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ICK Gene

protein-coding   GIFtS: 59

GC06M052974
intestinal cell (MAK-like) kinase
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
EC 2.7.11.22 3
ECO 2, 5
KIAA0936 1, 2, 3, 5
LCK2 1, 2, 3
MGC46090 1, 2
MRK 1, 2, 3, 5
OTTHUMP00000016630 2
OTTHUMP00000039961 2
hICK 3
Descriptions
Intestinal cell kinase 2, 3
Laryngeal cancer kinase 2 3
MAK-related kinase 2, 3
intestinal cell (MAK-like) kinase 2
serine/threonine protein kinase 2
External Ids
HGNC: 212191
Entrez Gene: 228582
UniProtKB: Q9UPZ93
Ensembl: ENSG000001121447
Search outside databases for aliases for ICK gene

Previous GC identifers: GC06M052868 GC06M052912

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ICK:
Eukaryotic protein kinases are enzymes that belong to a very extensive family of proteins which
share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases.
This gene encodes an intestinal serine/threonine kinase harboring a dual phosphorylation site
found in mitogen-activating protein (MAP) kinases. The protein localizes to the intestinal crypt
region and is thought to be important in intestinal epithelial cell proliferation and
differentiation. Alternative splicing has been observed at this locus and two variants, encoding
the same isoform, have been identified. [provided by RefSeq]

UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9
Function: May play a key role in the development of multiple organ systems and particularly in
cardiac development (By similarity)

Gene Wiki entry for ICK

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ICK gene  

Entrez Gene cytogenetic band: 6p12.1   Ensembl cytogenetic band:  6p12.1   HGNC cytogenetic band: 6p12.3-p11.2

ICK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M052974:     (about GC identifiers)

Start:
52,974,057 bp from pter
End:
53,034,559 bp from pter
Size:
60,503 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000006.10  NT_007592.14  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9 (See protein sequence)
Recommended Name: Serine/threonine-protein kinase ICK  
Size: 632 amino acids; 71427 Da
Cofactor: Magnesium
Subcellular location: Nucleus. Cytoplasm, cytosol (By similarity). Note=Nuclear localization has
been observed with a GFP-tagged construct in transfected HeLa cells (PubMed:12103360). Cytosolic
localization was shown in rat embryonic cardiomyocytes by immunostaining (PubMed:8570168)
Secondary accessions: O75985 Q5THL2 Q8IYH8 Q9BX17 Q9NYX3
Alternative splicing: 2 isoforms:  Q9UPZ9-1   Q9UPZ9-2   

Post-translational modifications:

  • Autophosphorylated on serine and threonine residues. May play a role in enzyme activation1
  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (2 alternative transcripts): 
    NP_055735.1  NP_057597.2  


    ENSEMBL proteins: 
    ENSP00000263043 ENSP00000349458 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse Abcam for Recombinant Proteins
    Human Recombinant Proteins from Abnova (ICK)
                    Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

    2 Gene Ontology (GO) cellular component terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634 nucleus IEA--
    GO:0005737 cytoplasm IEA--
    About this table

    Antibodies for ICK: 
    Browse Antibodies Central at Invitrogen
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Sigma-Aldrich Antibodies for ICK
    Browse R&D Systems for Antibodies
    Search for antibodies at Abcam and the World's Antibody Gateway (free search engine of over 150 antibody companies)
    Monoclonal and Polyclonal Antibodies from Abnova (ICK)
    Novus Biologicals Antibody for ICK

    Assays for ICK: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    Browse R&D Systems for biochemical assays
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    5 InterPro domains/families:
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser_thr_pkinase
     IPR017442 Se/Thr_pkinase-rel
     IPR008271 Ser_thr_pkin_AS
     IPR000719 Prot_kinase_core


       GeneDecks  ICK for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry Q9UPZ9

    ProtoNet protein and cluster: Q9UPZ9

    UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9
    Similarity: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family.
    CDC2/CDKX subfamily
    Similarity: Contains 1 protein kinase domain

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ICK)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ICK)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4): NM_173041

