IGHE Gene
protein-coding GIFtS : 41
GCID: GC14 M106066
immunoglobulin heavy constant epsilon
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Aliasesfor IGHE gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Immunoglobulin Heavy Constant Epsilon 1 2 IgE2
Export aliases for IGHE gene to outside databases Previous GC identifers: GC14U990033 GC14M100057 GC14M104038 GC14M105137 GC14M086257
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Summariesfor IGHE gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Gene Wiki entry for IGHE
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Genomic Viewsfor IGHE gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for IGHE Other transcription factors Search SABiosciences Chromatin IP Primers for IGHE Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat IGHE
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 14q32.33 Ensembl cytogenetic band: 14q32.33 HGNC cytogenetic band: 14q32.33 IGHE Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 14 GeneLoc Exon Structure
GeneLoc location for GC14M106066: view genomic region
(about GC identifiers )
Start:
106,064,224 bp from pter
End:
106,068,065 bp from pter
Size:
3,842 bases
Orientation:
minus strand
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Proteinsfor IGHE gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: IGHE_HUMAN, P01854 (See
protein sequence )Recommended Name: Ig epsilon chain C region Size : 428 amino acids; 47019 Da
Sequence caution : Sequence=AAB59424.1; Type=Erroneous initiation;
6/13 PDB 3D structures from and Proteopedia for IGHE (see all 13 ):1F6A (3D)
  1FP5 (3D)
  1G84 (3D)
  1IGE (3D)
  1O0V (3D)
  2WQR (3D)
 Explore the universe of human proteins at neXtProt for IGHE: NX_P01854 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P01854 IGHE Protein expression data from MOPED and PaxDb : About this image
ENSEMBL proteins: ENSP00000374983 ENSP00000458614 ENSP00000458531 Human Recombinant Protein Products: IGHE Antibody Products: Assay Products for IGHE:
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Protein
Domains / Familiesfor IGHE gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
IGHE for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P01854 ProtoNet protein and cluster: P01854
1 Blocks protein family : IPB003597 Immunoglobulin C-type UniProtKB/Swiss-Prot: IGHE_HUMAN, P01854 Similarity : Contains 4 Ig-like (immunoglobulin-like) domains
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Functionfor IGHE gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: Genatlas biochemistry entry for IGHE : immunoglobulin,epsilon Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
IGHE for ontologies About GeneDecksing Animal Models: Mouse knock-outs for IGHE: Igh-7 Igh-tm1.1Lam Igh-7 Igh-tm1Led 4 MGI mutant phenotypes (inferred from 6 alleles ) (MGI details for Igh-7) :
IGHE for phenotypes About GeneDecksing
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Pathways & Interactionsfor IGHE gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Immune response Fc epsilon RI pathway 2 Immune response_NFAT in immune response 3 Immune response_IL-4 signaling pathway 4 IL4-mediated signaling events
Pathway sources See GeneCards unified pathways Show all pathways 3 EMD Millipore Pathways for IGHE 3 GeneGo (Thomson Reuters) Pathways for IGHE 2 BioSystems Pathways for IGHE
IGHE for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for IGHE STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/40 Interacting proteins for IGHE (ENSP00000374983 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 40 )About this table Gene Ontology (GO): 1 biological process term (GO ID links to tree view) : About this table
IGHE for ontologies About GeneDecksing
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Drugs & Compoundsfor IGHE gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
IGHE for compounds About GeneDecksing Browse Tocris compounds for IGHE 1 DrugBank Compound for IGHE About this table Compound Synonyms
CAS
# Type Actions PubMed Ids Alpha-D-Mannose -- 3458-28-4 target -- --
10/119 Novoseek chemical compound relationships for IGHE gene (see all 119 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
allergens
95.8
1757
9003217 (8), 9117883 (7), 15867862 (7), 17507082 (7) (see all 99 )
omalizumab
90.5
346
15478383 (7), 19130931 (7), 20139035 (6), 18269927 (6) (see all 99 )
