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Aliases for IFNA7 Gene

Aliases for IFNA7 Gene

  • Interferon Alpha 7 2 3
  • Interferon Alpha-J1 3 4
  • Interferon Alpha-J 3 4
  • IFN-Alpha-J1 3 4
  • IFN-Alpha-7 3 4
  • LeIF J 3 4
  • Interferon, Alpha 7 5
  • Interferon Alpha-7 3
  • IFN-Alpha 7 3
  • IFN-AlphaJ 3
  • IFNA-J 3

External Ids for IFNA7 Gene

Previous GeneCards Identifiers for IFNA7 Gene

  • GC09M021529
  • GC09M021402
  • GC09M021191
  • GC09M021214
  • GC09M021224
  • GC09M021164
  • GC09M021228
  • GC09M021234
  • GC09M021237
  • GC09M021241
  • GC09M021244
  • GC09M021247
  • GC09M021251
  • GC09M021256
  • GC09M021261
  • GC09M021265

Summaries for IFNA7 Gene

GeneCards Summary for IFNA7 Gene

IFNA7 (Interferon Alpha 7) is a Protein Coding gene. Among its related pathways are PEDF Induced Signaling and Toll-Like receptor Signaling Pathways. GO annotations related to this gene include cytokine activity and type I interferon receptor binding. An important paralog of this gene is IFNA4.

UniProtKB/Swiss-Prot for IFNA7 Gene

  • Produced by macrophages, IFN-alpha have antiviral activities. Interferon stimulates the production of two enzymes: a protein kinase and an oligoadenylate synthetase.

Gene Wiki entry for IFNA7 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNA7 Gene

Genomics for IFNA7 Gene

Regulatory Elements for IFNA7 Gene

Enhancers for IFNA7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around IFNA7 on UCSC Golden Path with GeneCards custom track

Genomic Location for IFNA7 Gene

Chromosome:
9
Start:
21,201,469 bp from pter
End:
21,202,205 bp from pter
Size:
737 bases
Orientation:
Minus strand

Genomic View for IFNA7 Gene

Genes around IFNA7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNA7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNA7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNA7 Gene

Proteins for IFNA7 Gene

  • Protein details for IFNA7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P01567-IFNA7_HUMAN
    Recommended name:
    Interferon alpha-7
    Protein Accession:
    P01567
    Secondary Accessions:
    • Q14607
    • Q5VV14

    Protein attributes for IFNA7 Gene

    Size:
    189 amino acids
    Molecular mass:
    22107 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IFNA7 Gene

Post-translational modifications for IFNA7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IFNA7 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • Abcam antibodies for IFNA7
  • Cloud-Clone Corp. Antibodies for IFNA7

No data available for DME Specific Peptides for IFNA7 Gene

Domains & Families for IFNA7 Gene

Gene Families for IFNA7 Gene

Suggested Antigen Peptide Sequences for IFNA7 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P01567

UniProtKB/Swiss-Prot:

IFNA7_HUMAN :
  • Belongs to the alpha/beta interferon family.
Family:
  • Belongs to the alpha/beta interferon family.
genes like me logo Genes that share domains with IFNA7: view

Function for IFNA7 Gene

Molecular function for IFNA7 Gene

GENATLAS Biochemistry:
interferon type I,alpha 7,leukocyte
UniProtKB/Swiss-Prot Function:
Produced by macrophages, IFN-alpha have antiviral activities. Interferon stimulates the production of two enzymes: a protein kinase and an oligoadenylate synthetase.

Gene Ontology (GO) - Molecular Function for IFNA7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005125 cytokine activity IBA --
GO:0005132 type I interferon receptor binding TAS 2995168
genes like me logo Genes that share ontologies with IFNA7: view
genes like me logo Genes that share phenotypes with IFNA7: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNA7 Gene

Localization for IFNA7 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IFNA7 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IFNA7 Gene COMPARTMENTS Subcellular localization image for IFNA7 gene
Compartment Confidence
extracellular 5

Gene Ontology (GO) - Cellular Components for IFNA7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IBA --
genes like me logo Genes that share ontologies with IFNA7: view

Pathways & Interactions for IFNA7 Gene

genes like me logo Genes that share pathways with IFNA7: view

Gene Ontology (GO) - Biological Process for IFNA7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002250 adaptive immune response IBA --
GO:0002286 T cell activation involved in immune response IBA --
GO:0002323 natural killer cell activation involved in immune response IBA --
GO:0006959 humoral immune response IBA --
GO:0007267 cell-cell signaling TAS 2995168
genes like me logo Genes that share ontologies with IFNA7: view

No data available for SIGNOR curated interactions for IFNA7 Gene

Drugs & Compounds for IFNA7 Gene

No Compound Related Data Available

Transcripts for IFNA7 Gene

mRNA/cDNA for IFNA7 Gene

(1) REFSEQ mRNAs :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IFNA7 Gene

No ASD Table

Relevant External Links for IFNA7 Gene

GeneLoc Exon Structure for
IFNA7
ECgene alternative splicing isoforms for
IFNA7

Expression for IFNA7 Gene

mRNA expression in normal human tissues for IFNA7 Gene

NURSA nuclear receptor signaling pathways regulating expression of IFNA7 Gene:

