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Aliases & Descriptions for ICMT
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.1.1.100 3 | | HSTE14 1, 2 | | MGC39955 2 | | MST098 2 | | MSTP098 2 | | OTTHUMP00000001381 2 | | PCCMT 1, 2, 3 | | PCMT 2 | | PPMT 1, 2, 3 | | pcCMT 3 |
| | | Descriptions |
|---|
| Isoprenylcysteine carboxylmethyltransferase 3 | | Prenylated protein carboxyl methyltransferase 2, 3 | | Prenylcysteine carboxyl methyltransferase 2, 3 | | isoprenylcysteine carboxyl methyltransferase 2 | | protein-S isoprenylcysteine O-methyltransferase 2 |
|
| | Search outside databases for aliases for ICMT genePrevious GC identifers: GC01M005857 GC01M006090 GC01M005990 |
Summaries for ICMT(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ICMT: This gene encodes the third of three enzymes that posttranslationally modify isoprenylated C-terminal cysteine residues in certain proteins and target those proteins to the cell membrane. This enzyme localizes to the endoplasmic reticulum. Alternative splicing may result in other transcript variants, but the biological validity of those transcripts has not been determined. [provided by RefSeq] UniProtKB/Swiss-Prot: ICMT_HUMAN, O60725Function: Catalyzes the post-translational methylation of isoprenylated C-terminal cysteine residuesGene Wiki entry for ICMT |
Genomic Location for ICMT
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ICMT gene 
Entrez Gene cytogenetic band: 1p36.21 Ensembl cytogenetic band: 1p36.31 HGNC cytogenetic band: 1p36ICMT Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01M006215:
(about GC identifiers)
Start:
|
6,203,840 bp from pter |
End:
|
6,218,631 bp from pter |
Size:
|
14,792 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000001.9 NT_021937.18
| Proteins for ICMT
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ICMT_HUMAN, O60725 (See
protein sequence)Recommended Name: Protein-S-isoprenylcysteine O-methyltransferase Size: 284 amino acids; 31938 Da
Cofactor: Divalent cations. Probably zinc (By similarity)
Subcellular location: Endoplasmic reticulum membrane; Multi-pass membrane proteinREFSEQ proteins: NP_036537.1
ENSEMBL proteins: ENSP00000354894 ENSP00000343552
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ICMT: Assays for ICMT: | Protein
Domains/ Families for ICMT(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry O60725
ProtoNet protein and cluster: O60725 2 Blocks protein families: IPB007269 Isoprenylcysteine carboxyl methyltransferase IPB011024 Gamma-crystallin related
UniProtKB/Swiss-Prot: ICMT_HUMAN, O60725Similarity: Belongs to the isoprenylcysteine O-methyltransferase family | Gene Function for ICMT
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_012405
Applied Biosystems Silencer® siRNAs for ICMT
Sigma-Aldrich siRNA for ICMT  Sigma-Aldrich shRNA for ICMT  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_012405                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_012405                                  untagged cDNA clone in CMV expression vector: NM_012405 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_012405
UniProtKB/Swiss-Prot: ICMT_HUMAN, O60725Function: Catalyzes the post-translational methylation of isoprenylated C-terminal cysteine residuesCatalytic activity: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl esterEnzyme Number (IUBMB): EC 2.1.1.100 8 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Icmt):
4 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004671 | protein-S-isoprenylcysteine O-methyltransferase activity |
IEA | -- | | GO:0008140 | cAMP response element binding protein binding |
IEA | -- | | GO:0008168 | methyltransferase activity |
IEA | -- | | GO:0016740 | transferase activity |
IEA | -- | About this table | Pathways & Interactions for ICMT
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for ICMT (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for ICMT 
--5/9 Gene Ontology (GO) biological process terms (links to tree view) (see all 9
): About this table
|
Drugs & Compounds for ICMT(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ICMT 5 Novoseek chemical compound relationships for ICMT gene
About this table
|
Transcripts for ICMT(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_012405
