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Aliases & Descriptions for IGF2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases C11orf43 2 FLJ22066 2 FLJ44734 1 , 2 IGF-II 3 INSIGF 2 OTTHUMP00000011012 2 OTTHUMP00000011015 2 OTTHUMP00000011018 2 OTTHUMP00000011157 2 Somatomedin-A 3 pp9974 2
Descriptions chromosome 11 open reading frame 43 1 insulin-like growth factor 2 2 insulin-like growth factor 2 (somatomedin A) 2 insulin-like growth factor II 2 insulin-like growth factor type 2 2 putative insulin-like growth factor II associated protein 2 somatomedin A 2
Search outside databases for aliases for IGF2 genePrevious GC identifers: GC11P000574 GC11M002241 GC11M002112 GC11M002118 GC11M002110
Summaries for IGF2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for IGF2 : This gene encodes a member of the insulin family of polypeptide growth factors that is involved indevelopment and growth. It is an imprinted gene and is expressed only from the paternallyinherited allele. It is a candidate gene for eating disorders. There is a read-through, INS-IGF2,which aligns to this gene at the 3' region and to the upstream INS gene at the 5'region. Alternatively spliced transcript variants, encoding either the same or different isoform,have been found for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: IGF2_HUMAN, P01344 Function : Preptin undergoes glucose-mediated co-secretion with insulin, and acts as physiologicalamplifier of glucose-mediated insulin secretion. Exhibits osteogenic properties by increasingosteoblast mitogenic activity through phosphoactivation of MAPK1 and MAPK3
Gene Wiki entry for IGF2 (Insulin-like_growth_factor_2)
Genomic Location for IGF2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the IGF2 gene Entrez Gene cytogenetic band: 11p15.5 Ensembl cytogenetic band: 11p15.5 HGNC cytogenetic band: 11p15.5 IGF2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11M002113:
(about GC identifiers )
Start:
2,106,918 bp from pter
End:
2,127,409 bp from pter
Size:
20,492 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000011.8 NT_009237.17 Proteins for IGF2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: IGF2_HUMAN, P01344 (See
protein sequence )Recommended Name: Insulin-like growth factor II precursor Size : 180 amino acids; 20140 Da
Subcellular location : Secreted
Mass spectrometry : Mass=7469.4; Method=MALDI; Range=25-91; Source=PubMed:12586351, PubMed:15359740;
Mass spectrometry : Mass=7398.3; Method=MALDI; Range=26-91; Source=PubMed:12586351, PubMed:15359740;
PDB structures from and Proteopedia : 1GF2 (3D)
 1IGL (3D)
 2V5P (3D)
 
Secondary accessions : P78449 Q14299 Q1WM26 Q9UC68 Q9UC69Alternative splicing : 2 isoforms : P01344-1 P01344-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_000603.1 NP_001007140.2 NP_001121070.1 ENSEMBL proteins: ENSP00000370799 ENSP00000370796 ENSP00000348986 ENSP00000370786 ENSP00000370802 ENSP00000338297 ENSP00000300632 ENSP00000370813 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA -- GO:0005615 extracellular space
IEA --
About this table Antibodies for IGF2: Assays for IGF2:
Protein
Domains/ Families for IGF2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P01344 ProtoNet protein and cluster: P01344
2 Blocks protein families : IPB004825 Insulin/IGF/relaxin IPB013576 Insulin-like growth factor II E-peptide UniProtKB/Swiss-Prot: IGF2_HUMAN, P01344 Similarity : Belongs to the insulin family
Gene Function for IGF2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001007139 Applied Biosystems Silencer ® siRNAs for IGF2 Sigma-Aldrich siRNA and siRNA Panels for IGF2 Sigma-Aldrich shRNA for IGF2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_000612                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_000612                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_000612  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001127598 UniProtKB/Swiss-Prot: IGF2_HUMAN, P01344 Function : The insulin-like growth factors possess growth-promoting activity. In vitro, they arepotent mitogens for cultured cells. IGF-II is influenced by placental lactogen and may play a rolein fetal development Function : Preptin undergoes glucose-mediated co-secretion with insulin, and acts as physiologicalamplifier of glucose-mediated insulin secretion. Exhibits osteogenic properties by increasingosteoblast mitogenic activity through phosphoactivation of MAPK1 and MAPK3
