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Aliases & Descriptions for ICK
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.11.22 3 ECO 2 , 5 KIAA0936 1 , 2 , 3 , 5 LCK2 1 , 2 , 3 MGC46090 1 , 2 MRK 1 , 2 , 3 , 5 OTTHUMP00000016630 2 OTTHUMP00000039961 2 hICK 3
Descriptions Intestinal cell kinase 2 , 3 Laryngeal cancer kinase 2 3 MAK-related kinase 2 , 3 intestinal cell (MAK-like) kinase 2 serine/threonine protein kinase 2
Search outside databases for aliases for ICK genePrevious GC identifers: GC06M052868 GC06M052912
Summaries for ICK (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ICK : Eukaryotic protein kinases are enzymes that belong to a very extensive family of proteins whichshare a conserved catalytic core common with both serine/threonine and tyrosine protein kinases.This gene encodes an intestinal serine/threonine kinase harboring a dual phosphorylation sitefound in mitogen-activating protein (MAP) kinases. The protein localizes to the intestinal cryptregion and is thought to be important in intestinal epithelial cell proliferation anddifferentiation. Alternative splicing has been observed at this locus and two variants, encodingthe same isoform, have been identified. [provided by RefSeq] UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 Function : May play a key role in the development of multiple organ systems and particularly incardiac development (By similarity)
Gene Wiki entry for ICK
Genomic Location for ICK
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ICK gene Entrez Gene cytogenetic band: 6p12.1 Ensembl cytogenetic band: 6p12.1 HGNC cytogenetic band: 6p12.3-p11.2 ICK Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure
GeneLoc location for GC06M052974:
(about GC identifiers )
Start:
52,974,057 bp from pter
End:
53,034,559 bp from pter
Size:
60,503 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000006.10 NT_007592.14 Proteins for ICK
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 (See
protein sequence )Recommended Name: Serine/threonine-protein kinase ICK Size : 632 amino acids; 71427 Da
Cofactor : Magnesium
Subcellular location : Nucleus. Cytoplasm, cytosol (By similarity). Note=Nuclear localization hasbeen observed with a GFP-tagged construct in transfected HeLa cells (PubMed:12103360). Cytosoliclocalization was shown in rat embryonic cardiomyocytes by immunostaining (PubMed:8570168)
Secondary accessions : O75985 Q5THL2 Q8IYH8 Q9BX17 Q9NYX3Alternative splicing : 2 isoforms : Q9UPZ9-1 Q9UPZ9-2
Post-translational modifications:
Autophosphorylated on serine and threonine residues. May play a role in enzyme activation1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_055735.1 NP_057597.2 ENSEMBL proteins: ENSP00000263043 ENSP00000349458 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ICK: Assays for ICK:
Protein
Domains/ Families for ICK(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UPZ9 ProtoNet protein and cluster: Q9UPZ9
UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 Similarity : Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family.CDC2/CDKX subfamily Similarity : Contains 1 protein kinase domain
Gene Function for ICK
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_173041 Applied Biosystems Silencer ® siRNAs for ICK Sigma-Aldrich siRNA and siRNA Panels for ICK Sigma-Aldrich shRNA Panels and shRNA for ICK Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_014920                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_014920                                  untagged cDNA clones in CMV expression vector (see all 4 ): BC035807  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_016513 UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 Function : May play a key role in the development of multiple organ systems and particularly incardiac development (By similarity) Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme Number (IUBMB): EC 2.7.11.22
1 MGI phenotypic allele for Ick (no phenotypes)5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ICK
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Interacting protein for ICK (Q9UPZ9 2 ) via UniProtKB, MINT, and/or STRING About this table 4 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for ICK (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Transcripts for ICK(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_173041 Sigma-Aldrich siRNA and siRNA Panels for ICK Sigma-Aldrich shRNA Panels and shRNA for ICK Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_014920 NM_016513
REFSEQ mRNAs for ICK gene (2 alternative transcripts): NM_014920.3 NM_016513.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_014920 NM_016513