histamine
83.1
523
8760789 (6), 1700888 (5), 10380774 (5), 7690780 (4) (see all 99 )
unicap
81.7
34
11258690 (3), 10432371 (1), 15934281 (1), 16124647 (1) (see all 28 )
methacholine
75.1
132
7613551 (3), 8959356 (3), 9487341 (3), 11476459 (3) (see all 89 )
hevein
66.2
39
9847442 (6), 9768591 (5), 9097919 (4), 11940078 (3) (see all 11 )
latex
65.6
491
11152171 (9), 10565556 (9), 7697481 (7), 18939728 (6) (see all 99 )
ovomucoid
64
90
9275136 (5), 17573723 (5), 11422162 (4), 1720303 (4) (see all 21 )
tarc
63.9
29
15813816 (5), 15864020 (4), 16543550 (3), 18173519 (2) (see all 16 )
actinidin
63.8
14
17845415 (4), 15536427 (2), 18727477 (1)
Search CenterWatch for drugs/clinical trials and news about IGHE
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Transcriptsfor IGHE gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000390541 (uc001yrw.1 uc001yrx.2 ) ENST00000577108 (uc001yru.2 )ENST00000576077 5 AceView cDNA sequences :
S71439 S55276 S55277 S55271 AK130825 GeneLoc Exon Structure
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Expression for IGHE gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section IGHE expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image IGHE expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Ovary Antral Follicle Secondary Oocyte Female Gametocytes, Germ Cells Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See IGHE Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for IGHE SABiosciences Custom PCR Arrays for IGHE Primer Products: Browse OriGene genome-wide validated SYBR primer pairs Browse OriGene validated miRNA SYBR primer pairs Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat IGHE Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat IGHE Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat IGHE
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Orthologsfor IGHE gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for IGHE gene from 2/5 species (see all 5 ) About this table
ENSEMBL Gene Tree for IGHE (if available)TreeFam Gene Tree for IGHE (if available)
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Paralogsfor IGHE gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for IGHE gene IGHG2 2 IGHG3 2 IGHM 2 IGHA1 2 IGHG4 2 IGHG1 2 IGHA2 2 2 SIMAP similar genes for IGHE using alignment to 1 protein entry: IGHE_HUMAN :IGKC IGHM
IGHE for paralogs About GeneDecksing 3 Pseudogenes.org Pseudogenes for IGHE PGOHUM00000262208 PGOHUM00000247910 PGOHUM00000236371
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Genomic Variantsfor IGHE gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: IGHE_HUMAN, P01854 Polymorphism : The following alleles of IGHE are known: IGHE*01 and IGHE*02. The sequence shown is that of allele 02
SABiosciences Cancer Mutation PCR Assays
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Disorders
/ Diseasesfor IGHE gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
IGHE for disorders About GeneDecksing
OMIM gene information: 147180
OMIM disorders : --20/227 diseases for IGHE (see all 227 ): About MalaCards zap-70 deficiency hyper-ige syndrome alpha 1-antitrypsin deficiency exercise induced anaphylaxis otitis media brachial plexus lesion eczema herpeticum churg-strauss syndrome cough variant asthma extrinsic allergic alveolitis norwegian scabies fournier gangrene staphylococcal toxic shock syndrome pityriasis versicolor eosinophilic gastroenteritis constrictive pericarditis allergic bronchopulmonary aspergillosis intrinsic asthma sick building syndrome spina bifida 2 diseases from the University of Copenhagen DISEASES database for IGHE :Hypersensitivity reaction type I disease Anisakiasis 10/97 Novoseek disease relationships for IGHE gene (see all 97 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
allergy
94.2
1000
19813686 (6), 9842212 (5), 7499673 (5), 16444083 (5) (see all 99 )
atopy
93.3
653
10457106 (5), 17355242 (5), 15737301 (5), 18221478 (5) (see all 99 )
dermatitis atopic
92.3
610
8615051 (6), 12368565 (5), 11678851 (5), 11035824 (5) (see all 99 )
asthma
91.1
1695
19647861 (9), 17498790 (9), 19913396 (7), 18951256 (7) (see all 99 )
asthma allergic
90
225
18602573 (5), 11544457 (4), 15182647 (4), 14687477 (3) (see all 99 )
allergic reaction
88.7
266
2314401 (4), 19178404 (3), 2040810 (3), 10224469 (2) (see all 99 )
allergy food
87.6
157
