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Aliases & Descriptions for ID2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| GIG8 1, 2 | | ID2A 2 | | ID2H 2 | | MGC26389 2 | | OTTHUMP00000140258 2 | | bHLHb26 1, 2 |
| | | Descriptions |
|---|
| DNA-binding protein inhibitor ID2 2 | | Inhibitor of DNA binding 2 2, 3 | | cell growth-inhibiting gene 8 2 | | helix-loop-helix protein ID2 2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 2 | | inhibitor of differentiation 2 2 |
|
| | Search outside databases for aliases for ID2 genePrevious GC identifers: GC02P008605 GC02P008873 GC02P008843 |
Summaries for ID2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ID2: The protein encoded by this gene belongs to the inhibitor of DNA binding (ID) family, members of which are transcriptional regulators that contain a helix-loop-helix (HLH) domain but not a basic domain. Members of the ID family inhibit the functions of basic helix-loop-helix transcription factors in a dominant-negative manner by suppressing their heterodimerization partners through the HLH domains. This protein may play a role in negatively regulating cell differentiation. A pseudogene has been identified for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: ID2_HUMAN, Q02363Function: ID (inhibitor of DNA binding) HLH proteins lack a basic DNA-binding domain but are able to form heterodimers with other HLH proteins, thereby inhibiting DNA binding. ID-2 may be an inhibitor of tissue-specific gene expressionGene Wiki entry for ID2 |
Genomic Location for ID2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ID2 gene 
Entrez Gene cytogenetic band: 2p25 Ensembl cytogenetic band: 2p25.1 HGNC cytogenetic band: 2p25ID2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02P008772:
(about GC identifiers)
Start:
|
8,736,426 bp from pter |
End:
|
8,742,034 bp from pter |
Size:
|
5,609 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000002.10 NT_005334.15
| Proteins for ID2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ID2_HUMAN, Q02363 (See
protein sequence)Recommended Name: DNA-binding protein inhibitor ID-2 Size: 134 amino acids; 14917 Da
Subunit: Heterodimer with other HLH proteins
Subcellular location: Nucleus
Developmental stage: Found in most early fetal tissues but not in the corresponding mature tissuesPost-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002157.2
ENSEMBL proteins: ENSP00000234091 ENSP00000385465 ENSP00000379585
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: ID2 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ID2: Assays for ID2: | Protein
Domains/ Families for ID2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q02363
ProtoNet protein and cluster: Q02363 1 Blocks protein family: IPB001092 Basic helix-loop-helix dimerization domain bHLH
UniProtKB/Swiss-Prot: ID2_HUMAN, Q02363Similarity: Contains 1 basic helix-loop-helix (bHLH) domain | Gene Function for ID2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002166
Applied Biosystems Silencer® siRNAs for ID2
Sigma-Aldrich siRNA for ID2  Sigma-Aldrich shRNA for ID2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002166                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002166                                  untagged cDNA clone in CMV expression vector: NM_002166 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002166
UniProtKB/Swiss-Prot: ID2_HUMAN, Q02363Function: ID (inhibitor of DNA binding) HLH proteins lack a basic DNA-binding domain but are able to form heterodimers with other HLH proteins, thereby inhibiting DNA binding. ID-2 may be an inhibitor of tissue-specific gene expressionGenatlas biochemistry entry for ID2:inhibitor of DNA binding 2,putative transcription regulator,expressed during early development,inhibiting transcription factors of the basic helix loop helix family15 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Id2):
2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ID2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for ID2 
5/48 Interacting proteins for ID2 (Q023631, 2 ENSP000002340913) via UniProtKB, MINT, and/or STRING (see all 48
)About this table
5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0000122 | negative regulation of transcription from RNA polymerase II promoter |
IEA | -- | | GO:0007275 | multicellular organismal development |
TAS | 1741406 | | GO:0007507 | heart development |
IEA | -- | | GO:0016481 | negative regulation of transcription |
IDA | 14627819 | | GO:0043353 | enucleate erythrocyte differentiation |
IEA | -- | About this table
|
Drugs & Compounds for ID2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ID2 2 Novoseek chemical compound relationships for ID2 gene
About this table
|
Transcripts for ID2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002166
