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Aliases for IGHV1-69 Gene

Aliases for IGHV1-69 Gene

  • Immunoglobulin Heavy Variable 1-69 2 3 5
  • Ig Heavy Chain V-I Region EU 3 4
  • Immunoglobulin Heavy Variable 1-E 3
  • Ig Heavy Chain V-I Region SIE 4
  • Ig Heavy Chain V-I Region WOL 4
  • IGHV169 3
  • IGHV1-E 3
  • IGHV1E 3

External Ids for IGHV1-69 Gene

Previous HGNC Symbols for IGHV1-69 Gene

  • IGHV1-E

Previous GeneCards Identifiers for IGHV1-69 Gene

  • GC14U990216
  • GC14M105141
  • GC14M106240
  • GC14M107169
  • GC14M087323
  • GC14M107001
  • GC14M107743
  • GC14M107836
  • GC14M107890

Summaries for IGHV1-69 Gene

GeneCards Summary for IGHV1-69 Gene

IGHV1-69 (Immunoglobulin Heavy Variable 1-69) is a Protein Coding gene. An important paralog of this gene is IGHV1-69-2.

UniProtKB/Swiss-Prot for IGHV1-69 Gene

  • V region of the variable domain of immunoglobulin heavy chains that participates in the antigen recognition. Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes. In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells. Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:22158414, PubMed:20176268). The antigen binding site is formed by the variable domain of one heavy chain, together with that of its associated light chain. Thus, each immunoglobulin has two antigen binding sites with remarkable affinity for a particular antigen. The variable domains are assembled by a process called V-(D)-J rearrangement and can then be subjected to somatic hypermutations which, after exposure to antigen and selection, allow affinity maturation for a particular antigen (PubMed:20176268, PubMed:17576170).

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGHV1-69 Gene

Genomics for IGHV1-69 Gene

Regulatory Elements for IGHV1-69 Gene

Enhancers for IGHV1-69 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F106674 0.5 Ensembl 39.3 +40.1 40081 0.6 CTCF ZNF143 RAD21 IGHV1-69 IGHV3-66 ENSG00000211974 IGHV4-39 ENSG00000283501
GH14F106714 0.9 Ensembl ENCODE 38 +0.1 133 1.7 ASH2L EBF1 TBX21 IGHV1-69 IGHV3-66 ENSG00000211974 IGHV7-81 ENSG00000282359
GH14F106707 0.2 ENCODE 36.8 +7.0 7019 0.8 IGHV1-69 IGHV3-66 IGHV3-72 ENSG00000282359
GH14F106694 1 Ensembl ENCODE 36 +20.2 20211 1.2 CTCF MAZ RFX1 HLF MAX ZIC2 RAD21 GLIS2 POLR2A SCRT2 IGHV1-69 ENSG00000211974 IGHV3-66 IGHVIII-67-3 IGHVIII-67-4
GH14F106697 0.8 Ensembl ENCODE 35.7 +16.2 16241 2.3 POLR2A IKZF1 EED ZNF652 MYC SPI1 IGHV1-69 ENSG00000211974 IGHV3-66 IGHV3-72 GC14M108050 IGHVIII-67-4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IGHV1-69 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGHV1-69 Gene

Chromosome:
14
Start:
106,714,682 bp from pter
End:
106,715,181 bp from pter
Size:
500 bases
Orientation:
Minus strand

Genomic View for IGHV1-69 Gene

Genes around IGHV1-69 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV1-69 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV1-69 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV1-69 Gene

Proteins for IGHV1-69 Gene

  • Protein details for IGHV1-69 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P01742-HV169_HUMAN
    Recommended name:
    Immunoglobulin heavy variable 1-69
    Protein Accession:
    P01742
    Secondary Accessions:
    • A0A0B4J1V5
    • P01760
    • P01761

    Protein attributes for IGHV1-69 Gene

    Size:
    117 amino acids
    Molecular mass:
    12659 Da
    Quaternary structure:
    • Immunoglobulins are composed of two identical heavy chains and two identical light chains, linked by disulfide bonds.

neXtProt entry for IGHV1-69 Gene

Post-translational modifications for IGHV1-69 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IGHV1-69 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV1-69 Gene

Domains & Families for IGHV1-69 Gene

Gene Families for IGHV1-69 Gene

Protein Domains for IGHV1-69 Gene

Graphical View of Domain Structure for InterPro Entry

P01742

UniProtKB/Swiss-Prot:

HV169_HUMAN :
  • Contains 1 Ig-like (immunoglobulin-like) domain.
Domain:
  • Contains 1 Ig-like (immunoglobulin-like) domain.
genes like me logo Genes that share domains with IGHV1-69: view

No data available for Suggested Antigen Peptide Sequences for IGHV1-69 Gene

Function for IGHV1-69 Gene

Molecular function for IGHV1-69 Gene

UniProtKB/Swiss-Prot Function:
V region of the variable domain of immunoglobulin heavy chains that participates in the antigen recognition. Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes. In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells. Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:22158414, PubMed:20176268). The antigen binding site is formed by the variable domain of one heavy chain, together with that of its associated light chain. Thus, each immunoglobulin has two antigen binding sites with remarkable affinity for a particular antigen. The variable domains are assembled by a process called V-(D)-J rearrangement and can then be subjected to somatic hypermutations which, after exposure to antigen and selection, allow affinity maturation for a particular antigen (PubMed:20176268, PubMed:17576170).

