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Aliases for IFNA22P Gene

Subcategory (RNA class) for IFNA22P Gene

lncRNA

Aliases for IFNA22P Gene

  • Interferon, Alpha 22, Pseudogene 2 3 5
  • Interferon, Alpha Pseudogene 22 2 3
  • Interferon, Alpha 7 Pseudogene 3
  • IFNAP22 3

External Ids for IFNA22P Gene

ORGUL Members for IFNA22P Gene

Previous HGNC Symbols for IFNA22P Gene

  • IFNAP22

Summaries for IFNA22P Gene

GeneCards Summary for IFNA22P Gene

IFNA22P (Interferon, Alpha 22, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNA22P Gene

Genomics for IFNA22P Gene

Genomic Location for IFNA22P Gene

Chromosome:
9
Start:
21,277,688 bp from pter
End:
21,278,619 bp from pter
Size:
932 bases
Orientation:
Minus strand

Genomic View for IFNA22P Gene

Genes around IFNA22P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNA22P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNA22P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNA22P Gene

No data available for Regulatory Elements for IFNA22P Gene

Proteins for IFNA22P Gene

Post-translational modifications for IFNA22P Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNA22P Gene

Domains & Families for IFNA22P Gene

Gene Families for IFNA22P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IFNA22P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFNA22P Gene

Function for IFNA22P Gene

Phenotypes for IFNA22P Gene

GenomeRNAi human phenotypes for IFNA22P:
genes like me logo Genes that share phenotypes with IFNA22P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNA22P Gene

Localization for IFNA22P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IFNA22P Gene

Pathways & Interactions for IFNA22P Gene

SuperPathways for IFNA22P Gene

No Data Available

Interacting Proteins for IFNA22P Gene

Gene Ontology (GO) - Biological Process for IFNA22P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFNA22P Gene

Drugs & Compounds for IFNA22P Gene

No Compound Related Data Available

Transcripts for IFNA22P Gene

mRNA/cDNA for IFNA22P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IFNA22P Gene

No ASD Table

Relevant External Links for IFNA22P Gene

GeneLoc Exon Structure for
IFNA22P
ECgene alternative splicing isoforms for
IFNA22P

Expression for IFNA22P Gene

mRNA expression in normal human tissues for IFNA22P Gene

SOURCE GeneReport for Unigene cluster for IFNA22P Gene Hs.545842

genes like me logo Genes that share expression patterns with IFNA22P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for IFNA22P Gene

Orthologs for IFNA22P Gene

Evolution for IFNA22P Gene

ENSEMBL:
Gene Tree for IFNA22P (if available)
TreeFam:
Gene Tree for IFNA22P (if available)

No data available for Orthologs for IFNA22P Gene

Paralogs for IFNA22P Gene

No data available for Paralogs for IFNA22P Gene

Variants for IFNA22P Gene

Sequence variations from dbSNP and Humsavar for IFNA22P Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10116936 -- 21,277,551(+) CAACA(G/T)ACAAT downstream-variant-500B
rs10120675 -- 21,278,464(+) CTTCA(A/G)GTAAG nc-transcript-variant
rs10757210 -- 21,277,749(+) CATGT(A/G)TTGTT nc-transcript-variant
rs10964951 -- 21,277,314(+) AGTCA(A/G)TTTAT downstream-variant-500B
rs10964952 -- 21,277,798(+) GAAGA(C/T)TTTAA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for IFNA22P Gene

Variant ID Type Subtype PubMed ID
nsv892724 CNV Gain 21882294
nsv892734 CNV Gain 21882294

Relevant External Links for IFNA22P Gene

HapMap Linkage Disequilibrium report
IFNA22P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for IFNA22P Gene

Disorders for IFNA22P Gene

Relevant External Links for IFNA22P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
IFNA22P

No disorders were found for IFNA22P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IFNA22P Gene

Publications for IFNA22P Gene

  1. Structure of the human type-I interferon gene cluster determined from a YAC clone contig. (PMID: 8001965) DA-az M.O. … Olopade O.I. (Genomics 1994) 2 3 67
  2. Mapping of the shortest region of overlap of deletions of the short arm of chromosome 9 associated with human neoplasia. (PMID: 1385305) Olopade O.I. … Diaz M.O. (Genomics 1992) 2 3
  3. The structure of eight distinct cloned human leukocyte interferon cDNAs. (PMID: 6163083) Goeddel D.V. … Gray P.W. (Nature 1981) 3

Products for IFNA22P Gene

Sources for IFNA22P Gene

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