Sigma-Aldrich siRNA for ID2  Sigma-Aldrich shRNA for ID2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002166 REFSEQ mRNAs for ID2 gene: NM_002166.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002166               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002166                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002166                                  untagged cDNA clone in CMV expression vector: NM_002166  Additional cDNA sequence: AK222682.1 AK311988.1 AY634687.1 BC030639.2 CR607131.1 CR611001.1 CR614653.1 CR620423.1 CR620531.1 CR623038.1 CR626410.1 D13891.1 M97796.1 18 DOTS entries: DT.102824856 DT.92437989 DT.100818571 DT.100818572 DT.100818580 DT.100818582 DT.419995 DT.100722779 DT.95334744 DT.100818570 DT.92437995 DT.100697819 DT.100818576 DT.102843630 DT.120992816 DT.120992827 DT.92437991 DT.91990899 24/483 AceView cDNA sequences (see all 483
):BM829735 CB107753 CR623038 BU742430 AI281085 AW188309 CA436687 BU521193 BI762181 AA465647 BM791073 BI835845 AL541358 BM126985 AA055233 AI129437 N46821 BI962513 BM504599 BM762109 AI473299 AI076720 AA872392 BM476729
highest scoring ESTs for ID2:D13891 AA151620 AA524819 AA526652 AA557557 AA594299 AA625292 AA946931 AI076720 AI087021 Unigene Cluster for ID2: Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein Hs.180919 [show with all ESTs]Unigene Representative Sequence: CR623038
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000234091
ENST00000331129
ENST00000396290
|
Expression for ID2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ID2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ID2
1 / 2 / 3 7 probe-sets matching ID2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TCTGAAGTCA
SOURCE GeneReport for Unigene cluster: Hs.180919
Expression variation in blood from EXPOLDB for ID2 UniProtKB/Swiss-Prot: ID2_HUMAN, Q02363Tissue specificity: Highly expressed in early fetal tissues, including those of the central nervous system |
Orthologs for ID2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ID2 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for ID2
ENSEMBL Gene Tree for ID2 | Paralogs for ID2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ID2 gene
- ID12 ID32 ID42
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for ID2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ID2 (up to first 250kb)
|
Disorders & Mutations for ID2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 600386
10/15 Novoseek disease relationships for ID2 gene (see all 15
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| retinoblastoma |
56.16 |
12 |
11034201 (2), 15831462 (1), 16733829 (1), 16549780 (1) (see all 9) |
| ewings sarcoma |
43.86 |
10 |
16869242 (7), 12527902 (3) |
| tumors |
36.59 |
38 |
12545167 (3), 16549780 (3), 12447693 (2), 18085637 (2) (see all 22) |
| lymphoma |
12.84 |
7 |
15492249 (2), 18085637 (1), 8632670 (1) |
| cancer |
10.15 |
7 |
12447693 (1), 16733829 (1), 9731481 (1), 18413820 (1) (see all 6) |
| colon carcinoma |
5.41 |
5 |
11572874 (2), 16007183 (1) |
| glioma |
1.03 |
2 |
7622574 (1), 12007145 (1) |
| primary tumor |
0.00 |
1 |
12447693 (1) |
| hypertrophy |
0.00 |
2 |
16002773 (1), 15601750 (1) |
| breast cancer |
0.00 |
1 |
15489884 (1) |
About this table
|
Medical News for ID2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ID2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/186 PubMed articles for ID2 gene (see all 186
):- Id-related genes encoding helix-loop-helix proteins are required for G1 progression and are repressed in senescent human fibroblasts. (PubMed id 8294468)2, 3, 4 Hara E....Oda K. (1994)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- A human Id-like helix-loop-helix protein expressed during early development. (PubMed id 1741406)3, 4 Biggs J.... Israel M.A. (1992)
- Id2 promotes the invasive growth of MCF-7 and SKOV-3 cells by a novel mechanism independent of dimerization to basic helix-loop-helix factors. (PubMed id 19257909)1, 3 Meng Y....Han W. (2009)
- Regulation of Id2 expression in EL4 T lymphoma cells overexpressing growth hormone. (PubMed id 19010462)1, 3 Weigent D.A. (2009)
- The helix-loop-helix protein Id2 is expressed differentially and induced by myc in T-cell lymphomas. (PubMed id 18085637)1, 3 Cotta C.V....Rassidakis G.Z. (2008)
- The protein ENH is a cytoplasmic sequestration factor for Id2 in normal and tumor cells from the nervous system. (PubMed id 16549780)1, 3 Lasorella A. and Iavarone A. (2006)
- Induction of ID2 expression by hypoxia-inducible factor-1: a role in dedifferentiation of hypoxic neuroblastoma cells. (PubMed id 15252039)1, 3 Lofstedt T....Axelson H. (2004)
- The Id2 gene is a novel target of transcriptional activation by EWS-ETS fusion proteins in Ewing family tumors. (PubMed id 12447693)1, 3 Nishimori H....Tokino T. (2002)
- Id2 specifically alters regulation of the cell cycle by tumor suppressor proteins. (PubMed id 8649364)1, 3 Lasorella A....Israel M.A. (1996)
|
Search for ID2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ID2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ID2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ID2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ID2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ID2:

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