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Aliases for IFNA20P Gene

Subcategory (RNA class) for IFNA20P Gene

lncRNA

Aliases for IFNA20P Gene

  • Interferon Alpha 20, Pseudogene 2 3 5
  • Interferon Pseudogene 20 2 3
  • IFNP20 3

External Ids for IFNA20P Gene

ORGUL Members for IFNA20P Gene

Previous HGNC Symbols for IFNA20P Gene

  • IFNP20

Previous GeneCards Identifiers for IFNA20P Gene

  • GC09U901630

Summaries for IFNA20P Gene

GeneCards Summary for IFNA20P Gene

IFNA20P (Interferon Alpha 20, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNA20P Gene

Genomics for IFNA20P Gene

Regulatory Elements for IFNA20P Gene

Enhancers for IFNA20P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F021286 0.4 Ensembl 7 -34.2 -34177 1.0 SPI1 IFNA13 IFNA20P IFNA22P IFNA5
GH09F021213 0.6 Ensembl 6.5 -107.2 -107227 0.7 CTCF RAD21 IFNA13 IFNA20P IFNA16 IFNWP18
GH09F021183 0.2 Ensembl 6.4 -137.9 -137869 0.7 CTCF ZNF654 CEBPA TRIM22 PRDM1 RAD21 IFNA20P IFNA4 IFNWP15
GH09F021195 0.2 Ensembl 6.2 -125.7 -125723 0.8 ZNF664 CTCF ZNF654 SMC3 TRIM22 RAD21 IFNA13 IFNA20P IFNWP9 IFNA7
GH09F021252 1 Ensembl ENCODE 5.9 -68.1 -68097 0.8 CTCF PKNOX1 ZNF654 TRIM22 RAD21 SMARCA4 SMC3 PRDM1 IFNA12P IFNA8 IFNWP2 IFNA13 IFNA20P IFNA14 IFNA22P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IFNA20P on UCSC Golden Path with GeneCards custom track

Genomic Location for IFNA20P Gene

Chromosome:
9
Start:
21,321,300 bp from pter
End:
21,321,827 bp from pter
Size:
528 bases
Orientation:
Plus strand

Genomic View for IFNA20P Gene

Genes around IFNA20P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNA20P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNA20P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNA20P Gene

Proteins for IFNA20P Gene

Post-translational modifications for IFNA20P Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNA20P Gene

Domains & Families for IFNA20P Gene

Gene Families for IFNA20P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IFNA20P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFNA20P Gene

Function for IFNA20P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNA20P Gene

Localization for IFNA20P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IFNA20P Gene

Pathways & Interactions for IFNA20P Gene

SuperPathways for IFNA20P Gene

No Data Available

Interacting Proteins for IFNA20P Gene

Gene Ontology (GO) - Biological Process for IFNA20P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFNA20P Gene

Transcripts for IFNA20P Gene

mRNA/cDNA for IFNA20P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IFNA20P Gene

No ASD Table

Relevant External Links for IFNA20P Gene

GeneLoc Exon Structure for
IFNA20P
ECgene alternative splicing isoforms for
IFNA20P

Expression for IFNA20P Gene

mRNA expression in normal human tissues for IFNA20P Gene

NURSA nuclear receptor signaling pathways regulating expression of IFNA20P Gene:

IFNA20P
genes like me logo Genes that share expression patterns with IFNA20P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IFNA20P Gene

Orthologs for IFNA20P Gene

Evolution for IFNA20P Gene

ENSEMBL:
Gene Tree for IFNA20P (if available)
TreeFam:
Gene Tree for IFNA20P (if available)

No data available for Orthologs for IFNA20P Gene

Paralogs for IFNA20P Gene

No data available for Paralogs for IFNA20P Gene

Variants for IFNA20P Gene

Relevant External Links for IFNA20P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFNA20P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFNA20P Gene

Disorders for IFNA20P Gene

No disorders were found for IFNA20P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFNA20P Gene

Publications for IFNA20P Gene

No publications were found for IFNA20P Gene.

Products for IFNA20P Gene

Sources for IFNA20P Gene

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