                  Applied Biosystems Silencer® siRNAs for ICK

                  Sigma-Aldrich siRNA and siRNA Panels for ICK  
                         Sigma-Aldrich shRNA Panels and shRNA for ICK  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for ICK
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_014920
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_014920
                                     untagged cDNA clones in CMV expression vector (see all 4): BC035807 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_016513

    UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9
    Function: May play a key role in the development of multiple organ systems and particularly in
    cardiac development (By similarity)
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme Number (IUBMB): EC 2.7.11.22 

    1 MGI phenotypic allele for Ick (no phenotypes)


    5 Gene Ontology (GO) molecular function terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0000287 magnesium ion binding IDA10699974
    GO:0004693 cyclin-dependent protein kinase activity IEA--
    GO:0005524 ATP binding IDA10699974
    GO:0016740 transferase activity IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section



    1 Interacting protein for ICK (Q9UPZ92) via UniProtKB, MINT, and/or STRING
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SMAD1Q157972MINT-62019
    About this table

    4 Gene Ontology (GO) biological process terms (links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468 protein amino acid phosphorylation IDA10699974
    GO:0007165 signal transduction TAS10699974
    GO:0007243 protein kinase cascade IDA10699974
    GO:0007275 multicellular organismal development IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for ICK

    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (ICK)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (ICK)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4): NM_173041

                  Sigma-Aldrich siRNA and siRNA Panels for ICK  
                         Sigma-Aldrich shRNA Panels and shRNA for ICK  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_014920  NM_016513  

    REFSEQ mRNAs for ICK gene (2 alternative transcripts): 

    NM_014920.3   NM_016513.4   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_014920  NM_016513  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_014920
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_014920
                                     untagged cDNA clones in CMV expression vector (see all 4): BC035807 

    Additional cDNA sequence: 

    AB023153.1 AF152469.1 AF225919.1 AJ420557.1 AK074892.1 BC035807.1 BC136420.1 BC136421.1 
    BC152464.1 BX647493.1 CR608568.1 

    8 DOTS entries:

    DT.95372370  DT.115329  DT.100663013  DT.100018316  DT.40195675  DT.100805092  DT.92426700  DT.92426701 

    24/127 AceView cDNA sequences (see all 127 ):

    Z42402 BU186351 AK074892 AA766751 BG681441 AA428138 AA733178 CD245100 
    AW872989 AA993852 AL600198 CR608568 AB023153 NM_016513 AA908456 AI468694 
    BF514365 AA736840 AA452290 AI796746 BQ022166 BM128705 Z38609 AA428139 

    highest scoring ESTs for ICK:

    AB023153 AA908197 AF152469 AK074892 BX490894 AA045951 AA047491 AA428139 AA452290 AA628396 

    Unigene Cluster for ICK:

    Intestinal cell (MAK-like) kinase
    Hs.417022  [show with all ESTs]
    Unigene Representative Sequence: NM_016513


    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for ICK (see all 6 )

    ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16a · 16b · 16c · 16d
    SP1:        -                 -                                         -                       -           -                                 
    SP2:        -     -           -                                         -                       -           -                                 
    SP3:                          -                                                                                                               
    SP4:                                                                                                        -                                 
    SP5:        -     -                                                                                                                           

    About this scheme

    ECgene alternative splicing isoforms for ICK

    2 Ensembl transcripts including schematic representations:
    ENST00000350082  ENST00000356971  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    ICK expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for ICK

    1 / 2 / 3

    4 probe-sets matching ICK gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    41431_at2, 3 U95-A 1 1.00 1.00 1.00 1.00 AB023153 1.00 1.00 1.00 1

    204569_at2, 3 U133-A 1 1.00 1.00 -- -- NM_014920 0.60 1.00 0.82 1

    204569_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    1552837_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene cluster: Hs.417022

    Expression variation in blood from EXPOLDB for ICK

    UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9
    Tissue specificity: Expressed in heart, brain, placenta, pancreas, thymus, prostate, testis, ovary,
    small intestine and colon, with highest levels in placenta and testis. Not detected in spleen.
    Also expressed in many cancer cell lines

