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Aliases for HYDIN2 Gene

Aliases for HYDIN2 Gene

  • HYDIN2, Axonemal Central Pair Apparatus Protein (Pseudogene) 2 3 5
  • HYDIN, Axonemal Central Pair Apparatus Protein Pseudogene 1 2 3
  • Hydrocephalus Inducing Homolog 2 (Mouse) 2
  • Hydrocephalus Inducing Homolog 2 3
  • HYDINP1 3

External Ids for HYDIN2 Gene

Previous HGNC Symbols for HYDIN2 Gene

  • HYDINP1

Previous GeneCards Identifiers for HYDIN2 Gene

  • GC00U922123
  • GC01U901593
  • GC16M069399
  • GC16M070841
  • GC01M7Q0054

Summaries for HYDIN2 Gene

GeneCards Summary for HYDIN2 Gene

HYDIN2 (HYDIN2, Axonemal Central Pair Apparatus Protein (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HYDIN2 Gene

Genomics for HYDIN2 Gene

Regulatory Elements for HYDIN2 Gene

Enhancers for HYDIN2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G146701 0.2 Ensembl 0.1 +153.8 153835 0.4 HYDIN2 ENSG00000274450
GH01G146729 0.2 Ensembl 0.1 +182.6 182634 0.4 ENSG00000274450 HYDIN2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HYDIN2 on UCSC Golden Path with GeneCards custom track

Genomic Location for HYDIN2 Gene

Chromosome:
1
Start:
146,547,367 bp from pter
End:
146,914,294 bp from pter
Size:
366,928 bases
Orientation:
Plus strand

Genomic View for HYDIN2 Gene

Genes around HYDIN2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HYDIN2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HYDIN2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HYDIN2 Gene

Proteins for HYDIN2 Gene

Post-translational modifications for HYDIN2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HYDIN2 Gene

Domains & Families for HYDIN2 Gene

Suggested Antigen Peptide Sequences for HYDIN2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HYDIN2 Gene

Function for HYDIN2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HYDIN2 Gene

Localization for HYDIN2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HYDIN2 Gene

Pathways & Interactions for HYDIN2 Gene

SuperPathways for HYDIN2 Gene

No Data Available

Interacting Proteins for HYDIN2 Gene

Gene Ontology (GO) - Biological Process for HYDIN2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HYDIN2 Gene

Drugs & Compounds for HYDIN2 Gene

No Compound Related Data Available

Transcripts for HYDIN2 Gene

mRNA/cDNA for HYDIN2 Gene

(7) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HYDIN2 Gene

HYDIN2, axonemal central pair apparatus protein (pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HYDIN2 Gene

No ASD Table

Relevant External Links for HYDIN2 Gene

GeneLoc Exon Structure for
HYDIN2
ECgene alternative splicing isoforms for
HYDIN2

Expression for HYDIN2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HYDIN2 Gene

NURSA nuclear receptor signaling pathways regulating expression of HYDIN2 Gene:

HYDIN2

SOURCE GeneReport for Unigene cluster for HYDIN2 Gene:

Hs.648712
genes like me logo Genes that share expression patterns with HYDIN2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HYDIN2 Gene

Orthologs for HYDIN2 Gene

Evolution for HYDIN2 Gene

ENSEMBL:
Gene Tree for HYDIN2 (if available)
TreeFam:
Gene Tree for HYDIN2 (if available)

No data available for Orthologs for HYDIN2 Gene

Paralogs for HYDIN2 Gene

No data available for Paralogs for HYDIN2 Gene

Variants for HYDIN2 Gene

Sequence variations from dbSNP and Humsavar for HYDIN2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1022215 -- 146,747,327(-) tgaaa(C/G)caaaa intron-variant
rs10492835 -- 146,642,505(-) GAAAC(A/G)GAGAA intron-variant
rs1067037 -- 146,722,146(-) gctac(A/G)ggagg intron-variant
rs10672157 -- 146,576,192(-) AAACA(-/AT)ATAGT intron-variant
rs10713271 -- 146,754,880(-) AGCTT(-/G)GGGTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HYDIN2 Gene

Variant ID Type Subtype PubMed ID
dgv327n100 CNV gain 25217958
dgv66e199 CNV deletion 23128226
esv2761299 CNV gain+loss 21179565
nsv1003688 CNV gain 25217958
nsv1005055 CNV loss 25217958
nsv1132304 CNV duplication 24896259
nsv509457 CNV insertion 20534489
nsv510962 OTHER complex 20534489

Relevant External Links for HYDIN2 Gene

Human Gene Mutation Database (HGMD)
HYDIN2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
HYDIN2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HYDIN2 Gene

Disorders for HYDIN2 Gene

No disorders were found for HYDIN2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HYDIN2 Gene

Publications for HYDIN2 Gene

  1. A 360-kb interchromosomal duplication of the human HYDIN locus. (PMID: 16938426) Doggett N.A. … Han C. (Genomics 2006) 2 3 64
  2. The birth of a human-specific neural gene by incomplete duplication and gene fusion. (PMID: 28279197) Dougherty M.L. … Eichler E.E. (Genome Biol. 2017) 3 64
  3. Why do cellular proteins linked to K63-polyubiquitin chains not associate with proteasomes? (PMID: 23314748) Nathan J.A. … Goldberg A.L. (EMBO J. 2013) 3 64
  4. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 3 64
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for HYDIN2 Gene

Sources for HYDIN2 Gene

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