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_014920                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_014920                                  untagged cDNA clones in CMV expression vector (see all 4 ): BC035807  
Additional cDNA sequence: AB023153.1 AF152469.1 AF225919.1 AJ420557.1 AK074892.1 BC035807.1 BC136420.1 BC136421.1 BC152464.1 BX647493.1 CR608568.1
8 DOTS entries : DT.95372370 DT.115329 DT.100663013 DT.100018316 DT.40195675 DT.100805092 DT.92426700 DT.92426701
24/127 AceView cDNA sequences (see all 127
):Z42402 BU186351 AK074892 AA766751 BG681441 AA428138 AA733178 CD245100 AW872989 AA993852 AL600198 CR608568 AB023153 NM_016513 AA908456 AI468694 BF514365 AA736840 AA452290 AI796746 BQ022166 BM128705 Z38609 AA428139
highest scoring ESTs for ICK :AB023153 AA908197 AF152469 AK074892 BX490894 AA045951 AA047491 AA428139 AA452290 AA628396
Unigene Cluster for ICK: Intestinal cell (MAK-like) kinase Hs.417022 [show with all ESTs ] Unigene Representative Sequence: NM_016513 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for ICK (see all 6
) ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16a · 16b · 16c · 16d SP1 :   -       -               -         -     -             SP2 :   -   -     -               -         -     -             SP3 :         -                                       SP4 :                                   -             SP5 :   -   -                                          
About this scheme ECgene alternative splicing isoforms for ICK 2 Ensembl transcripts including schematic representations : ENST00000350082
ENST00000356971
Expression for ICK
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ICK expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ICK 1 / 2 / 3
4 probe-sets matching ICK gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.417022 Expression variation in blood from EXPOLDB for ICK
UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 Tissue specificity : Expressed in heart, brain, placenta, pancreas, thymus, prostate, testis, ovary,small intestine and colon, with highest levels in placenta and testis. Not detected in spleen.Also expressed in many cancer cell lines
Orthologs for ICK
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ICK gene from 5/11 species (see all 11
)
About this table Species with no ortholog for ICK ENSEMBL Gene Tree for ICK Paralogs for ICK (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ICK gene MAK 2
SNPs/Variants for ICK (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ICK (up to first 250kb)
Disorders & Mutations for ICK
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 612325 disorders : 612651 UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9
Defects in ICK are the cause of endocrine-cerebroosteodysplasia (ECO) [MIM:612651]. ECO isa previously unidentified neonatal lethal recessive disorder with multiple anomalies involving theendocrine, cerebral, and skeletal systems
Human Gene Mutation Database : ICK Human Genome Epidemiology Navigator: ICK (1 document)
Medical News for ICK (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ICK (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/16 PubMed articles for ICK gene (see all 16
): The identification and subcellular localization of human MRK. (PubMed id 12103360) 2, 3, 4 Yang T....Chen J. (2002) Intestinal cell kinase (ICK) localizes to the crypt region and requires a dual phosphorylation site found in map kinases. (PubMed id 10699974) 1, 3, 4 Togawa K.... Rustgi A.K. (2000) A multiplex human syndrome implicates a key role for intestinal cell kinase in development of central nervous, skeletal, and endocrine systems. (PubMed id 19185282) 1, 3, 4 Lahiry P....Hegele R.A. (2009) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404) 3, 4 Mungall A.J.... Beck S. (2003) Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10231032) 3, 4 Nagase T....Ohara O. (1999) Coeliac disease associated risk variants in TNFAIP3 and REL implicate altered NF-{kappa}B signalling. (PubMed id 19240061) 3 Trynka G....Wijmenga C. (2009) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 3 Barbe L....Andersson-Svahn H. (2008) Patterns of somatic mutation in human cancer genomes. (PubMed id 17344846) 4 Greenman C.... Stratton M.R. (2007) Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer. (PubMed id 18083107) 4 Rikova K....Comb M.J. (2007)
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Genome Databases showing ICK
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ICK
(According to HUGE )
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Specialized Databases showing ICK (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ICK (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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