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Aliases for IFNNP1 Gene

Subcategory (RNA class) for IFNNP1 Gene

lncRNA

Aliases for IFNNP1 Gene

  • Interferon Nu 1, Pseudogene 2 3 5
  • Interferon, Nu 1 (Pseudogene) 2

External Ids for IFNNP1 Gene

ORGUL Members for IFNNP1 Gene

Previous GeneCards Identifiers for IFNNP1 Gene

  • GC09U900798
  • GC09M021059
  • GC09M021060

Summaries for IFNNP1 Gene

GeneCards Summary for IFNNP1 Gene

IFNNP1 (Interferon Nu 1, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNNP1 Gene

Genomics for IFNNP1 Gene

Regulatory Elements for IFNNP1 Gene

Enhancers for IFNNP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F021060 0.8 Ensembl ENCODE 0.8 -1.9 -1879 0.8 CTCF IKZF1 MAX MYC SPI1 HACD4 IFNNP1 IFNB1
GH09F021069 0.9 Ensembl ENCODE 0.4 -10.8 -10835 1.3 CTCF JUN BHLHE40 EP300 JUND MAFF FOS MAFK PRDM1 NFE2L2 HACD4 IFNB1 IFNNP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around IFNNP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for IFNNP1 Gene

Chromosome:
9
Start:
21,058,771 bp from pter
End:
21,059,323 bp from pter
Size:
553 bases
Orientation:
Minus strand

Genomic View for IFNNP1 Gene

Genes around IFNNP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNNP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNNP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNNP1 Gene

Proteins for IFNNP1 Gene

Post-translational modifications for IFNNP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNNP1 Gene

Domains & Families for IFNNP1 Gene

Gene Families for IFNNP1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IFNNP1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFNNP1 Gene

Function for IFNNP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNNP1 Gene

Localization for IFNNP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IFNNP1 Gene

Pathways & Interactions for IFNNP1 Gene

SuperPathways for IFNNP1 Gene

No Data Available

Interacting Proteins for IFNNP1 Gene

Gene Ontology (GO) - Biological Process for IFNNP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFNNP1 Gene

Transcripts for IFNNP1 Gene

mRNA/cDNA for IFNNP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IFNNP1 Gene

No ASD Table

Relevant External Links for IFNNP1 Gene

GeneLoc Exon Structure for
IFNNP1
ECgene alternative splicing isoforms for
IFNNP1

Expression for IFNNP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IFNNP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of IFNNP1 Gene:

IFNNP1
genes like me logo Genes that share expression patterns with IFNNP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IFNNP1 Gene

Orthologs for IFNNP1 Gene

Evolution for IFNNP1 Gene

ENSEMBL:
Gene Tree for IFNNP1 (if available)
TreeFam:
Gene Tree for IFNNP1 (if available)

No data available for Orthologs for IFNNP1 Gene

Paralogs for IFNNP1 Gene

No data available for Paralogs for IFNNP1 Gene

Variants for IFNNP1 Gene

Relevant External Links for IFNNP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFNNP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFNNP1 Gene

Disorders for IFNNP1 Gene

No disorders were found for IFNNP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFNNP1 Gene

Publications for IFNNP1 Gene

  1. Evolution of the Class 2 cytokines and receptors, and discovery of new friends and relatives. (PMID: 15922016) Krause C.D. … Pestka S. (Pharmacol. Ther. 2005) 2 3 64

Products for IFNNP1 Gene

Sources for IFNNP1 Gene

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