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Aliases for IFIT6P Gene

Aliases for IFIT6P Gene

  • Interferon Induced Protein With Tetratricopeptide Repeats 6, Pseudogene 2 3 5
  • Interferon-Induced Protein With Tetratricopeptide Repeats 6, Pseudogene 2

External Ids for IFIT6P Gene

Previous GeneCards Identifiers for IFIT6P Gene

  • GC00U930890
  • GC10P090995
  • GC10P084756
  • GC10P091123

Summaries for IFIT6P Gene

GeneCards Summary for IFIT6P Gene

IFIT6P (Interferon Induced Protein With Tetratricopeptide Repeats 6, Pseudogene) is a Pseudogene.

Additional gene information for IFIT6P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFIT6P Gene

Genomics for IFIT6P Gene

GeneHancer (GH) Regulatory Elements for IFIT6P Gene

Promoters and enhancers for IFIT6P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I089363 Enhancer 0.7 ENCODE 550.8 +0.8 835 0.1 PKNOX1 TEAD4 TAL1 CBFA2T3 DPF2 EP300 TCF12 NCOR1 KLF16 HDAC2 IFIT6P IFIT3 IFIT1 ENSG00000232110 IFIT5 LIPA IFIT1B GC10M089235
GH10I089345 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -12.6 -12631 7.9 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A IRF4 YY1 TCF12 FOS ATF7 IFIT5 IFIT3 KIF20B IFIT1B ENSG00000232110 IFIT2 IFIT1 LOC101926887 IFIT6P GC10M089235
GH10I089373 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +12.2 12196 2.4 FOXA2 MLX ZFP64 ARID4B DMAP1 YY1 TCF12 GATA2 RXRA MIER2 IFIT5 IFIT1B GC10M089235 IFIT6P LIPA
GH10I089368 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +7.1 7052 0.9 CTCF ZNF654 RXRA TRIM22 RAD21 NR2F2 SMC3 RUNX3 IFIT5 IFIT1 IFIT3 ENSG00000232110 IFIT2 LIPA IFIT1B IFIT6P GC10M089235
GH10I089342 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -19.1 -19124 1.9 MXI1 ZNF680 USF2 YY1 SP1 POLR2A NFYB CREB1 LOC101926887 IFIT5 IFIT1B IFIT2 ENSG00000232110 IFIT6P GC10M089235 LIPA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IFIT6P on UCSC Golden Path with GeneCards custom track

Genomic Locations for IFIT6P Gene

Genomic Locations for IFIT6P Gene
chr10:89,362,294-89,363,487
(GRCh38/hg38)
Size:
1,194 bases
Orientation:
Plus strand
chr10:91,122,051-91,123,244
(GRCh37/hg19)

Genomic View for IFIT6P Gene

Genes around IFIT6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFIT6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFIT6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFIT6P Gene

Proteins for IFIT6P Gene

Post-translational modifications for IFIT6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFIT6P Gene

Domains & Families for IFIT6P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFIT6P Gene

Function for IFIT6P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFIT6P Gene

Localization for IFIT6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IFIT6P Gene

Pathways & Interactions for IFIT6P Gene

SuperPathways for IFIT6P Gene

No Data Available

Interacting Proteins for IFIT6P Gene

Gene Ontology (GO) - Biological Process for IFIT6P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFIT6P Gene

Drugs & Compounds for IFIT6P Gene

No Compound Related Data Available

Transcripts for IFIT6P Gene

mRNA/cDNA for IFIT6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IFIT6P Gene

No ASD Table

Relevant External Links for IFIT6P Gene

GeneLoc Exon Structure for
IFIT6P
ECgene alternative splicing isoforms for
IFIT6P

Expression for IFIT6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IFIT6P Gene

NURSA nuclear receptor signaling pathways regulating expression of IFIT6P Gene:

IFIT6P
genes like me logo Genes that share expression patterns with IFIT6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IFIT6P Gene

Orthologs for IFIT6P Gene

Evolution for IFIT6P Gene

ENSEMBL:
Gene Tree for IFIT6P (if available)
TreeFam:
Gene Tree for IFIT6P (if available)

No data available for Orthologs for IFIT6P Gene

Paralogs for IFIT6P Gene

No data available for Paralogs for IFIT6P Gene

Variants for IFIT6P Gene

Additional Variant Information for IFIT6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFIT6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFIT6P Gene

Disorders for IFIT6P Gene

No disorders were found for IFIT6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFIT6P Gene

Publications for IFIT6P Gene

No publications were found for IFIT6P Gene.

Products for IFIT6P Gene

Sources for IFIT6P Gene

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