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Aliases & Descriptions for IGFBP2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BP2 3 IBP-2 3 IBP2 2 , 3 IGF-BP53 2 IGFBP-2 3
Descriptions IGF-binding protein 2 3 insulin-like growth factor binding protein 2 (36kD) 1 , 2 insulin-like growth factor binding protein 2, 36kDa 2
Search outside databases for aliases for IGFBP2 genePrevious GC identifers: GC02P215595 GC02P216219 GC02P217462 GC02P217700 GC02P217323
Summaries for IGFBP2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: IBP2_HUMAN, P18065 Function : IGF-binding proteins prolong the half-life of the IGFs and have been shown to eitherinhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter theinteraction of IGFs with their cell surface receptors
Gene Wiki entry for IGFBP2
Genomic Location for IGFBP2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the IGFBP2 gene Entrez Gene cytogenetic band: 2q33-q34 Ensembl cytogenetic band: 2q35 HGNC cytogenetic band: 2q33-q34 IGFBP2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P217206:
(about GC identifiers )
Start:
217,206,372 bp from pter
End:
217,237,404 bp from pter
Size:
31,033 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_005403.16 Proteins for IGFBP2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: IBP2_HUMAN, P18065 (See
protein sequence )Recommended Name: Insulin-like growth factor-binding protein 2 precursor Size : 328 amino acids; 35138 Da
Subunit : Binds IGF2 more than IGF1
Subcellular location : Secreted
PDB structures from and Proteopedia : 2H7T (3D)
 
Secondary accessions : Q14619 Q9UCL3
Post-translational modifications:
O-glycosylated1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_000588.2 ENSEMBL proteins: ENSP00000233809 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA -- GO:0005615 extracellular space
IEA --
About this table Antibodies for IGFBP2: Assays for IGFBP2:
Protein
Domains/ Families for IGFBP2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P18065 ProtoNet protein and cluster: P18065
2 Blocks protein families : IPB000716 Thyroglobulin type-1 IPB000867 Insulin-like growth factor-binding protein UniProtKB/Swiss-Prot: IBP2_HUMAN, P18065 Similarity : Contains 1 IGFBP N-terminal domainSimilarity : Contains 1 thyroglobulin type-1 domain
Gene Function for IGFBP2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
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Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000597 Applied Biosystems Silencer ® siRNAs for IGFBP2 Sigma-Aldrich siRNA and siRNA Panels for IGFBP2 Sigma-Aldrich shRNA Panels and shRNA for IGFBP2 Explore Sigma-Aldrich super-pooled esiRNAs               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000597                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000597                                  untagged cDNA clone in CMV expression vector: NM_000597  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000597 UniProtKB/Swiss-Prot: IBP2_HUMAN, P18065 Function : IGF-binding proteins prolong the half-life of the IGFs and have been shown to eitherinhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter theinteraction of IGFs with their cell surface receptors
Genatlas biochemistry entry for IGFBP2 :insulin-like growth factor binding protein 2 ,high affinity,regulator of somatic growth andcellular proliferation,major IGFBP of the spinal fluid expressed by multiple neural tissues,highlyexpressed in infancy and older age adult,deregulated in pancreatic beta cell tumorigenesis
6 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Igfbp2) :2 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0031994 insulin-like growth factor I binding
IEA -- GO:0031995 insulin-like growth factor II binding
IEA --
About this table
Pathways & Interactions for IGFBP2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for IGFBP2 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for IGFBP2 5/17 Interacting proteins for IGFBP2 (ENSP00000233809 3 ) via UniProtKB, MINT, and/or STRING (see all 17