Sigma-Aldrich siRNA for ICMT  Sigma-Aldrich shRNA for ICMT  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_012405 REFSEQ mRNAs for ICMT gene: NM_012405.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_012405               OriGene GFP tagged cDNA clone in CMV expression vector: NM_012405                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_012405                                  untagged cDNA clone in CMV expression vector: NM_012405  Additional cDNA sequence: AF173157.1 BC028168.1 CR541671.1 CR541711.1 CR595162.1 CR605804.1 16 DOTS entries: DT.100790533 DT.87017640 DT.100790540 DT.86855797 DT.95345873 DT.100790531 DT.95343582 DT.100790535 DT.121366499 DT.91771617 DT.40109201 DT.40109202 DT.86840009 DT.100029749 DT.91749368 DT.95283915 24/374 AceView cDNA sequences (see all 374
):CB048275 AW779430 AA984028 BU617580 AI304898 W78108 CR541711 AI222981 AL553748 AW169707 AW612700 BF001263 CA390765 CA429871 BU955941 BU617626 CB160354 NM_170705 BM771396 AI244487 BQ045349 BM709703 BE740204 BU839281
highest scoring ESTs for ICMT:AL513958 BC028168 BI464077 BI919113 BM546276 BM564792 BP429984 BU160832 BU501528 CA390765 Unigene Cluster for ICMT: Isoprenylcysteine carboxyl methyltransferase Hs.515688 [show with all ESTs]Unigene Representative Sequence: NM_012405
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for ICMT
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7a | · | 7b | · | 7c | · | 7d | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for ICMT
2 Ensembl transcripts including schematic representations: ENST00000362035
ENST00000343813
|
Expression for ICMT
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ICMT expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ICMT
1 / 2 / 3 7 probe-sets matching ICMT gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGTTTGGAAG
SOURCE GeneReport for Unigene cluster: Hs.515688
Expression variation in blood from EXPOLDB for ICMT UniProtKB/Swiss-Prot: ICMT_HUMAN, O60725Tissue specificity: Ubiquitously expressed. Expressed at higher levels in the cerebellum and putamen than in other brain regions. Abundant expression seen in the Purkinje cells and pontine neurons |
Orthologs for ICMT
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ICMT gene from 5/19 species (see all 19
)
About this table Species with no ortholog for ICMT
ENSEMBL Gene Tree for ICMT | Paralogs for ICMT(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for ICMT(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ICMT (up to first 250kb)
|
Disorders & Mutations for ICMT
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 605851
4 Novoseek disease relationships for ICMT gene
About this table
Human Genome Epidemiology Navigator: ICMT (1 document)
|
Medical News for ICMT(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ICMT (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/60 PubMed articles for ICMT gene (see all 60
):- Mammalian prenylcysteine carboxyl methyltransferase is in the endoplasmic reticulum. (PubMed id 9614111)1, 2, 3, 4 Dai Q.... Philips M.R. (1998)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Polyglutamine expansion down-regulates specific neuronal genes before pathologic changes in SCA1. (PubMed id 10649571)3, 4 Lin X.... Zoghbi H.Y. (2000)
- The carboxyl methyltransferase modifying G proteins is a metalloenzyme. (PubMed id 10441503)2, 3 Desrosiers R.R....Beliveau R. (1999)
- Inhibition of ICMT induces endothelial cell apoptosis through GRP94. (PubMed id 17347446)1, 3 Lu Q....Rounds S. (2007)
- Isoprenylcysteine carboxyl methyltransferase activity modulates endothelial cell apoptosis. (PubMed id 12631708)1, 3 Kramer K....Rounds S. (2003)
- Targeting Ras signaling through inhibition of carboxyl methylation: an unexpected property of methotrexate. (PubMed id 12750467)1, 3 Winter-Vann A.M....Casey P.J. (2003)
- Topology of mammalian isoprenylcysteine carboxyl methyltransferase determined in live cells with a fluorescent probe. (PubMed id 19158273)1, 3 Wright L.P....Philips M.R. (2009)
- Role of isoprenylcysteine carboxyl methyltransferase in tumor necrosis factor-alpha stimulation of expression of vascular cell adhesion molecule-1 in endothelial cells. (PubMed id 12006387)1, 3 Ahmad M....Alexander R.W. (2002)
- Prenylcysteine carboxymethyltransferase type III activity is decreased in retinoic acid-treated SH-SY5Y neuroblastoma cells. (PubMed id 11906819)1, 3 Van Dessel G.A....Lagrou A.R. (2002)
|
Search for ICMT
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ICMT
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ICMT
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ICMT(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ICMT(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ICMT:

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