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Aliases for IGFL4 Gene

Aliases for IGFL4 Gene

  • IGF Like Family Member 4 2 3 5

External Ids for IGFL4 Gene

Previous GeneCards Identifiers for IGFL4 Gene

  • GC19M051317
  • GC00U921541
  • GC19M051234
  • GC19M046543
  • GC19M042971

Summaries for IGFL4 Gene

Entrez Gene Summary for IGFL4 Gene

  • IGFL4 belongs to the insulin-like growth factor (IGF; see MIM 147440) family of signaling molecules that play critical roles in cellular energy metabolism and in growth and development, especially prenatal growth (Emtage et al., 2006 [PubMed 16890402]).[supplied by OMIM, Mar 2008]

GeneCards Summary for IGFL4 Gene

IGFL4 (IGF Like Family Member 4) is a Protein Coding gene. An important paralog of this gene is IGFL2.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGFL4 Gene

Genomics for IGFL4 Gene

Regulatory Elements for IGFL4 Gene

Enhancers for IGFL4 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around IGFL4 on UCSC Golden Path with GeneCards custom track

Promoters for IGFL4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around IGFL4 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGFL4 Gene

Chromosome:
19
Start:
46,039,748 bp from pter
End:
46,077,118 bp from pter
Size:
37,371 bases
Orientation:
Minus strand

Genomic View for IGFL4 Gene

Genes around IGFL4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGFL4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGFL4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGFL4 Gene

Proteins for IGFL4 Gene

  • Protein details for IGFL4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6B9Z1-IGFL4_HUMAN
    Recommended name:
    Insulin growth factor-like family member 4
    Protein Accession:
    Q6B9Z1

    Protein attributes for IGFL4 Gene

    Size:
    124 amino acids
    Molecular mass:
    13885 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGFL4 Gene

Proteomics data for IGFL4 Gene at MOPED

Post-translational modifications for IGFL4 Gene

  • Glycosylation at Asn 57 and Asn 84

Other Protein References for IGFL4 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for IGFL4 Gene

Domains & Families for IGFL4 Gene

Protein Domains for IGFL4 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IGFL4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6B9Z1

UniProtKB/Swiss-Prot:

IGFL4_HUMAN :
  • Belongs to the IGFL family.
Family:
  • Belongs to the IGFL family.
genes like me logo Genes that share domains with IGFL4: view

No data available for Gene Families for IGFL4 Gene

Function for IGFL4 Gene

Phenotypes for IGFL4 Gene

GenomeRNAi human phenotypes for IGFL4:
genes like me logo Genes that share phenotypes with IGFL4: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGFL4 Gene

Localization for IGFL4 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IGFL4 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IGFL4 Gene COMPARTMENTS Subcellular localization image for IGFL4 gene
Compartment Confidence
extracellular 4
cytosol 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for IGFL4 Gene

Pathways & Interactions for IGFL4 Gene

SuperPathways for IGFL4 Gene

No Data Available

Interacting Proteins for IGFL4 Gene

Gene Ontology (GO) - Biological Process for IGFL4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGFL4 Gene

Drugs & Compounds for IGFL4 Gene

No Compound Related Data Available

Transcripts for IGFL4 Gene

mRNA/cDNA for IGFL4 Gene

(2) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IGFL4 Gene

IGF-like family member 4:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IGFL4 Gene

No ASD Table

Relevant External Links for IGFL4 Gene

GeneLoc Exon Structure for
IGFL4
ECgene alternative splicing isoforms for
IGFL4

Expression for IGFL4 Gene

mRNA expression in normal human tissues for IGFL4 Gene

mRNA differential expression in normal tissues according to GTEx for IGFL4 Gene

This gene is overexpressed in Brain - Cortex (x5.1) and Brain - Frontal Cortex (BA9) (x4.5).

Protein differential expression in normal tissues from HIPED for IGFL4 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for IGFL4 Gene



SOURCE GeneReport for Unigene cluster for IGFL4 Gene Hs.531310

mRNA Expression by UniProt/SwissProt for IGFL4 Gene

Q6B9Z1-IGFL4_HUMAN
Tissue specificity: Detected in the cerebellum.
genes like me logo Genes that share expression patterns with IGFL4: view

Protein tissue co-expression partners for IGFL4 Gene

- Elite partner

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for IGFL4 Gene

Orthologs for IGFL4 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for IGFL4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IGFL4 36
  • 64 (a)
OneToOne
Species with no ortholog for IGFL4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGFL4 Gene

ENSEMBL:
Gene Tree for IGFL4 (if available)
TreeFam:
Gene Tree for IGFL4 (if available)

Paralogs for IGFL4 Gene

Paralogs for IGFL4 Gene

(3) SIMAP similar genes for IGFL4 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for IGFL4 Gene

genes like me logo Genes that share paralogs with IGFL4: view

Variants for IGFL4 Gene

Sequence variations from dbSNP and Humsavar for IGFL4 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10412490 - 46,040,413(+) GTCTA(A/C/G)GATCT reference, missense
rs17271272 - 46,040,308(+) AGAGC(C/T)GGGTC reference, missense
rs7257654 -- 46,044,821(+) AGGTA(C/T)GGGAA intron-variant
rs71175253 -- 46,047,434(+) AACTG(-/AAG)GAGAT intron-variant
rs71175255 -- 46,052,983(+) AAAAA(-/A)GCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IGFL4 Gene

Variant ID Type Subtype PubMed ID
nsv912175 CNV Loss 21882294
nsv912176 CNV Gain 21882294

Variation tolerance for IGFL4 Gene

Residual Variation Intolerance Score: 76.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.24; 52.55% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IGFL4 Gene

HapMap Linkage Disequilibrium report
IGFL4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IGFL4 Gene

Disorders for IGFL4 Gene

Relevant External Links for IGFL4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IGFL4

No disorders were found for IGFL4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGFL4 Gene

Publications for IGFL4 Gene

  1. IGFL: a secreted family with conserved cysteine residues and similarities to the IGF superfamily. (PMID: 16890402) Emtage P. … Tang Y.T. (Genomics 2006) 3 4 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3
  3. Chemical synthesis of a Zwitterhormon, insulaxin, and of a relaxin-like bombyxin derivative. (PMID: 8703947) BA1llesbach E.E. … Schwabe C. (Biochemistry 1996) 23
  4. Role of mercury (Hg) in resistant infections & effective treatment of Chlamydia trachomatis and Herpes family viral infections (and potential treatment for cancer) by removing localized Hg deposits with Chinese parsley and delivering effective antibiotics using various drug uptake enhancement methods. (PMID: 8686573) Omura Y. … Beckman S.L. (Acupunct Electrother Res 1995) 23

Products for IGFL4 Gene

Sources for IGFL4 Gene

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