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Aliases for IFNG-AS1 Gene

Subcategory (RNA class) for IFNG-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for IFNG-AS1 Gene

  • IFNG Antisense RNA 1 2 3
  • Theilers Murine Encephalomyelitis Virus Persistence Candidate Gene 1 2 3
  • IFNG Antisense RNA 1 (Non-Protein Coding) 2 3
  • LincR-Ifng-3AS 3
  • GS1-410F4.2 3
  • Tmevpg1 3

External Ids for IFNG-AS1 Gene

ORGUL Members for IFNG-AS1 Gene

Summaries for IFNG-AS1 Gene

GeneCards Summary for IFNG-AS1 Gene

IFNG-AS1 (IFNG Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNG-AS1 Gene

Genomics for IFNG-AS1 Gene

Genomic Location for IFNG-AS1 Gene

Start:
67,989,445 bp from pter
End:
68,234,686 bp from pter
Size:
245,242 bases
Orientation:
Plus strand

Genomic View for IFNG-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IFNG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNG-AS1 Gene

No data available for Regulatory Elements for IFNG-AS1 Gene

Proteins for IFNG-AS1 Gene

Post-translational modifications for IFNG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNG-AS1 Gene

Domains for IFNG-AS1 Gene

Gene Families for IFNG-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with IFNG-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for IFNG-AS1 Gene

Function for IFNG-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for IFNG-AS1 Gene

Localization for IFNG-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for IFNG-AS1 Gene

Pathways for IFNG-AS1 Gene

SuperPathways for IFNG-AS1 Gene

No Data Available

Interacting Proteins for IFNG-AS1 Gene

Gene Ontology (GO) - Biological Process for IFNG-AS1 Gene

None

No data available for Pathways by source for IFNG-AS1 Gene

Transcripts for IFNG-AS1 Gene

mRNA/cDNA for IFNG-AS1 Gene

(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IFNG-AS1 Gene

IFNG antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IFNG-AS1 Gene

No ASD Table

Relevant External Links for IFNG-AS1 Gene

GeneLoc Exon Structure for
IFNG-AS1
ECgene alternative splicing isoforms for
IFNG-AS1

Expression for IFNG-AS1 Gene

mRNA expression in normal human tissues for IFNG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IFNG-AS1 Gene

This gene is overexpressed in Spleen (8.9).

SOURCE GeneReport for Unigene cluster for IFNG-AS1 Gene Hs.439832

genes like me logo Genes that share expressions with IFNG-AS1: view

Orthologs for IFNG-AS1 Gene

Evolution for IFNG-AS1 Gene

ENSEMBL:
Gene Tree for IFNG-AS1 (if available)
TreeFam:
Gene Tree for IFNG-AS1 (if available)

No data available for Orthologs for IFNG-AS1 Gene

Paralogs for IFNG-AS1 Gene

No data available for Paralogs for IFNG-AS1 Gene

Variants for IFNG-AS1 Gene

Sequence variations from dbSNP and Humsavar for IFNG-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs740050 -- 68,007,809(+) AGAGA(C/T)AGAGA intron-variant
rs740420 -- 68,007,862(+) GACTT(A/G)GTGCC intron-variant
rs971043 -- 68,018,733(+) AGGCT(G/T)GTTTG intron-variant
rs971044 -- 68,018,939(+) TACCA(C/T)GCCTT intron-variant
rs1019076 -- 68,004,338(+) CTCTC(C/T)CCAGA intron-variant

Relevant External Links for IFNG-AS1 Gene

HapMap Linkage Disequilibrium report
IFNG-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for IFNG-AS1 Gene

Disorders for IFNG-AS1 Gene

No disorders were found for IFNG-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for IFNG-AS1 Gene

Publications for IFNG-AS1 Gene

  1. Homology between a 173-kb region from mouse chromosome 10, telomeric to the Ifng locus, and human chromosome 12q15. (PMID: 11735227) Vigneau S. … Bureau J.F. (Genomics 2001) 2 3
  2. Expression and regulation of intergenic long noncoding RNAs during T cell development and differentiation. (PMID: 24056746) Hu G. … Zhao K. (Nat. Immunol. 2013) 2 3
  3. Tmevpg1, a candidate gene for the control of Theiler's virus persistence, could be implicated in the regulation of gamma interferon. (PMID: 12719555) Vigneau S. … Bureau J.F. (J. Virol. 2003) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. Cutting edge: influence of Tmevpg1, a long intergenic noncoding RNA, on the expression of Ifng by Th1 cells. (PMID: 22851706) Collier S.P. … Aune T.M. (J. Immunol. 2012) 3

Products for IFNG-AS1 Gene

Sources for IFNG-AS1 Gene

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