Genatlas biochemistry entry for IGF2 :insulin-like growth factor 220kDa,regulator of somatic growth and cellular proliferation,maternallyimprinted (telomeric imprinting domain at 11p15,containing ASCL2,H19 and IGF2,silenced andhypermethylated in most Wilms tumor),since the preimplantation 8-cells stageembryos,onwards;biallelic expression and loss of imprinting in fetal brain,in Wilmstumor,Beckwith-Wiedemann syndrome,other tumors and acute myeloid leukemia
15/24 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Igf2) (see all 24
):5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for IGF2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for IGF2 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for IGF2 1 Interacting protein for IGF2 (P01344 2 ) via UniProtKB, MINT, and/or STRING About this table 5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
):
About this table
Drugs & Compounds for IGF2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for IGF2
Browse Tocris compounds for IGF2 10/42 Novoseek chemical compound relationships for IGF2 gene (see all 42
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
mannose 6-phosphate
88.54
297
7814388 (6), 1667383 (5), 1969863 (4), 7588242 (4) (see all 99 )
apai
77.96
61
15181035 (3), 10738131 (2), 16339295 (2), 9709972 (2) (see all 37 )
thymidine
56.73
52
7512304 (3), 8188767 (2), 2245040 (2), 1407369 (1) (see all 40 )
ribonucleic acid
56.28
30
9177379 (2), 11297606 (1), 1656313 (1), 8641194 (1) (see all 21 )
apal
55.44
8
9376897 (3), 8252039 (1), 11855150 (1)
peg-10
54.84
4
17989250 (1), 15057899 (1), 18805821 (1), 16778176 (1)
c-peptide
50.63
43
11372411 (5), 10400142 (3), 16981978 (2), 19073970 (2) (see all 24 )
ag 1024
50.07
3
16037379 (1), 14967954 (1)
estradiol
43.11
45
8520621 (4), 14967954 (4), 16891052 (3), 8396578 (2) (see all 30 )
proliferin
42.16
3
1421424 (1), 9202225 (1)
About this table
Transcripts for IGF2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001007139 Sigma-Aldrich siRNA and siRNA Panels for IGF2 Sigma-Aldrich shRNA for IGF2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_000612 NM_001007139 NM_001127598
REFSEQ mRNAs for IGF2 gene (3 alternative transcripts): NM_000612.4 NM_001007139.4 NM_001127598.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000612 NM_001007139 NM_001127598
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_000612                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_000612                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_000612  
Additional cDNA sequence: AY971350.1 BC104421.1 BC127839.1 CR620042.1
24/132 DOTS entries (see all 132
): DT.99926566 DT.95278587 DT.100820923 DT.97869825 DT.99926560 DT.97863654 DT.95278349 DT.91735952 DT.100666628 DT.97850525 DT.420737 DT.99926550 DT.100820911 DT.120755583 DT.97869833 DT.100820920 DT.95249342 DT.95278369 DT.120755649 DT.100820919 DT.109985 DT.100820924 DT.95223278 DT.100820914
24/48 AceView cDNA sequences (see all 48
):T85122 BF933687 BQ651107 BQ367496 N52638 R91389 AA369121 AW878689 BQ651644 S51971 BU683154 AW071552 M17426 BC000531 N72367 H57817 J03242 BQ648159 AW878704 H81229 BG009764 BX495883 BF933134 CR607507
highest scoring ESTs for IGF2 :AW630108 J03242 BC000531 M17426 X06159 AA340446 AA369121 AW411299 AW883539 BF206003
Unigene Clusters for IGF2: Insulin-like growth factor 2 (somatomedin A) Hs.272259 [show with all ESTs ] , Hs.718427 [show with all ESTs ] Unigene Representative Sequences: NM_000612 , BQ647339 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for IGF2 ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c SP1 :   -   -   -     -           SP2 :           -           SP3 :           -           SP4 :     -   -              
About this scheme ECgene alternative splicing isoforms for IGF2 8 Ensembl transcripts including schematic representations : ENST00000381392
ENST00000381389
ENST00000356578
ENST00000381379
ENST00000381395
ENST00000337883
ENST00000300632
ENST00000381406
Expression for IGF2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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IGF2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for IGF2 1 / 2 / 3
12 probe-sets matching IGF2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CCAGCCCCGTSOURCE GeneReport for Unigene clusters: Hs.272259 Hs.718427 Expression variation in blood from EXPOLDB for IGF2
Orthologs for IGF2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for IGF2 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for IGF2 ENSEMBL Gene Tree for IGF2 Paralogs for IGF2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for IGF2 gene IGF1 2