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0001558 regulation of cell growth
IEA -- GO:0007165 signal transduction
IEA --
About this table
Drugs & Compounds for IGFBP2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for IGFBP2
Browse Tocris compounds for IGFBP2 10/39 Novoseek chemical compound relationships for IGFBP2 gene (see all 39
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
ribonucleic acid
50.19
7
7519190 (2), 9435438 (2), 8550786 (1), 8949894 (1)
c-peptide
50.04
16
17285578 (4), 11808715 (4), 8887130 (2), 12708727 (1) (see all 9 )
androstenedione
42.51
10
11831514 (2), 11906932 (2), 9166698 (2), 14668202 (1) (see all 6 )
estradiol
40.53
18
17289850 (3), 11831514 (2), 7508947 (1), 12876417 (1) (see all 13 )
procollagen
32.06
6
12201833 (1), 12519882 (1), 9745414 (1), 15546908 (1)
progesterone
31.85
27
1719019 (4), 15809018 (3), 1706350 (2), 11906932 (1) (see all 12 )
glucose
26.90
18
18565922 (4), 12496045 (2), 16556765 (2), 16915540 (2) (see all 12 )
thymidine
24.88
5
9169346 (2), 15994346 (1), 16684509 (1)
ltd4
19.36
4
8997273 (2)
steroid
17.37
12
1719019 (3), 1706350 (1), 15790698 (1), 1711826 (1) (see all 5 )
About this table
Transcripts for IGFBP2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000597 Sigma-Aldrich siRNA and siRNA Panels for IGFBP2 Sigma-Aldrich shRNA Panels and shRNA for IGFBP2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_000597
REFSEQ mRNAs for IGFBP2 gene: NM_000597.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000597
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000597                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000597                                  untagged cDNA clone in CMV expression vector: NM_000597  
Additional cDNA sequence: AB209509.1 BC004312.1 BC009902.1 BC012769.1 BC071967.1 CR590929.1 CR592781.1 CR593872.1 CR594311.1 CR595316.1 CR596315.1 CR601197.1 CR602232.1 CR603359.1 CR603558.1 CR603833.1 CR605199.1 CR606610.1 CR606726.1 CR606776.1 CR607166.1 CR610845.1 CR611812.1 CR613919.1 CR614828.1 CR617002.1 CR618404.1 CR623237.1 CR624731.1 CR625396.1 CR625740.1 M35410.1 X16302.1
10 DOTS entries : DT.455798 DT.100641719 DT.100644888 DT.97800939 DT.100715276 DT.97765820 DT.100038198 DT.102831825 DT.121020335 DT.95103302
24/412 AceView cDNA sequences (see all 412
):CR606610 CR618404 CR624731 AI817467 BU728144 AA479606 AW161913 BM987735 BF337577 AI401607 BQ226317 CR603359 CR606726 BU168595 BQ218754 AW273491 BG056245 BE464961 AI984402 BG056495 CR605199 CR606776 BU627530 AA035641
highest scoring ESTs for IGFBP2 :X16302 AA028959 AA028960 AA035641 AA035749 AA042827 AA044641 AA045494 AA058887 AA150059
Unigene Cluster for IGFBP2: Insulin-like growth factor binding protein 2, 36kDa Hs.438102 [show with all ESTs ] Unigene Representative Sequence: AB209509 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for IGFBP2 ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b SP1 :     -       -           SP2 :   -   -       -           SP3 :           -           SP4 :                    
About this scheme ECgene alternative splicing isoforms for IGFBP2 1 Ensembl transcript including schematic representation : ENST00000233809
Expression for IGFBP2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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IGFBP2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for IGFBP2 1 / 2 / 3
4 probe-sets matching IGFBP2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GCCTGTACAASOURCE GeneReport for Unigene cluster: Hs.438102 Expression variation in blood from EXPOLDB for IGFBP2
Orthologs for IGFBP2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for IGFBP2 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for IGFBP2 ENSEMBL Gene Tree for IGFBP2 Paralogs for IGFBP2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for IGFBP2 gene IGFBP1 2 IGFBP4 2