19568005 (3), 15969684 (3), 16285230 (3), 11467993 (3) (see all 99 )
hyper-ige syndrome
87.1
99
2116376 (4), 10485303 (4), 1720150 (4), 18380833 (3) (see all 52 )
hypersensitivity immediate
86.8
98
10795645 (2), 9561922 (2), 11716123 (2), 8517144 (2) (see all 81 )
allergic rhinitis
86.6
236
19159574 (5), 17225520 (5), 16340277 (3), 8343243 (3) (see all 99 )
Export disorders for IGHE gene to outside databases
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Publicationsfor IGHE gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for IGHE gene, integrated from 9 sources (see all 3188 ): (articles sorted by number of sources associating them with IGHE) Utopia : connect your pdf to the dynamic world of online information
A model of the Fc of immunoglobulin E. (PubMed id 3796618) 1 , 2 Padlan E.A. and Davies D.R. (1986) Molecular cloning and nucleotide sequencing of human immunoglobulin epsilon chain cDNA. (PubMed id 6300763) 1 , 2 Seno M.... Honjo T. (1983) Long terminal repeat-like elements flank a human immunoglobulin epsilon pseudogene that lacks introns. (PubMed id 6234164) 1 , 2 Flanagan J.G. and Rabbitts T.H. (1982) The sequence of a human immunoglobulin epsilon heavy chain constant region gene, and evidence for three non-allelic genes. (PubMed id 6327276) 1 , 2 Ueda S.... Honjo T. (1982) Duplication and deletion in the human immunoglobulin epsilon genes. (PubMed id 6288268) 1 , 2 Max E.E.... Leder P. (1982) Cloning and sequence determination of the gene for the human immunoglobulin epsilon chain expressed in a myeloma cell line. (PubMed id 6815656) 1 , 2 Kenten J.H.... Gould H.J. (1982) [Study on the correlation of IgE and GM-CSF contents with eosinophil accumulation in nasal polyp] (PubMed id 18254319) 1 , 9 Tian C....Du J. (2007) Synthesis of IL-13 by human B lymphocytes: regulation and role in IgE production. (PubMed id 15356573) 1 , 9 Hajoui O....Mazer B.D. (2004) IFN-gamma, IL-5, IL-6 and IgE in patients infected with Giardia intestinalis. (PubMed id 19419945) 1 , 9 Matowicka-Karna J....Kemona H. (2009) Elevated serum immunoglobulin E (IgE): when to suspect hyper-IgE syndrome-A 10-year pediatric tertiary care center experience. (PubMed id 19331717) 1 , 9 Joshi A.Y....Abraham R.S. (2009)
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External Searches for IGHE gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing IGHE gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing IGHE gene
(According to HUGE )
About This Section --
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Specialized Databases showing IGHE gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for IGHE Pharmacogenomics, SNPs, Pathways IMGT entry for IGHE The international I mM unoG eneT ics information system® specializing in Immunoglobulins (IG), T cell receptors (TR), Major Histocompatibility Complex (MHC) and related proteins of the immune system (RPI) of human and other vertebrate species. IMGT/GENE-DB http://www.imgt.org/IMGT_GENE-DB/GENElect?query=2+IGHE&species=Homo+sapiens
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About This Section Patent Information for IGHE gene: Search GeneIP for patents involving IGHE GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor IGHE gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat IGHE Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing IGHE QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat IGHE Search QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat IGHE Search QIAGEN QuantiFast Probe-based Assays in human, mouse, rat IGHE Search QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat IGHE
Search Tocris compounds for IGHE
IGHE Proteins, Antibodies, CLIAs, and ELISAs
Search ThermoFisher Antibodies for IGHE
Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat IGHE
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Aliases for IGHE
Databases for IGHE
Disorders / Diseases for IGHE
Domains / Families for IGHE
Drugs / Compounds for IGHE
Expression for IGHE
Function for IGHE
Genomic Views for IGHE
Intellectual Property for IGHE
Orthologs for IGHE
Paralogs for IGHE
Pathways / Interactions for IGHE
Products for IGHE
Proteins for IGHE
Publications for IGHE
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Summaries for IGHE
Transcripts for IGHE
Variants for IGHE
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