SNPs/Variants for IGF2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for IGF2 (up to first 250kb)
Disorders & Mutations for IGF2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 147470
10/91 Novoseek disease relationships for IGF2 gene (see all 91
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
beckwith-wiedemann syndrome
89.00
71
7943172 (4), 9349812 (4), 8320696 (3), 15314640 (2) (see all 46 )
wilms tumor
78.18
163
8825403 (7), 11717330 (6), 9368508 (5), 12702581 (5) (see all 70 )
embryonal tumor
73.26
16
8618347 (1), 11008203 (1), 8298652 (1), 8618920 (1) (see all 10 )
hypoglycemia
70.97
219
1281841 (4), 9790231 (4), 10586596 (4), 2170553 (4) (see all 97 )
carcinoma adrenocortical
65.33
35
18611974 (3), 11889182 (3), 15241731 (3), 8370710 (3) (see all 20 )
tumors
64.48
1046
7524924 (6), 9477303 (6), 10682323 (6), 8636375 (6) (see all 99 )
hepatoblastoma
60.47
37
7543440 (3), 9462704 (3), 11597130 (3), 17072986 (3) (see all 19 )
laron syndrome
60.31
1
7524822 (1)
cancer embryonal
58.06
1
9484911 (1)
rhabdomyosarcoma
56.87
67
9771969 (4), 2177632 (4), 7499276 (3), 7686519 (3) (see all 31 )
About this table 2 PharmGKB disease relationships for IGF2 gene About this table Genatlas disease: IGF2 hypoglycemia,tumor induced,putative susceptibility factor for obesity in association with INS inBritish population GeneTests: IGF2 Russell-Silver Syndrome Human Gene Mutation Database : IGF2 Genetic Association Database: IGF2 Human Genome Epidemiology Navigator: IGF2 (53 documents)
Medical News for IGF2 (Possibly Related Articles in
Doctor's Guide )
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Publications for IGF2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1949 PubMed articles for IGF2 gene (see all 1949
): Isolation of an insulin-like growth factor II cDNA with a unique 5' untranslated region from human placenta. (PubMed id 2450353) 2, 3, 4 Shen S.-J.... Ilan J. (1988) Differential expression of the human insulin-like growth factor II gene. Characterization of the IGF-II mRNAs and an mRNA encoding a putative IGF-II-associated protein. (PubMed id 3167054) 2, 3, 4 de Pagter-Holthuizen P....Sussenbach J.S. (1988) Glutathione S-transferase M1 gene but not insulin-like growth factor-2 gene or epidermal growth factor gene is associated with prostate cancer. (PubMed id 16018936) 1, 3, 6 Lai M.T....Chen W.C. (2005) Polymorphism in IGF-2 as a surrogate marker for predisposition towards tobacco chewing-mediated oral cancer. (PubMed id 15970649) 1, 3, 6 Kaur R....Das B.R. (2005) Association of the polycystic ovary syndrome with genomic variants related to insulin resistance, type 2 diabetes mellitus, and obesity. (PubMed id 15181035) 1, 3, 6 San Millan J.L....Escobar-Morreale H.F. (2004) An association between variants in the IGF2 gene and Beckwith-Wiedemann syndrome: interaction between genotype and epigenotype. (PubMed id 14645199) 1, 3, 6 Murrell A....Reik W. (2004) Polymorphism of the insulin gene is associated with increased prostate cancer risk. (PubMed id 12610512) 1, 3, 6 Ho G.Y....Chua S.C. (2003) Replication of IGF2-INS-TH*5 haplotype effect on obesity in older men and study of related phenotypes. (PubMed id 16251897) 1, 3, 6 Rodriguez S....Day I.N. (2006) Imprinting of IGF2 P0 transcript and novel alternatively spliced INS- IGF2 isoforms show differences between mouse and human. (PubMed id 16531418) 1, 3, 4 Monk D.... Moore G.E. (2006) Single-nucleotide polymorphisms and haplotype LD analysis of the 29-kb IGF2 region on chromosome 11p15.5 in the Korean population. (PubMed id 16166779) 1, 3, 6 Lee H.J....Lee J.Y. (2005)
Search for IGF2
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Genome Databases showing IGF2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing IGF2
(According to HUGE )
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Specialized Databases showing IGF2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
ATLAS Chromosomes in Cancer entry for IGF2 Genetics and Cytogenetics in Oncology and Haematology GeneReviews http://www.genetests.org/query?gene=IGF2 Wikipedia http://en.wikipedia.org/wiki/Insulin-like_growth_factor_2 SeattleSNPs http://pga.gs.washington.edu/data/igf2/
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-- Services for IGF2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for IGF2:
Recombinant Proteins (IGF2 ) Antibodies (IGF2 )
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009