IGFBPL1 Gene
protein-coding GIFtS : 44
GCID: GC09 M038396
insulin-like growth factor binding protein-like 1
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Aliasesfor IGFBPL1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Insulin-Like Growth Factor Binding Protein-Like 1 1 2 IGFBP-RP42 BA113O24.11 Insulin-Like Growth Factor Binding Protein Related Protein 42 Insulin-Like Growth Factor-Binding-Related Protein 42 3 Insulin-Like Growth Factor-Binding Protein-Like 12 IGFBPRP42 3 IGFBP-RP42 IGFBP-Related Protein 102 3
Export aliases for IGFBPL1 gene to outside databases Previous GC identifer: GC09M038399
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Summariesfor IGFBPL1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: IBPL1_HUMAN, Q8WX77 Function : IGF-binding proteins prolong the half-life of IGFs and have been shown to either inhibit or stimulate thegrowth promoting effects of the IGFs in cell culture. They alter the interaction of IGFs with their cell surface receptors (By similarity). May be a putative tumor suppressor protein
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Genomic Viewsfor IGFBPL1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000009.11 NC_018920.1 NT_008413.18 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the IGFBPL1 gene promoter: SRF AhR Egr-2 Nkx6-1 SRF (504 AA) FOXJ2 (long isoform) FOXJ2 Arnt Other transcription factors Search SABiosciences Chromatin IP Primers for IGFBPL1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat IGFBPL1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 9p13.1 Ensembl cytogenetic band: 9p13.1 HGNC cytogenetic band: 9p12 IGFBPL1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 9 GeneLoc Exon Structure
GeneLoc location for GC09M038396: view genomic region
(about GC identifiers )
Start:
38,408,991 bp from pter
End:
38,424,444 bp from pter
Size:
15,454 bases
Orientation:
minus strand
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Proteinsfor IGFBPL1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: IBPL1_HUMAN, Q8WX77 (See
protein sequence )Recommended Name: Insulin-like growth factor-binding protein-like 1 precursor Size : 278 amino acids; 29005 Da
Subcellular location : SecretedExplore the universe of human proteins at neXtProt for IGFBPL1: NX_Q8WX77 IGFBPL1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_001007564.1 ENSEMBL proteins: ENSP00000366923 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA --
IGFBPL1 for ontologies About GeneDecksing IGFBPL1 Antibody Products: Assay Products for IGFBPL1:
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Protein
Domains / Familiesfor IGFBPL1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
IGFBPL1 for domains About GeneDecksing 5/7 InterPro domains/families (see all 7 ):
Graphical View of Domain Structure for InterPro Entry Q8WX77 ProtoNet protein and cluster: Q8WX77
2 Blocks protein families : IPB003598 Immunoglobulin C-2 type IPB013098 Immunoglobulin I-set UniProtKB/Swiss-Prot: IBPL1_HUMAN, Q8WX77 Similarity : Contains 1 Ig-like C2-type (immunoglobulin-like) domainSimilarity : Contains 1 IGFBP N-terminal domainSimilarity : Contains 1 Kazal-like domain
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Functionfor IGFBPL1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: IBPL1_HUMAN, Q8WX77 Function : IGF-binding proteins prolong the half-life of IGFs and have been shown to either inhibit or stimulate thegrowth promoting effects of the IGFs in cell culture. They alter the interaction of IGFs with their cell surface receptors (By similarity). May be a putative tumor suppressor protein Induction : Down-regulated in multiple tumors
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: IGFBPL1 (NM_001007563 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for IGFBPL1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat IGFBPL1
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005520 insulin-like growth factor binding
IEA --
IGFBPL1 for ontologies About GeneDecksing
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Pathways & Interactionsfor IGFBPL1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for IGFBPL1 Gene Ontology (GO): 1 biological process term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0001558 regulation of cell growth
IEA --
IGFBPL1 for ontologies About GeneDecksing
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Drugs & Compoundsfor IGFBPL1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for IGFBPL1 Search CenterWatch for drugs/clinical trials and news about IGFBPL1 / IBPL1
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Transcriptsfor IGFBPL1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
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siRNAs from
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Tagged/untagged cDNA clones from
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SwitchGear Genomics ,
GenScript ,
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Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for IGFBPL1 gene: NM_001007563.2 Unigene Cluster for IGFBPL1:
Insulin-like growth factor binding protein-like 1 Hs.349705 [show with all ESTs ] Unigene Representative Sequence: AK131521 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000377694 (uc004aba.3 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: IGFBPL1 (NM_001007563 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for IGFBPL1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat IGFBPL1
Additional cDNA sequence: AK055716.1 AK131521.1
2 DOTS entries : DT.102823294 DT.95153867
24/65 AceView cDNA sequences (see all 65 ):
AI424991 AA676754 AW089149 BE857533 CR595424 AI863108 AA598689 BQ899312 CR607939 Z41952 Z38240 AA620528 AI364268 BU956478 BX396150 BQ425046 BU680001 BE263253 BM674526 BM716864 AW090733 BX371609 BM701473 BQ681660 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for IGFBPL1 About this scheme ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b SP1 :     -   -             SP2 :             -       SP3 :                  
