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Aliases for IER5 Gene

Aliases for IER5 Gene

  • Immediate Early Response 5 2 3
  • Immediate Early Response Gene 5 Protein 3
  • SBBI48 3

External Ids for IER5 Gene

Previous GeneCards Identifiers for IER5 Gene

  • GC01P178581
  • GC01P176486
  • GC01P177578
  • GC01P178297
  • GC01P177789
  • GC01P179324
  • GC01P181057
  • GC01P152288

Summaries for IER5 Gene

Entrez Gene Summary for IER5 Gene

  • This gene encodes a protein that is similar to other immediate early response proteins. In the mouse, a similar gene may play an important role in mediating the cellular response to mitogenic signals. Studies in rats found the expression of a similar gene to be increased after waking and sleep deprivation. [provided by RefSeq, Jul 2008]

GeneCards Summary for IER5 Gene

IER5 (Immediate Early Response 5) is a Protein Coding gene. An important paralog of this gene is IER5L.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IER5 Gene

Genomics for IER5 Gene

Genomic Location for IER5 Gene

Start:
181,088,502 bp from pter
End:
181,092,899 bp from pter
Size:
4,398 bases
Orientation:
Plus strand

Genomic View for IER5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IER5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IER5 Gene

Proteins for IER5 Gene

  • Protein details for IER5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VY09-IER5_HUMAN
    Recommended name:
    Immediate early response gene 5 protein
    Protein Accession:
    Q5VY09
    Secondary Accessions:
    • B2RBV3
    • Q8WY68
    • Q9NY49
    • Q9NZP9

    Protein attributes for IER5 Gene

    Size:
    327 amino acids
    Molecular mass:
    33704 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IER5 Gene

Proteomics data for IER5 Gene at MOPED

Post-translational modifications for IER5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IER5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for IER5 Gene

Domains for IER5 Gene

Protein Domains for IER5 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for IER5 Gene

Graphical View of Domain Structure for InterPro Entry

Q5VY09

UniProtKB/Swiss-Prot:

IER5_HUMAN :
  • Q5VY09
Family:
  • Belongs to the IER family.
genes like me logo Genes that share domains with IER5: view

No data available for Gene Families for IER5 Gene

Function for IER5 Gene

miRNA for IER5 Gene

miRTarBase miRNAs that target IER5

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for IER5 Gene

Localization for IER5 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for IER5 Gene COMPARTMENTS Subcellular localization image for IER5 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for IER5 Gene

Pathways for IER5 Gene

SuperPathways for IER5 Gene

No Data Available

Interacting Proteins for IER5 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000356549%0d%0a9606.ENSP00000336591%0d%0a
Selected Interacting proteins: ENSP00000356549 Q5VY09-IER5_HUMAN for IER5 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for IER5 Gene

None

No data available for Pathways by source for IER5 Gene

Transcripts for IER5 Gene

mRNA/cDNA for IER5 Gene

(198) Selected AceView cDNA sequences:
(7) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for IER5 Gene

Immediate early response 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IER5 Gene

No ASD Table

Relevant External Links for IER5 Gene

GeneLoc Exon Structure for
IER5
ECgene alternative splicing isoforms for
IER5

Expression for IER5 Gene

mRNA expression in normal human tissues for IER5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for IER5 Gene

SOURCE GeneReport for Unigene cluster for IER5 Gene Hs.15725

genes like me logo Genes that share expressions with IER5: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for IER5 Gene

Orthologs for IER5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for IER5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IER5 35
  • 98.67 (n)
  • 99.38 (a)
IER5 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia IER5 35
  • 85.51 (n)
  • 77.95 (a)
IER5 36
  • 75 (a)
OneToOne
dog
(Canis familiaris)
Mammalia IER5 36
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ier5 35
  • 81.47 (n)
  • 77.3 (a)
Ier5 16
Ier5 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia IER5 36
  • 54 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ier5 35
  • 80.15 (n)
  • 75.33 (a)
chicken
(Gallus gallus)
Aves IER5 35
  • 64.14 (n)
  • 59.6 (a)
IER5 36
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.7086 35
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9060 35
zebrafish
(Danio rerio)
Actinopterygii ier5 35
  • 48.87 (n)
  • 43.61 (a)
ier5 36
  • 39 (a)
OneToOne
wufb04b03 35
Species with no ortholog for IER5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for IER5 Gene

ENSEMBL:
Gene Tree for IER5 (if available)
TreeFam:
Gene Tree for IER5 (if available)

Paralogs for IER5 Gene

Paralogs for IER5 Gene

genes like me logo Genes that share paralogs with IER5: view

Variants for IER5 Gene

Sequence variations from dbSNP and Humsavar for IER5 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1045078 -- 181,090,680(+) GAAAG(A/C)CCTTA utr-variant-3-prime
rs1361365 - 181,089,507(+) GCCGC(A/G)ACCAG reference, missense
rs1416829 - 181,089,482(+) CCCCC(C/G)GCGCT reference, missense
rs3747951 - 181,089,755(-) CCCGG(A/G)GCTTT reference, missense
rs3747952 -- 181,089,536(-) CGCGG(A/G)CGGCG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for IER5 Gene

Variant ID Type Subtype PubMed ID
esv22385 CNV Loss 19812545

Relevant External Links for IER5 Gene

HapMap Linkage Disequilibrium report
IER5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IER5 Gene

Disorders for IER5 Gene

(1) University of Copenhagen DISEASES for IER5 Gene

Relevant External Links for IER5

Genetic Association Database (GAD)
IER5
genes like me logo Genes that share disorders with IER5: view

No data available for UniProtKB/Swiss-Prot for IER5 Gene

Publications for IER5 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Large-scale cDNA transfection screening for genes related to cancer development and progression. (PMID: 15498874) Wan D. … Gu J. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  3. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  4. Ier5, a novel member of the slow-kinetics immediate-early genes. (PMID: 10049588) Williams M. … Hunter K. (Genomics 1999) 2 3
  5. Gene expression in the brain across the sleep-waking cycle. (PMID: 11102586) Cirelli C. … Tononi G. (Brain Res. 2000) 2 3

Products for IER5 Gene

Sources for IER5 Gene

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