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Aliases for IFNWP2 Gene

Subcategory (RNA class) for IFNWP2 Gene

lncRNA

Aliases for IFNWP2 Gene

  • Interferon Omega 1 Pseudogene 2 2 3 5
  • Interferon, Omega 2 (Pseudogene) 2

External Ids for IFNWP2 Gene

ORGUL Members for IFNWP2 Gene

Previous GeneCards Identifiers for IFNWP2 Gene

  • GC00U990164
  • GC09U900646
  • GC09P021421
  • GC09P021383
  • GC09P021422
  • GC09P021423
  • GC09P021426
  • GC09P021429
  • GC09P021433

Summaries for IFNWP2 Gene

GeneCards Summary for IFNWP2 Gene

IFNWP2 (Interferon Omega 1 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNWP2 Gene

Genomics for IFNWP2 Gene

Regulatory Elements for IFNWP2 Gene

Enhancers for IFNWP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F021252 1 Ensembl ENCODE 11.7 -167.0 -167031 0.8 CTCF PKNOX1 ZNF654 TRIM22 RAD21 SMARCA4 SMC3 PRDM1 IFNA12P IFNA8 IFNWP2 IFNA13 IFNA20P IFNA14 IFNA22P
GH09F021450 0.2 ENCODE 11.5 +31.3 31349 1.4 CEBPB NFE2L2 IFNWP2 IFNA8 IFNA12P IFNA13 IFNA5 IFNWP19
GH09F021333 0.2 ENCODE 11 -86.2 -86238 0.2 CHD1 IFNA13 IFNA5 IFNA12P IFNA8 IFNWP2 KLHL9 IFNA20P
GH09F021334 0.5 ENCODE 11 -85.1 -85147 1.8 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 GLIS2 IFNA13 IFNA5 IFNA12P IFNA8 IFNWP2 KLHL9 IFNA20P
GH09F021268 0.4 Ensembl 10.8 -152.0 -152034 0.4 MTA2 IKZF1 CBX2 BMI1 EBF1 TBX21 SPI1 IFNA5 IFNA12P IFNA8 IFNWP2 IFNA13 MIR31 IFNA22P IFNA14
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IFNWP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for IFNWP2 Gene

Chromosome:
9
Start:
21,420,234 bp from pter
End:
21,420,813 bp from pter
Size:
580 bases
Orientation:
Plus strand

Genomic View for IFNWP2 Gene

Genes around IFNWP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNWP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNWP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNWP2 Gene

Proteins for IFNWP2 Gene

Post-translational modifications for IFNWP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNWP2 Gene

Domains & Families for IFNWP2 Gene

Gene Families for IFNWP2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IFNWP2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFNWP2 Gene

Function for IFNWP2 Gene

Molecular function for IFNWP2 Gene

GENATLAS Biochemistry:
interferon type I,omega pseudogene 2,leukocyte

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNWP2 Gene

Localization for IFNWP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IFNWP2 Gene

Pathways & Interactions for IFNWP2 Gene

SuperPathways for IFNWP2 Gene

No Data Available

Interacting Proteins for IFNWP2 Gene

Gene Ontology (GO) - Biological Process for IFNWP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFNWP2 Gene

Transcripts for IFNWP2 Gene

mRNA/cDNA for IFNWP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IFNWP2 Gene

No ASD Table

Relevant External Links for IFNWP2 Gene

GeneLoc Exon Structure for
IFNWP2
ECgene alternative splicing isoforms for
IFNWP2

Expression for IFNWP2 Gene

mRNA expression in normal human tissues for IFNWP2 Gene

mRNA differential expression in normal tissues according to GTEx for IFNWP2 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x9.6), Brain - Cortex (x6.1), Brain - Cerebellar Hemisphere (x5.9), Brain - Cerebellum (x5.8), Testis (x5.0), and Brain - Anterior cingulate cortex (BA24) (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of IFNWP2 Gene:

IFNWP2
genes like me logo Genes that share expression patterns with IFNWP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IFNWP2 Gene

Orthologs for IFNWP2 Gene

Evolution for IFNWP2 Gene

ENSEMBL:
Gene Tree for IFNWP2 (if available)
TreeFam:
Gene Tree for IFNWP2 (if available)

No data available for Orthologs for IFNWP2 Gene

Paralogs for IFNWP2 Gene

No data available for Paralogs for IFNWP2 Gene

Variants for IFNWP2 Gene

Relevant External Links for IFNWP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFNWP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFNWP2 Gene

Disorders for IFNWP2 Gene

No disorders were found for IFNWP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFNWP2 Gene

Publications for IFNWP2 Gene

  1. Structure of the human type-I interferon gene cluster determined from a YAC clone contig. (PMID: 8001965) DA-az M.O. … Olopade O.I. (Genomics 1994) 2 3 64
  2. Characterization of the type I interferon locus and identification of novel genes. (PMID: 15233997) Hardy M.P. … Hertzog P.J. (Genomics 2004) 3 64

Products for IFNWP2 Gene

Sources for IFNWP2 Gene

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