ECgene alternative splicing isoforms for IGFBPL1
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Expression for IGFBPL1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section IGFBPL1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ATGTCACGAC
About this image IGFBPL1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See IGFBPL1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for IGFBPL1 SOURCE GeneReport for Unigene cluster: Hs.349705 UniProtKB/Swiss-Prot: IBPL1_HUMAN, Q8WX77 Tissue specificity : Expressed at the highest level in both brain and testis, with lower levels in the prostate, bladderand lung SABiosciences Custom PCR Arrays for IGFBPL1 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for IGFBPL1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat IGFBPL1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat IGFBPL1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat IGFBPL1
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Orthologsfor IGFBPL1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for IGFBPL1 gene from 1/11 species (see all 11 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
IGFBPL16
--
57(a)
1 ↔ 1
GL343201.1(3959804-4016112)
ENSEMBL Gene Tree for IGFBPL1 (if available)TreeFam Gene Tree for IGFBPL1 (if available)
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Paralogsfor IGFBPL1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for IGFBPL1 gene KAZALD1 2 IGFBP7 2 2 SIMAP similar genes for IGFBPL1 using alignment to 1 protein entry: IBPL1_HUMAN :IGFBP7 KAZALD1
IGFBPL1 for paralogs About GeneDecksing
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Genomic Variantsfor IGFBPL1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 9 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for IGFBPL1 (38408991 - 38424444 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 2 variations for IGFBPL1 2 CNVs : 33092 47939
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing IGFBPL1
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Disorders
/ Diseasesfor IGFBPL1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
IGFBPL1 for disorders About GeneDecksing
OMIM gene information: 610413
OMIM disorders : --2 diseases for IGFBPL1 : About MalaCards breast cancer prostatitis Export disorders for IGFBPL1 gene to outside databases
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Publicationsfor IGFBPL1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for IGFBPL1 gene integrated from 9 sources : (articles sorted by number of sources associating them with IGFBPL1) Utopia : connect your pdf to the dynamic world of online information
Identification of a novel insulin-like growth factor binding protein gene homologue with tumor suppressor like properties. (PubMed id 15845387) 1 , 2 Cai Z.... Dedera D.A. (2005) Epigenetic inactivation implies independent functions for insulin-like growth factor binding protein (IGFBP)-related protein 1 and the related IGFBPL1 in inhibiting breast cancer phenotypes. (PubMed id 17634530) 1 Smith P....Crook T. (2007) Involvement of insulin-like growth factor-binding protein-related protein 1 in decidualization of human endometrial stromal cells. (PubMed id 17884839) 1 Kutsukake M....Tamura K. (2007) DNA sequence and analysis of human chromosome 9. (PubMed id 15164053) 2 Humphray S.J.... Dunham I. (2004)
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External Searches for IGFBPL1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing IGFBPL1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing IGFBPL1 gene
(According to HUGE )
About This Section --
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Specialized Databases showing IGFBPL1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for IGFBPL1 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for IGFBPL1 gene: Search GeneIP for patents involving IGFBPL1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor IGFBPL1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for IGFBPL1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for IGFBPL1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for IGFBPL1 OriGene Protein Over-expression Lysate for IGFBPL1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for IGFBPL1 OriGene 3'-UTR Clone for IGFBPL1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for IGFBPL1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for IGFBPL1 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for IGFBPL1 OriGene Custom Protein Services for IGFBPL1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat IGFBPL1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing IGFBPL1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat IGFBPL1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat IGFBPL1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat IGFBPL1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat IGFBPL1
Search Tocris compounds for IGFBPL1
IGFBPL1 Proteins, Antibodies, CLIAs, and ELISAs
Search ThermoFisher Antibodies for IGFBPL1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat IGFBPL1
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Aliases for IGFBPL1
Databases for IGFBPL1
Disorders / Diseases for IGFBPL1
Domains / Families for IGFBPL1
Drugs / Compounds for IGFBPL1
Expression for IGFBPL1
Function for IGFBPL1
Genomic Views for IGFBPL1
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Orthologs for IGFBPL1
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Pathways / Interactions for IGFBPL1
Products for IGFBPL1
Proteins for IGFBPL1
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Search Box for IGFBPL1
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Variants for IGFBPL1
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