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for ICK gene from 5/11 species (see all 11 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    ICK1   -- intestinal cell (MAK-like) kinase 90.45(n)
    93.35(a)
    481843  XM_538964.2  XP_538964.2 
    chimpanzee
    (Pan troglodytes)
    ICK1   -- intestinal cell (MAK-like) kinase 99.47(n)
    99.21(a)
    462772  XM_001154965.1  XP_001154965.1 
    cow
    (Bos taurus)
    ICK1   -- intestinal cell (MAK-like) kinase 88.43(n)
    92.04(a)
    506286  XM_582713.3  XP_582713.3 
    rat
    (Rattus norvegicus)
    Ick1   -- intestinal cell kinase 84.63(n)
    86.01(a)
    84411  NM_138886.1  NP_620241.1 
    mouse
    (Mus musculus)
    Ick1, 5 95
    intestinal cell kinase1, 5 84.63(n)1
    86.49(a)1
    565421  NM_019987.11  NP_064371.11 
     AF2259185  AI8483005  (see all 19)
    About this table        Species with no ortholog for ICK

    ENSEMBL Gene Tree for ICK
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

    Paralogs for ICK gene
    MAK2  

    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/231 NCBI SNPs in ICK are shown (see all 231 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 98)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 6 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs23971351,2
    A,C,F,H52973861(+) TTTAAC/AAAAAC 2 -- ng517Minor allele frequency- A:0.29EU EA WA NA 558
    rs23971361,2
    A,C,F,H52973873(+) TCCACA/GTTGCA 2 -- ng514Minor allele frequency- G:0.17EU EA WA 420
    rs14931051,2
    C,H53003887(-) GTTTCC/TTGAGT 2 P/L mis1 ese34Minor allele frequency- T:0.00EU EA WA 406
    rs339366621,2
    C,F52986613(+) TGGGAC/TTGGCT 2 V/I mis15Minor allele frequency- T:0.04NA EU EA WA 494
    rs37569761,2
    F,H53035357(-) gctaaT/Agttta 2 -- ng313Minor allele frequency- A:0.11EA WA 298
    --
    rs93821671,2
    A52973794(+) tcccaA/Gagtgc 2 -- ng510--------
    --
    rs176162131,2
    F53034910(+) TTTTCT/GGATTT 2 -- ng313Minor allele frequency- G:0.03NA 142
    rs9677621,2
    C53035274(-) CTCTAG/TCCTTA 2 -- ng31 tfbs30--------
    rs15656991,2
    H52977880(+) CTAGGA/CAGAGA 2 -- ut31 ese39Minor allele frequency- C:0.00NA EA MN EU WA 666
    rs22972111,2
    A,C,F,H52986596(+) GCTGGT/CGGCTG 2 P/P syn1 ese33Minor allele frequency- C:0.18EA NA 248
    About this table

    HapMap Linkage Disequilibrium images for ICK (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 612325   disorders: 612651  

    UniProtKB/Swiss-Prot: ICK_HUMAN, Q9UPZ9

  • Defects in ICK are the cause of endocrine-cerebroosteodysplasia (ECO) [MIM:612651]. ECO is
    a previously unidentified neonatal lethal recessive disorder with multiple anomalies involving the
    endocrine, cerebral, and skeletal systems
  • Human Gene Mutation Database: ICK
    Human Genome Epidemiology Navigator: ICK (1 document)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/16 PubMed articles for ICK gene (see all 16 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 22858 HGNC: 21219 AceView: ICK Ensembl:ENSG00000112144 euGenes: HUgn22858
    ECgene: ICK H-InvDB: ICK
    (According to HUGE)
    About This Section

    HUGE: KIAA0936
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

      --
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

      --
    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for ICK:
     TaqMan ® Gene Expression Assays
     TaqMan ® Genotyping Assays
      Free SNP selection tool



      Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
      Invitrogen Antibodies  Invitrogen Assays
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      Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for ICK-related products

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     Millipore Preclinical / Clinical Development Services
     Millipore Immunoassay Services
     Millipore Target Screening & Profiling Services


     Predesigned and custom siRNAs for ICK Antibodies for ICK
     Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
     Lentivirus-delivered shRNAs for ICK Browse small molecules at Sigma-Aldrich
     "Your Favorite Gene" Pathwaysfeedback


      
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     Antibodies for ICK

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