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Aliases for HYDIN2 Gene

Aliases for HYDIN2 Gene

  • HYDIN2, Axonemal Central Pair Apparatus Protein (Pseudogene) 2 3 5
  • HYDIN, Axonemal Central Pair Apparatus Protein Pseudogene 1 2 3
  • Hydrocephalus Inducing Homolog 2 (Mouse) 2
  • Hydrocephalus Inducing Homolog 2 3
  • HYDINP1 3

External Ids for HYDIN2 Gene

Previous HGNC Symbols for HYDIN2 Gene

  • HYDINP1

Previous GeneCards Identifiers for HYDIN2 Gene

  • GC00U922123
  • GC01U901593
  • GC16M069399
  • GC16M070841
  • GC01M7Q0054

Summaries for HYDIN2 Gene

GeneCards Summary for HYDIN2 Gene

HYDIN2 (HYDIN2, Axonemal Central Pair Apparatus Protein (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HYDIN2 Gene

Genomics for HYDIN2 Gene

Regulatory Elements for HYDIN2 Gene

Enhancers for HYDIN2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around HYDIN2 on UCSC Golden Path with GeneCards custom track

Genomic Location for HYDIN2 Gene

Chromosome:
1
Start:
146,547,367 bp from pter
End:
146,914,294 bp from pter
Size:
366,928 bases
Orientation:
Plus strand

Genomic View for HYDIN2 Gene

Genes around HYDIN2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HYDIN2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HYDIN2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HYDIN2 Gene

Proteins for HYDIN2 Gene

Post-translational modifications for HYDIN2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HYDIN2 Gene

Domains & Families for HYDIN2 Gene

Suggested Antigen Peptide Sequences for HYDIN2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HYDIN2 Gene

Function for HYDIN2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HYDIN2 Gene

Localization for HYDIN2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HYDIN2 Gene

Pathways & Interactions for HYDIN2 Gene

SuperPathways for HYDIN2 Gene

No Data Available

Interacting Proteins for HYDIN2 Gene

Gene Ontology (GO) - Biological Process for HYDIN2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HYDIN2 Gene

Drugs & Compounds for HYDIN2 Gene

No Compound Related Data Available

Transcripts for HYDIN2 Gene

mRNA/cDNA for HYDIN2 Gene

(7) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HYDIN2 Gene

HYDIN2, axonemal central pair apparatus protein (pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HYDIN2 Gene

No ASD Table

Relevant External Links for HYDIN2 Gene

GeneLoc Exon Structure for
HYDIN2
ECgene alternative splicing isoforms for
HYDIN2

Expression for HYDIN2 Gene

mRNA expression in normal human tissues for HYDIN2 Gene

SOURCE GeneReport for Unigene cluster for HYDIN2 Gene Hs.648712

genes like me logo Genes that share expression patterns with HYDIN2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HYDIN2 Gene

Orthologs for HYDIN2 Gene

Evolution for HYDIN2 Gene

ENSEMBL:
Gene Tree for HYDIN2 (if available)
TreeFam:
Gene Tree for HYDIN2 (if available)

No data available for Orthologs for HYDIN2 Gene

Paralogs for HYDIN2 Gene

No data available for Paralogs for HYDIN2 Gene

Variants for HYDIN2 Gene

Sequence variations from dbSNP and Humsavar for HYDIN2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs195616 -- 146,674,884(-) gtgcc(C/G)agctg intron-variant
rs195646 -- 146,618,148(-) gacct(C/G)aagtg intron-variant
rs195648 -- 146,706,977(-) tccat(C/T)ctggg intron-variant
rs195653 -- 146,699,709(-) caaac(A/C)aacaa intron-variant
rs411031 -- 146,600,408(+) tatat(A/T)atata intron-variant

Relevant External Links for HYDIN2 Gene

Human Gene Mutation Database (HGMD)
HYDIN2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HYDIN2 Gene

Disorders for HYDIN2 Gene

No disorders were found for HYDIN2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HYDIN2 Gene

Publications for HYDIN2 Gene

  1. A 360-kb interchromosomal duplication of the human HYDIN locus. (PMID: 16938426) Doggett N.A. … Han C. (Genomics 2006) 2 3 67
  2. Why do cellular proteins linked to K63-polyubiquitin chains not associate with proteasomes? (PMID: 23314748) Nathan J.A. … Goldberg A.L. (EMBO J. 2013) 3
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

Products for HYDIN2 Gene

Sources for HYDIN2 Gene

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