IFNA7

SOURCE GeneReport for Unigene cluster for IFNA7 Gene:

Hs.282274
genes like me logo Genes that share expression patterns with IFNA7: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IFNA7 Gene

Orthologs for IFNA7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IFNA7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IFNA7 34
  • 98.06 (n)
  • 95.77 (a)
-- 35
  • 93 (a)
OneToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 61 (a)
ManyToMany
-- 35
  • 61 (a)
ManyToMany
-- 35
  • 62 (a)
ManyToMany
-- 35
  • 61 (a)
ManyToMany
-- 35
  • 60 (a)
ManyToMany
IFNAA 35
  • 60 (a)
ManyToMany
IFNAG 35
  • 61 (a)
ManyToMany
IFNAG 35
  • 62 (a)
ManyToMany
IFNAH 35
  • 62 (a)
ManyToMany
INFAF 35
  • 60 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm12597 35
  • 62 (a)
ManyToMany
Gm13280 35
  • 60 (a)
ManyToMany
Ifna1 35
  • 61 (a)
ManyToMany
Ifna11 35
  • 57 (a)
ManyToMany
Ifna12 35
  • 61 (a)
ManyToMany
Ifna13 35
  • 61 (a)
ManyToMany
Ifna14 35
  • 58 (a)
ManyToMany
Ifna2 35
  • 58 (a)
ManyToMany
Ifna4 35
  • 55 (a)
ManyToMany
Ifna5 35
  • 61 (a)
ManyToMany
Ifna6 35
  • 61 (a)
ManyToMany
Ifna7 35
  • 59 (a)
ManyToMany
Ifna9 35
  • 59 (a)
ManyToMany
Ifnab 35
  • 59 (a)
ManyToMany
Species where no ortholog for IFNA7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for IFNA7 Gene

ENSEMBL:
Gene Tree for IFNA7 (if available)
TreeFam:
Gene Tree for IFNA7 (if available)

Paralogs for IFNA7 Gene

(18) SIMAP similar genes for IFNA7 Gene using alignment to 1 proteins:

Pseudogenes.org Pseudogenes for IFNA7 Gene

genes like me logo Genes that share paralogs with IFNA7: view

Variants for IFNA7 Gene

Sequence variations from dbSNP and Humsavar for IFNA7 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs117970353 -- 21,203,292(+) TACAA(A/G)CTTTT upstream-variant-2KB
rs138442715 -- 21,202,249(+) TCTGT(A/G)CATAG upstream-variant-2KB
rs138587230 -- 21,202,093(+) CAGAT(A/C/T)ACAGC reference, missense
rs10757198 -- 21,202,336(+) TTATG(C/T)ACTCT upstream-variant-2KB
rs10757199 -- 21,202,357(+) TTAAA(G/T)ACGTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for IFNA7 Gene

Variant ID Type Subtype PubMed ID
dgv1253e201 CNV deletion 23290073
dgv7474n100 CNV loss 25217958
esv2738274 CNV deletion 23290073
esv2738277 CNV deletion 23290073
esv2764150 CNV gain+loss 21179565
esv3573167 CNV loss 25503493
esv3619952 CNV loss 21293372
esv3619953 CNV gain 21293372
esv3619954 CNV loss 21293372
esv6326 CNV loss 19470904
nsv1021574 CNV gain 25217958
nsv1033177 CNV gain 25217958
nsv1035128 CNV gain 25217958
nsv1118060 CNV deletion 24896259
nsv516132 CNV loss 19592680
nsv613755 CNV loss 21841781
nsv613756 CNV loss 21841781
nsv8425 CNV gain+loss 18304495
nsv968599 CNV duplication 23825009

Variation tolerance for IFNA7 Gene

Residual Variation Intolerance Score: 65.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.98; 20.11% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for IFNA7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFNA7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IFNA7 Gene

Disorders for IFNA7 Gene

Relevant External Links for IFNA7

Genetic Association Database (GAD)
IFNA7
Human Genome Epidemiology (HuGE) Navigator
IFNA7
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IFNA7

No disorders were found for IFNA7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IFNA7 Gene

Publications for IFNA7 Gene

  1. Identification of interferon-alpha 7, -alpha 14, and -alpha 21 variants in the genome of a large human population. (PMID: 8910771) Hussain M. … Liao M.-J. (J. Interferon Cytokine Res. 1996) 3 4 22 65
  2. Large-scale candidate gene analysis of spontaneous clearance of hepatitis C virus. (PMID: 20331378) Mosbruger T.L. … Thio C.L. (J. Infect. Dis. 2010) 3 46 65
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 65
  4. Identification of nine interferon-alpha subtypes produced by Sendai virus-induced human peripheral blood leucocytes. (PMID: 9425112) Nyman T.A. … Kalkkinen N. (Biochem. J. 1998) 3 4 65
  5. Mapping of the shortest region of overlap of deletions of the short arm of chromosome 9 associated with human neoplasia. (PMID: 1385305) Olopade O.I. … Diaz M.O. (Genomics 1992) 2 3 65

Products for IFNA7 Gene

Sources for IFNA7 Gene

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