Free for academic non-profit institutions. Other users need a Commercial license

Aliases for IGFL2 Gene

Aliases for IGFL2 Gene

  • IGF Like Family Member 2 2 3 5
  • IGF-Like Family Member 2 3
  • VPRI645 3
  • UNQ645 3

External Ids for IGFL2 Gene

Previous GeneCards Identifiers for IGFL2 Gene

  • GC19P051344
  • GC19P046651
  • GC19P043078
  • GC19P046143

Summaries for IGFL2 Gene

Entrez Gene Summary for IGFL2 Gene

  • IGFL2 belongs to the insulin-like growth factor (IGF; see MIM 147440) family of signaling molecules that play critical roles in cellular energy metabolism and in growth and development, especially prenatal growth (Emtage et al., 2006 [PubMed 16890402]).[supplied by OMIM, Mar 2008]

GeneCards Summary for IGFL2 Gene

IGFL2 (IGF Like Family Member 2) is a Protein Coding gene. Diseases associated with IGFL2 include sezary's disease. An important paralog of this gene is IGFL4.

UniProtKB/Swiss-Prot for IGFL2 Gene

  • Potential ligand of the IGFLR1 cell membrane receptor.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGFL2 Gene

Genomics for IGFL2 Gene

Regulatory Elements for IGFL2 Gene

Promoters for IGFL2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around IGFL2 on UCSC Golden Path with GeneCards custom track

Genomic Location for IGFL2 Gene

Chromosome:
19
Start:
46,078,528 bp from pter
End:
46,195,097 bp from pter
Size:
116,570 bases
Orientation:
Plus strand

Genomic View for IGFL2 Gene

Genes around IGFL2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGFL2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGFL2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGFL2 Gene

Proteins for IGFL2 Gene

  • Protein details for IGFL2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UWQ7-IGFL2_HUMAN
    Recommended name:
    Insulin growth factor-like family member 2
    Protein Accession:
    Q6UWQ7
    Secondary Accessions:
    • E9PAV1
    • Q6B9Z3

    Protein attributes for IGFL2 Gene

    Size:
    119 amino acids
    Molecular mass:
    13248 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAT77786.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for IGFL2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IGFL2 Gene

Proteomics data for IGFL2 Gene at MOPED

Post-translational modifications for IGFL2 Gene

No Post-translational modifications

Other Protein References for IGFL2 Gene

No data available for DME Specific Peptides for IGFL2 Gene

Domains & Families for IGFL2 Gene

Protein Domains for IGFL2 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IGFL2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6UWQ7

UniProtKB/Swiss-Prot:

IGFL2_HUMAN :
  • Belongs to the IGFL family.
Family:
  • Belongs to the IGFL family.
genes like me logo Genes that share domains with IGFL2: view

No data available for Gene Families for IGFL2 Gene

Function for IGFL2 Gene

Molecular function for IGFL2 Gene

UniProtKB/Swiss-Prot Function:
Potential ligand of the IGFLR1 cell membrane receptor.

Phenotypes for IGFL2 Gene

GenomeRNAi human phenotypes for IGFL2:
genes like me logo Genes that share phenotypes with IGFL2: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGFL2 Gene

Localization for IGFL2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IGFL2 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IGFL2 Gene COMPARTMENTS Subcellular localization image for IGFL2 gene
Compartment Confidence
extracellular 5

No data available for Gene Ontology (GO) - Cellular Components for IGFL2 Gene

Pathways & Interactions for IGFL2 Gene

SuperPathways for IGFL2 Gene

No Data Available

Interacting Proteins for IGFL2 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000395219%0d%0a9606.ENSP00000246532%0d%0a
Selected Interacting proteins: ENSP00000395219 for IGFL2 Gene via STRING

Symbol External ID(s) Details
IGFLR1

Gene Ontology (GO) - Biological Process for IGFL2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGFL2 Gene

Drugs & Compounds for IGFL2 Gene

No Compound Related Data Available

Transcripts for IGFL2 Gene

Unigene Clusters for IGFL2 Gene

IGF-like family member 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IGFL2 Gene

No ASD Table

Relevant External Links for IGFL2 Gene

GeneLoc Exon Structure for
IGFL2
ECgene alternative splicing isoforms for
IGFL2

Expression for IGFL2 Gene

mRNA expression in normal human tissues for IGFL2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for IGFL2 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x21.9) and Skin - Not Sun Exposed (Suprapubic) (x21.5).

SOURCE GeneReport for Unigene cluster for IGFL2 Gene Hs.99376

mRNA Expression by UniProt/SwissProt for IGFL2 Gene

Q6UWQ7-IGFL2_HUMAN
Tissue specificity: Detected in cerebellum, heart, placenta, spleen, stomach, testis and thymus.
genes like me logo Genes that share expression patterns with IGFL2: view

Primer Products

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for IGFL2 Gene

Orthologs for IGFL2 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for IGFL2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IGFL2 35
  • 97.39 (n)
  • 94.78 (a)
IGFL2 36
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Igfl3 36
  • 34 (a)
OneToMany
Species with no ortholog for IGFL2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IGFL2 Gene

ENSEMBL:
Gene Tree for IGFL2 (if available)
TreeFam:
Gene Tree for IGFL2 (if available)

Paralogs for IGFL2 Gene

Paralogs for IGFL2 Gene

(3) SIMAP similar genes for IGFL2 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with IGFL2: view

Variants for IGFL2 Gene

Sequence variations from dbSNP and Humsavar for IGFL2 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs401266 -- 46,140,856(+) ctgca(C/T)ttttc intron-variant
rs401311 -- 46,140,653(+) caaac(C/T)actac intron-variant
rs401891 -- 46,140,799(+) caggg(C/T)ggagc intron-variant
rs759627 -- 46,083,797(+) TTTGC(A/G)CATTG intron-variant
rs1861789 -- 46,134,925(+) TAGGT(A/G)CATAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IGFL2 Gene

Variant ID Type Subtype PubMed ID
nsv2511 CNV Insertion 18451855
dgv3959n71 CNV Gain 21882294
nsv912179 CNV Gain 21882294
nsv470147 CNV Gain 18288195
nsv458713 CNV Gain 19166990

Variation tolerance for IGFL2 Gene

Residual Variation Intolerance Score: 60.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.20; 4.60% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IGFL2 Gene

HapMap Linkage Disequilibrium report
IGFL2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IGFL2 Gene

Disorders for IGFL2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for IGFL2 Gene - From: DISEASES

Disorder Aliases PubMed IDs
sezary's disease
  • sezary disease
- elite association - COSMIC cancer census association via MalaCards
Search IGFL2 in MalaCards View complete list of genes associated with diseases

Relevant External Links for IGFL2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IGFL2
genes like me logo Genes that share disorders with IGFL2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IGFL2 Gene

Publications for IGFL2 Gene

  1. IGFL: a secreted family with conserved cysteine residues and similarities to the IGF superfamily. (PMID: 16890402) Emtage P. … Tang Y.T. (Genomics 2006) 3 4 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3
  3. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for IGFL2 Gene

Sources for IGFL2 Gene

Back to Top

Content