654 RB1 TRIM22 USF2 REST GC15M022187 IGHV1OR15-1
GH15H022154 1 ENCODE dbSUPER 0.4 +5.4 5393 2 HDAC1 PKNOX1 LEF1 TAL1 TCF12 ZNF316 CTBP1 NCOR1 NFE2 TRIM24 RPS8P10 IGHV1OR15-1
GH15H022174 1 ENCODE dbSUPER 0.4 -13.4 -13371 0.2 SMARCA5 CTCF RB1 CBFB IRF3 TRIM22 RAD21 ZNF592 ZNF217 SP1 GC15M022187 IGHV1OR15-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IGHV1OR15-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGHV1OR15-1 Gene

Genomic Locations for IGHV1OR15-1 Gene
647 bases
Minus strand

Genomic View for IGHV1OR15-1 Gene

Genes around IGHV1OR15-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV1OR15-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV1OR15-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV1OR15-1 Gene

Proteins for IGHV1OR15-1 Gene

  • Protein details for IGHV1OR15-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Immunoglobulin heavy variable 1/OR15-1 (non-functional)
    Protein Accession:

    Protein attributes for IGHV1OR15-1 Gene

    117 amino acids
    Molecular mass:
    13012 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV1OR15-1 Gene

Post-translational modifications for IGHV1OR15-1 Gene

No Post-translational modifications

Other Protein References for IGHV1OR15-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV1OR15-1 Gene

Domains & Families for IGHV1OR15-1 Gene

Gene Families for IGHV1OR15-1 Gene

Protein Domains for IGHV1OR15-1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGHV1OR15-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGHV1OR15-1 Gene

Function for IGHV1OR15-1 Gene

Gene Ontology (GO) - Molecular Function for IGHV1OR15-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003823 antigen binding NAS 2841108
GO:0004252 serine-type endopeptidase activity TAS --
GO:0034987 immunoglobulin receptor binding IBA --
genes like me logo Genes that share ontologies with IGHV1OR15-1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV1OR15-1 Gene

Localization for IGHV1OR15-1 Gene

Gene Ontology (GO) - Cellular Components for IGHV1OR15-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005886 plasma membrane TAS --
GO:0009897 external side of plasma membrane IBA --
GO:0042571 immunoglobulin complex, circulating IBA --
GO:0072562 blood microparticle IBA --
genes like me logo Genes that share ontologies with IGHV1OR15-1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for IGHV1OR15-1 Gene

Pathways & Interactions for IGHV1OR15-1 Gene

SuperPathways for IGHV1OR15-1 Gene

No Data Available

Interacting Proteins for IGHV1OR15-1 Gene

Gene Ontology (GO) - Biological Process for IGHV1OR15-1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
GO:0006898 receptor-mediated endocytosis TAS --
GO:0006910 phagocytosis, recognition IBA --
GO:0006911 phagocytosis, engulfment IBA --
GO:0006955 immune response NAS 2841108
genes like me logo Genes that share ontologies with IGHV1OR15-1: view

No data available for Pathways by source and SIGNOR curated interactions for IGHV1OR15-1 Gene

Drugs & Compounds for IGHV1OR15-1 Gene

No Compound Related Data Available

Transcripts for IGHV1OR15-1 Gene

mRNA/cDNA for IGHV1OR15-1 Gene

(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV1OR15-1 Gene

No ASD Table

Relevant External Links for IGHV1OR15-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for IGHV1OR15-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGHV1OR15-1 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV1OR15-1 Gene

This gene is overexpressed in Spleen (x9.1) and Small Intestine - Terminal Ileum (x4.6).
genes like me logo Genes that share expression patterns with IGHV1OR15-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV1OR15-1 Gene

Orthologs for IGHV1OR15-1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IGHV1OR15-1 Gene

Organism Taxonomy Gene Similarity Type Details
(Monodelphis domestica)
Mammalia -- 34
  • 35 (a)
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 28 (a)
(Gallus gallus)
Aves -- 34
  • 31 (a)
(Anolis carolinensis)
Reptilia -- 34
  • 52 (a)
(Danio rerio)
Actinopterygii ighv9-2 34
  • 35 (a)
Species where no ortholog for IGHV1OR15-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IGHV1OR15-1 Gene

Gene Tree for IGHV1OR15-1 (if available)
Gene Tree for IGHV1OR15-1 (if available)

Paralogs for IGHV1OR15-1 Gene

Variants for IGHV1OR15-1 Gene

Sequence variations from dbSNP and Humsavar for IGHV1OR15-1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000002633 -- 22,161,376(+) TAAAT(A/G)TGATT upstream-variant-2KB
rs1000118358 -- 22,162,884(+) TATGG(C/T)TTGGA intron-variant, upstream-variant-2KB
rs1000266762 -- 22,160,251(+) AAAAC(C/T)GAAAA downstream-variant-500B, upstream-variant-2KB
rs1012830676 -- 22,161,063(+) TTATG(A/G)GCCAT upstream-variant-2KB
rs1012841777 -- 22,159,990(+) AGATC(A/T)CCTGA downstream-variant-500B

Relevant External Links for IGHV1OR15-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV1OR15-1 Gene

Disorders for IGHV1OR15-1 Gene

Relevant External Links for IGHV1OR15-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for IGHV1OR15-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV1OR15-1 Gene

Publications for IGHV1OR15-1 Gene

  1. Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. (PMID: 7951227) Tomlinson IM … Winter G (Human molecular genetics 1994) 3 60
  2. Nucleotidic sequence analysis of the variable domains of four human monoclonal IgM with an antibody activity to myelin-associated glycoprotein. (PMID: 7681398) Mariette X … Brouet JC (European journal of immunology 1993) 3 60
  3. Dispersed localization of D segments in the human immunoglobulin heavy-chain locus. (PMID: 2841108) Matsuda F … Honjo T (The EMBO journal 1988) 3 60
  4. Cloning and sequence determination of the gene for the human immunoglobulin epsilon chain expressed in a myeloma cell line. (PMID: 6815656) Kenten JH … Gould HJ (Proceedings of the National Academy of Sciences of the United States of America 1982) 3 60

Products for IGHV1OR15-1 Gene

Sources for IGHV1OR15-1 Gene

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