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Aliases for IFI44 Gene

Aliases for IFI44 Gene

  • Interferon-Induced Protein 44 2 3
  • P44 3 4 6
  • TBC/LysM-Associated Domain Containing 5 2 3
  • Microtubule-Associated Protein 44 3 4
  • MTAP44 3 4
  • Interferon-Induced, Hepatitis C-Associated Microtubular Aggregate Protein (44kD) 3
  • TLDC5 3

External Ids for IFI44 Gene

Previous GeneCards Identifiers for IFI44 Gene

  • GC01P079275
  • GC01P078014
  • GC01P078506
  • GC01P078538
  • GC01P078827
  • GC01P078888
  • GC01P079115
  • GC01P077247

Summaries for IFI44 Gene

GeneCards Summary for IFI44 Gene

IFI44 (Interferon-Induced Protein 44) is a Protein Coding gene. Diseases associated with IFI44 include hepatitis c. An important paralog of this gene is IFI44L.

UniProtKB/Swiss-Prot for IFI44 Gene

  • This protein aggregates to form microtubular structures.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFI44 Gene

Genomics for IFI44 Gene

Regulatory Elements for IFI44 Gene

Genomic Location for IFI44 Gene

Start:
78,649,792 bp from pter
End:
78,664,078 bp from pter
Size:
14,287 bases
Orientation:
Plus strand

Genomic View for IFI44 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IFI44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFI44 Gene

Proteins for IFI44 Gene

  • Protein details for IFI44 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TCB0-IFI44_HUMAN
    Recommended name:
    Interferon-induced protein 44
    Protein Accession:
    Q8TCB0
    Secondary Accessions:
    • B7ZAG3
    • D3DQ80
    • Q14496

    Protein attributes for IFI44 Gene

    Size:
    444 amino acids
    Molecular mass:
    50491 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for IFI44 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IFI44 Gene

Proteomics data for IFI44 Gene at MOPED

Post-translational modifications for IFI44 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IFI44 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for IFI44 Gene

Domains for IFI44 Gene

Protein Domains for IFI44 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IFI44 Gene

Graphical View of Domain Structure for InterPro Entry

Q8TCB0

UniProtKB/Swiss-Prot:

IFI44_HUMAN :
  • Q8TCB0
Family:
  • Belongs to the IFI44 family.
genes like me logo Genes that share domains with IFI44: view

No data available for Gene Families for IFI44 Gene

Function for IFI44 Gene

Molecular function for IFI44 Gene

UniProtKB/Swiss-Prot Function: This protein aggregates to form microtubular structures.
UniProtKB/Swiss-Prot Induction: By alpha and beta interferons, but not by gamma interferons.

Phenotypes for IFI44 Gene

genes like me logo Genes that share phenotypes with IFI44: view

Animal Model Products

CRISPR Products

miRNA for IFI44 Gene

miRTarBase miRNAs that target IFI44

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for IFI44

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for IFI44 Gene

Localization for IFI44 Gene

Subcellular locations from UniProtKB/Swiss-Prot for IFI44 Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IFI44 Gene COMPARTMENTS Subcellular localization image for IFI44 gene
Compartment Confidence
cytosol 3
mitochondrion 2

Gene Ontology (GO) - Cellular Components for IFI44 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with IFI44: view

Pathways for IFI44 Gene

SuperPathways for IFI44 Gene

No Data Available

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Interacting Proteins for IFI44 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000359783%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000359783 for IFI44 Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for IFI44 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0009615 response to virus TAS 7925411
genes like me logo Genes that share ontologies with IFI44: view

No data available for Pathways by source for IFI44 Gene

Transcripts for IFI44 Gene

Unigene Clusters for IFI44 Gene

Interferon-induced protein 44:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for IFI44

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for IFI44 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7a · 7b · 7c ^ 8a · 8b ^ 9a · 9b · 9c
SP1: -
SP2: -
SP3: - - - - -
SP4: - -
SP5:
SP6: - - -

Relevant External Links for IFI44 Gene

GeneLoc Exon Structure for
IFI44
ECgene alternative splicing isoforms for
IFI44

Expression for IFI44 Gene

mRNA expression in normal human tissues for IFI44 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for IFI44 Gene

SOURCE GeneReport for Unigene cluster for IFI44 Gene Hs.82316

genes like me logo Genes that share expressions with IFI44: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for IFI44 Gene