SNPs/Variants for IGFBP2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for IGFBP2 (up to first 250kb)
Disorders & Mutations for IGFBP2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 146731 10/94 Novoseek disease relationships for IGFBP2 gene (see all 94
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
growth failure
52.01
1
8792402 (1)
astrocytoma grade i
50.83
2
16896313 (1), 17285230 (1)
aml childhood
48.96
2
16444283 (1), 18452107 (1)
growth retardation
43.31
3
11248742 (1), 7581967 (1), 1371449 (1)
anaplastic oligodendroglioma
42.54
2
10485462 (1)
osteosclerosis
40.50
3
9920116 (1), 12162999 (1)
growth hormone deficiency
39.17
5
17223998 (1), 7564158 (1), 8775218 (1), 11150883 (1) (see all 5 )
prostate cancer
39.17
63
12672024 (7), 12684767 (4), 11821468 (4), 15479293 (4) (see all 24 )
hypoglycemia
38.47
4
1697608 (2), 8772589 (1), 12161524 (1)
atresia
38.03
8
8949894 (3), 9096890 (2), 8612491 (1), 8964586 (1) (see all 5 )
About this table Genetic Association Database: IGFBP2 Human Genome Epidemiology Navigator: IGFBP2 (14 documents)
Medical News for IGFBP2 (Possibly Related Articles in
Doctor's Guide )
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Publications for IGFBP2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/636 PubMed articles for IGFBP2 gene (see all 636
): Isolation from adult human serum of four insulin-like growth factor (IGF) binding proteins and molecular cloning of one of them that is increased by IGF I administration and in extrapancreatic tumor hypoglycemia. (PubMed id 1697583) 2, 3, 4 Zapf J.... Froesch E.R. (1990) Structure, dynamics and heparin binding of the C-terminal domain of insulin-like growth factor-binding protein-2 (IGFBP-2). (PubMed id 17020769) 1, 3, 4 Kuang Z....Norton R.S. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Structure of the human insulin-like growth factor binding protein-2 gene. (PubMed id 1376411) 3, 4 Binkert C.... Schwander J. (1992) Purification from human cerebrospinal fluid of insulin-like growth factor binding proteins (IGFBPs). Isolation of IGFBP-2, an altered form of IGFBP-3 and a new IGFBP species. (PubMed id 1726837) 3, 4 Roghani M.... Binoux M. (1991) Structure and localization of the human insulin-like growth factor- binding protein 2 gene. (PubMed id 1710112) 3, 4 Ehrenborg E.... Luthman H. (1991) Sequence analysis, expression and chromosomal localization of a gene, isolated from a subtracted human retina cDNA library, that encodes an insulin-like growth factor binding protein (IGFBP2). (PubMed id 1712312) 3, 4 Agarwal N....Swaroop A. (1991) Cloning, sequence analysis and expression of a cDNA encoding a novel insulin-like growth factor binding protein (IGFBP-2). (PubMed id 2479552) 3, 4 Binkert C.... Heinrich G. (1989) Variables controlling the secretion of insulin-like growth factor binding protein-2 in normal human subjects. (PubMed id 1716260) 1, 3 Clemmons D.R....Busby W.H. (1991) Insulin-like growth factor-binding protein-2 in patients with prostate carcinoma and benign prostatic hyperplasia. (PubMed id 9156044) 1, 3 Ho P.J. and Baxter R.C. (1997)
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Genome Databases showing IGFBP2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing IGFBP2
(According to HUGE )
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--
Specialized Databases showing IGFBP2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for IGFBP2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for IGFBP2:
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Disorders for IGFBP2
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Drugs/Compounds for IGFBP2
Expression for IGFBP2
Function for IGFBP2
Location for IGFBP2
Medical News for IGFBP2
Orthologs for IGFBP2
Paralogs for IGFBP2
Pathways/Interactions for IGFBP2
Proteins for IGFBP2
Publications for IGFBP2
SNPs for IGFBP2
Search Box for IGFBP2
Services for IGFBP2
Summaries for IGFBP2
Technologies for IGFBP2
Transcripts for IGFBP2
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009