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Aliases for IFIT6P Gene

Aliases for IFIT6P Gene

  • Interferon Induced Protein With Tetratricopeptide Repeats 6, Pseudogene 2 3 5
  • Interferon-Induced Protein With Tetratricopeptide Repeats 6, Pseudogene 2

External Ids for IFIT6P Gene

Previous GeneCards Identifiers for IFIT6P Gene

  • GC00U930890
  • GC10P090995
  • GC10P084756
  • GC10P091123

Summaries for IFIT6P Gene

GeneCards Summary for IFIT6P Gene

IFIT6P (Interferon Induced Protein With Tetratricopeptide Repeats 6, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFIT6P Gene

Genomics for IFIT6P Gene

Regulatory Elements for IFIT6P Gene

Enhancers for IFIT6P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F089363 0.5 Ensembl 0.8 +1.8 1807 0.6 PKNOX1 NFYB SPI1 IFIT5 IFIT3 IFIT1 ENSG00000232110 LIPA IFIT6P IFIT1B
GH10F089364 0.2 ENCODE 0.8 +0.8 835 0.1 TBL1XR1 TAL1 ARID1B NCOR1 GATA2 SMARCA4 KLF16 KDM1A TRIM24 IFIT3 IFIT1 ENSG00000232110 IFIT5 LIPA IFIT6P IFIT1B
GH10F089368 0.8 Ensembl ENCODE 0.4 +7.1 7107 1.2 CTCF ZNF654 SMC3 TRIM22 RAD21 IFIT5 IFIT1 IFIT3 ENSG00000232110 IFIT2 LIPA IFIT1B IFIT6P
GH10F089367 1 Ensembl ENCODE 0.4 +5.7 5666 1.3 MXI1 MIER1 MTA2 BHLHE40 BMI1 MIER2 REST TBX21 EP300 RAD51 IFIT5 IFIT3 IFIT1 ENSG00000232110 LIPA IFIT6P IFIT1B
GH10F089355 0.7 ENCODE 0.4 -6.6 -6636 0.2 DDX20 ZNF175 BACH1 IRF9 NR2F6 ZNF584 ZNF639 RFX1 NR4A1 NR2F1 ACTA2 IFIT1B ENSG00000232110 IFIT3 IFIT1 IFIT6P LOC101926887
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around IFIT6P on UCSC Golden Path with GeneCards custom track

Genomic Location for IFIT6P Gene

Chromosome:
10
Start:
89,362,294 bp from pter
End:
89,363,487 bp from pter
Size:
1,194 bases
Orientation:
Plus strand

Genomic View for IFIT6P Gene

Genes around IFIT6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFIT6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFIT6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFIT6P Gene

Proteins for IFIT6P Gene

Post-translational modifications for IFIT6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFIT6P Gene

Domains & Families for IFIT6P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFIT6P Gene

Function for IFIT6P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFIT6P Gene

Localization for IFIT6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for IFIT6P Gene

Pathways & Interactions for IFIT6P Gene

SuperPathways for IFIT6P Gene

No Data Available

Interacting Proteins for IFIT6P Gene

Gene Ontology (GO) - Biological Process for IFIT6P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFIT6P Gene

Transcripts for IFIT6P Gene

mRNA/cDNA for IFIT6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IFIT6P Gene

No ASD Table

Relevant External Links for IFIT6P Gene

GeneLoc Exon Structure for
IFIT6P
ECgene alternative splicing isoforms for
IFIT6P

Expression for IFIT6P Gene

mRNA expression in normal human tissues for IFIT6P Gene

NURSA nuclear receptor signaling pathways regulating expression of IFIT6P Gene:

IFIT6P
genes like me logo Genes that share expression patterns with IFIT6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for IFIT6P Gene

Orthologs for IFIT6P Gene

Evolution for IFIT6P Gene

ENSEMBL:
Gene Tree for IFIT6P (if available)
TreeFam:
Gene Tree for IFIT6P (if available)

No data available for Orthologs for IFIT6P Gene

Paralogs for IFIT6P Gene

No data available for Paralogs for IFIT6P Gene

Variants for IFIT6P Gene

Relevant External Links for IFIT6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFIT6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFIT6P Gene

Disorders for IFIT6P Gene

No disorders were found for IFIT6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFIT6P Gene

Publications for IFIT6P Gene

No publications were found for IFIT6P Gene.

Products for IFIT6P Gene

Sources for IFIT6P Gene

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