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Aliases for IDNK Gene

Aliases for IDNK Gene

  • IdnK, Gluconokinase Homolog (E. Coli) 2 3
  • C9orf103 3 4 6
  • Gluconate Kinase 3 4
  • Chromosome 9 Open Reading Frame 103 2
  • Gluconokinase-Like Protein 3
  • Glucokinase-Like Protein 3
  • Probable Gluconokinase 3
  • EC 2.7.1.12 4
  • BA522I20.2 3

External Ids for IDNK Gene

Previous Symbols for IDNK Gene

  • C9orf103

Summaries for IDNK Gene

GeneCards Summary for IDNK Gene

IDNK (IdnK, Gluconokinase Homolog (E. Coli)) is a Protein Coding gene. GO annotations related to this gene include gluconokinase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IDNK Gene

Genomics for IDNK Gene

Genomic Location for IDNK Gene

Start:
83,623,049 bp from pter
End:
83,644,130 bp from pter
Size:
21,082 bases
Orientation:
Plus strand

Genomic View for IDNK Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for IDNK Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IDNK Gene

No data available for Regulatory Elements for IDNK Gene

Proteins for IDNK Gene

  • Protein details for IDNK Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T6J7-GNTK_HUMAN
    Recommended name:
    Probable gluconokinase
    Protein Accession:
    Q5T6J7
    Secondary Accessions:
    • A5PLN6
    • Q5T6J6

    Protein attributes for IDNK Gene

    Size:
    187 amino acids
    Molecular mass:
    20578 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for IDNK Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IDNK Gene

Proteomics data for IDNK Gene at MOPED

Post-translational modifications for IDNK Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for IDNK Gene

No data available for DME Specific Peptides for IDNK Gene

Domains for IDNK Gene

Protein Domains for IDNK Gene

UniProtKB/Swiss-Prot:

GNTK_HUMAN
Family:
  • Belongs to the gluconokinase GntK/GntV family.:
    • Q5T6J7
genes like me logo Genes that share domains with IDNK: view

No data available for Gene Families for IDNK Gene

Function for IDNK Gene

Molecular function for IDNK Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + D-gluconate = ADP + 6-phospho-D-gluconate

Enzyme Numbers (IUBMB) for IDNK Gene

Gene Ontology (GO) - Molecular Function for IDNK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0005524 ATP binding IEA --
GO:0016301 kinase activity --
GO:0046316 gluconokinase activity IEA --
genes like me logo Genes that share ontologies with IDNK: view
genes like me logo Genes that share phenotypes with IDNK: view

Animal Models for IDNK Gene

MGI Knock Outs for IDNK:

miRNA for IDNK Gene

miRTarBase miRNAs that target IDNK

No data available for Transcription Factor Targeting and HOMER Transcription for IDNK Gene

Localization for IDNK Gene

No data available for Gene Ontology (GO) - Cellular Components for IDNK Gene

Pathways for IDNK Gene

SuperPathways for IDNK Gene

No Data Available

UniProtKB/Swiss-Prot Q5T6J7-GNTK_HUMAN

  • Pathway: Carbohydrate acid metabolism; D-gluconate degradation

Interacting Proteins for IDNK Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000365601%0d%0a9606.ENSP00000300026%0d%0a9606.ENSP00000303057%0d%0a
Selected Interacting proteins: ENSP00000365601 for IDNK Gene via STRING

Gene Ontology (GO) - Biological Process for IDNK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005975 carbohydrate metabolic process --
GO:0008150 biological_process ND --
GO:0016310 phosphorylation IEA --
GO:0046177 D-gluconate catabolic process IEA --
genes like me logo Genes that share ontologies with IDNK: view

No data available for Pathways by source for IDNK Gene

Transcripts for IDNK Gene

Unigene Clusters for IDNK Gene

IdnK, gluconokinase homolog (E. coli):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for IDNK Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b
SP1:
SP2: -

Relevant External Links for IDNK Gene

GeneLoc Exon Structure for
IDNK
ECgene alternative splicing isoforms for
IDNK

Expression for IDNK Gene

mRNA expression in normal human tissues for IDNK Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for IDNK Gene

SOURCE GeneReport for Unigene cluster for IDNK Gene Hs.530261

genes like me logo Genes that share expressions with IDNK: view

Orthologs for IDNK Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for IDNK Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia IDNK 36
  • 97.3 (n)
  • 95.95 (a)
IDNK 37
  • 71 (a)
OneToOne
cow
(Bos Taurus)
Mammalia IDNK 37
  • 80 (a)
OneToOne
LOC100297815 36
  • 87.03 (n)
  • 80 (a)
dog
(Canis familiaris)
Mammalia IDNK 36
  • 88.29 (n)
  • 84.86 (a)
IDNK 37
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Idnk 36
  • 80.07 (n)
  • 75.54 (a)
Idnk 16
Idnk 37
  • 76 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia IDNK 37
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia IDNK 37
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Idnk 36
  • 78.92 (n)
  • 75.14 (a)
chicken
(Gallus gallus)
Aves CZH9ORF103 36
  • 66.28 (n)
  • 59.88 (a)
IDNK 37
  • 52 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia IDNK 37
  • 54 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia idnk 36
  • 61.79 (n)
  • 58.48 (a)
worm
(Caenorhabditis elegans)
Secernentea F26D11.1 36
  • 49.01 (n)
  • 45.83 (a)
F26D11.1 37
  • 43 (a)
OneToOne
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ADR164C 36
  • 49.2 (n)
  • 44.83 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 37
  • 30 (a)
OneToOne
-- 39
YDR248C 36
  • 50.47 (n)
  • 41.55 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0D12078g 36
  • 46.46 (n)
  • 37.58 (a)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT2G16790 36
  • 56.09 (n)
  • 46.71 (a)
rice
(Oryza sativa)
Liliopsida Os06g0114650 36
  • 49.21 (n)
  • 45.71 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU02702 36
  • 48.95 (n)
  • 41.77 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC4G9.12 36
  • 45.56 (n)
  • 41.33 (a)
Species with no ortholog for IDNK:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for IDNK Gene

ENSEMBL:
Gene Tree for IDNK (if available)
TreeFam:
Gene Tree for IDNK (if available)

Paralogs for IDNK Gene

genes like me logo Genes that share paralogs with IDNK: view

No data available for Paralogs for IDNK Gene

Variants for IDNK Gene

Sequence variations from dbSNP and Humsavar for IDNK Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs1052690 - 83,643,770(+) CCTAA(A/C)AATGA reference, missense, nc-transcript-variant
rs1056086 -- 83,627,687(+) CATGT(A/C)CTTTA intron-variant
rs1413293 -- 83,639,639(-) ATCCA(A/G)TTTTG intron-variant
rs1572135 -- 83,642,979(+) TAGAA(C/T)GCAGA intron-variant, downstream-variant-500B
rs2282220 -- 83,627,468(+) GAAAA(C/G)TGAGG intron-variant

Relevant External Links for IDNK Gene

HapMap Linkage Disequilibrium report
IDNK

No data available for Structural Variations from Database of Genomic Variants (DGV) for IDNK Gene

Disorders for IDNK Gene

No disorders were found for IDNK Gene.

No data available for UniProtKB/Swiss-Prot for IDNK Gene

Publications for IDNK Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3
  3. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3
  4. Inferring the metabolism of human orphan metabolites from their metabolic network context affirms human gluconokinase activity. (PMID: 23067238) Rolfsson A.9. … Thiele I. (Biochem. J. 2013) 3
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4

Products for IDNK Gene

Sources for IDNK Gene

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