Orthologs for IFI44 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IFI44 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IFI44 35
  • 98.72 (n)
  • 97.75 (a)
IFI44 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia IFI44 35
  • 75.91 (n)
  • 61.14 (a)
IFI44 36
  • 59 (a)
OneToOne
dog
(Canis familiaris)
Mammalia IFI44 35
  • 75.15 (n)
  • 59.26 (a)
IFI44 36
  • 58 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ifi44 35
  • 69.76 (n)
  • 57.38 (a)
Ifi44 16
Ifi44 36
  • 56 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ifi44 35
  • 68.65 (n)
  • 55 (a)
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 58 (a)
ManyToMany
-- 36
  • 33 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii CABZ01045230.1 36
  • 26 (a)
ManyToMany
CABZ01073795.1 36
  • 30 (a)
ManyToMany
CR855320.1 36
  • 35 (a)
ManyToMany
si:ch211-197g15.6 35
  • 47.82 (n)
  • 39.33 (a)
si:ch211-208g24.8 36
  • 26 (a)
ManyToMany
si:dkey-79f11.10 36
  • 26 (a)
ManyToMany
si:dkey-79f11.4 36
  • 27 (a)
ManyToMany
si:dkey-79f11.5 36
  • 29 (a)
ManyToMany
si:dkey-79f11.7 36
  • 31 (a)
ManyToMany
si:dkey-79f11.8 36
  • 27 (a)
ManyToMany
si:dkey-79f11.9 36
  • 30 (a)
ManyToMany
si:dkeyp-75b4.9 36
  • 26 (a)
ManyToMany
si:dkeyp-9d4.2 36
  • 28 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 36 (a)
OneToMany
Species with no ortholog for IFI44:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IFI44 Gene

ENSEMBL:
Gene Tree for IFI44 (if available)
TreeFam:
Gene Tree for IFI44 (if available)

Paralogs for IFI44 Gene

Paralogs for IFI44 Gene

Selected SIMAP similar genes for IFI44 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with IFI44: view

Variants for IFI44 Gene

Sequence variations from dbSNP and Humsavar for IFI44 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs10301 -- 78,663,699(-) AGAGG(A/T)ATATT intron-variant
rs192431 -- 78,660,043(-) ACTCT(A/C)TGCTT intron-variant
rs273247 -- 78,661,209(-) tggca(C/T)gtgcc intron-variant
rs273248 -- 78,659,155(-) ATTAT(A/G)CAAGT intron-variant
rs273249 -- 78,658,338(-) TGAAA(C/T)GATAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for IFI44 Gene

Variant ID Type Subtype PubMed ID
nsv871835 CNV Gain 21882294
nsv830315 CNV Gain 17160897
nsv871140 CNV Gain 21882294
esv2677291 CNV Deletion 23128226

Relevant External Links for IFI44 Gene

HapMap Linkage Disequilibrium report
IFI44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IFI44 Gene

Disorders for IFI44 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for IFI44 Gene including...

Search for IFI44 Gene in MalaCards »

(1) University of Copenhagen DISEASES for IFI44 Gene

(1) Novoseek inferred disease relationships for IFI44 Gene

Disease -log(P) Hits PubMed IDs
hepatitis delta 71.8 1

Relevant External Links for IFI44

Genetic Association Database (GAD)
IFI44
Human Genome Epidemiology (HuGE) Navigator
IFI44
genes like me logo Genes that share disorders with IFI44: view

No data available for UniProtKB/Swiss-Prot for IFI44 Gene

Publications for IFI44 Gene

  1. Induction of the human gene for p44, a hepatitis-C-associated microtubular aggregate protein, by interferon-alpha/beta. (PMID: 7925411) Kitamura A. … Kitamura N. (Eur. J. Biochem. 1994) 2 3 4 23
  2. Genetic predisposition of responsiveness to therapy for chronic hepatitis C. (PMID: 16886895) Hwang Y. … Chen D.S. (Pharmacogenomics 2006) 3 23 48
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Polymorphisms of interferons and their receptors in the genetics of severe RSV-associated diseases. (PMID: 18953482) Mailaparambil B. … Heinzmann A. (Arch. Virol. 2008) 3 48
  5. A genome-wide short hairpin RNA screening of jurkat T-cells for human proteins contributing to productive HIV-1 replication. (PMID: 19460752) Yeung M.L. … Jeang K.T. (J. Biol. Chem. 2009) 3

Products for IFI44 Gene

Sources for IFI44 Gene

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