Gene Ontology (GO) - Molecular Function for IGHV1-69 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003823 antigen binding NAS 5489771
GO:0004252 serine-type endopeptidase activity TAS --
genes like me logo Genes that share ontologies with IGHV1-69: view

Animal Model Products

miRNA for IGHV1-69 Gene

miRTarBase miRNAs that target IGHV1-69

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for IGHV1-69 Gene

Localization for IGHV1-69 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IGHV1-69 Gene

Secreted. Cell membrane.

Gene Ontology (GO) - Cellular Components for IGHV1-69 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region NAS,TAS --
GO:0005886 plasma membrane IEA,TAS --
GO:0016020 membrane IEA --
genes like me logo Genes that share ontologies with IGHV1-69: view

No data available for Subcellular locations from COMPARTMENTS for IGHV1-69 Gene

Pathways & Interactions for IGHV1-69 Gene

SuperPathways for IGHV1-69 Gene

No Data Available

Interacting Proteins for IGHV1-69 Gene

Gene Ontology (GO) - Biological Process for IGHV1-69 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002376 immune system process IEA --
GO:0006508 proteolysis IEA --
GO:0006898 receptor-mediated endocytosis TAS --
GO:0006955 immune response NAS 5489771
GO:0006956 complement activation TAS --
genes like me logo Genes that share ontologies with IGHV1-69: view

No data available for Pathways by source and SIGNOR curated interactions for IGHV1-69 Gene

Transcripts for IGHV1-69 Gene

mRNA/cDNA for IGHV1-69 Gene

(673) Additional mRNA sequences :
(162) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IGHV1-69 Gene

Immunoglobulin heavy variable 1-69:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV1-69 Gene

No ASD Table

Relevant External Links for IGHV1-69 Gene

GeneLoc Exon Structure for
IGHV1-69
ECgene alternative splicing isoforms for
IGHV1-69

Expression for IGHV1-69 Gene

mRNA expression in normal human tissues for IGHV1-69 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV1-69 Gene

This gene is overexpressed in Spleen (x8.6) and Colon - Transverse (x4.1).

Protein differential expression in normal tissues from HIPED for IGHV1-69 Gene

This gene is overexpressed in Urine (60.4) and Serum (8.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for IGHV1-69 Gene



Protein tissue co-expression partners for IGHV1-69 Gene

- Elite partner

SOURCE GeneReport for Unigene cluster for IGHV1-69 Gene:

Hs.704366
genes like me logo Genes that share expression patterns with IGHV1-69: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for IGHV1-69 Gene

Orthologs for IGHV1-69 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IGHV1-69 Gene

Organism Taxonomy Gene Similarity Type Details
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 38 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 34 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 35
  • 34 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 52 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii ighv9-1 35
  • 43 (a)
ManyToMany
Species where no ortholog for IGHV1-69 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IGHV1-69 Gene

ENSEMBL:
Gene Tree for IGHV1-69 (if available)
TreeFam:
Gene Tree for IGHV1-69 (if available)

Paralogs for IGHV1-69 Gene

Variants for IGHV1-69 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for IGHV1-69 Gene

HV169_HUMAN-P01742
There are several alleles. The sequence shown is that of IMGT allele IGHV1-69*06.

Relevant External Links for IGHV1-69 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV1-69

No data available for Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV1-69 Gene

Disorders for IGHV1-69 Gene

Relevant External Links for IGHV1-69

Genetic Association Database (GAD)
IGHV1-69
Human Genome Epidemiology (HuGE) Navigator
IGHV1-69
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IGHV1-69

No disorders were found for IGHV1-69 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV1-69 Gene

Publications for IGHV1-69 Gene

  1. Characterization of immunoglobulin heavy and light chain gene expression in chronic lymphocytic leukemia and related disorders. (PMID: 19220298) Nakahashi H. … Karasawa M. (Cancer Sci. 2009) 3 46 64
  2. Characterization of two highly homologous autoantibody-related VH1 genes in humans. (PMID: 8469934) Yang P.M. … Chen P.P. (Scand. J. Immunol. 1993) 2 3 64
  3. Amino acid sequence of the variable regions of heavy chains from two idiotypically cross-reactive human IgM anti-gamma-globulins of the Wa group. (PMID: 7028111) Andrews D.W. … Capra J.D. (Biochemistry 1981) 3 4 64
  4. The covalent structure of a human gamma G-immunoglobulin. VII. Amino acid sequence of heavy-chain cyanogen bromide fragments H1-H4. (PMID: 5489771) Cunningham B.A. … Edelman G.M. (Biochemistry 1970) 3 4 64
  5. IGHV1-69-encoded antibodies expressed in chronic lymphocytic leukemia react with malondialdehyde-acetaldehyde adduct, an immunodominant oxidation-specific epitope. (PMID: 23840319) Que X. … Witztum J.L. (PLoS ONE 2013) 3 64

Products for IGHV1-69 Gene

Sources for IGHV1-69 Gene

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