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Aliases for HYALP1 Gene

Aliases for HYALP1 Gene

  • Hyaluronoglucosaminidase Pseudogene 1 2 3 5
  • HYAL6 3

External Ids for HYALP1 Gene

Previous GeneCards Identifiers for HYALP1 Gene

  • GC07P121932
  • GC07P122994
  • GC07P123008
  • GC07P123048
  • GC07P123241
  • GC07P123454
  • GC07P117817

Summaries for HYALP1 Gene

GeneCards Summary for HYALP1 Gene

HYALP1 (Hyaluronoglucosaminidase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HYALP1 Gene

Genomics for HYALP1 Gene

Regulatory Elements for HYALP1 Gene

Enhancers for HYALP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G123797 1.3 Ensembl ENCODE 0.4 -16.0 -15993 2.2 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 ZBTB7B FOS REST KAT8 HYAL4 RNU6-11P HYALP1
GH07G123824 0.8 ENCODE 0.4 +10.7 10743 0.2 HDGF SOX13 PKNOX1 FOXA2 SIN3A MAX BMI1 CEBPG EED RELB RNU6-11P LMOD2 HYAL4 HYALP1
GH07G123819 0.4 ENCODE 0.4 +5.7 5713 1.3 GATA3 RNU6-11P HYAL4 LMOD2 HYALP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HYALP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HYALP1 Gene

Chromosome:
7
Start:
123,814,139 bp from pter
End:
123,829,252 bp from pter
Size:
15,114 bases
Orientation:
Plus strand

Genomic View for HYALP1 Gene

Genes around HYALP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HYALP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HYALP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HYALP1 Gene

Proteins for HYALP1 Gene

Post-translational modifications for HYALP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HYALP1 Gene

Domains & Families for HYALP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HYALP1 Gene

Function for HYALP1 Gene

Molecular function for HYALP1 Gene

GENATLAS Biochemistry:
hyaluroglucosaminidase pseudogene 1,widely expressed,involved in glycosaminoglycan catabolism

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HYALP1 Gene

Localization for HYALP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HYALP1 Gene

Pathways & Interactions for HYALP1 Gene

SuperPathways for HYALP1 Gene

No Data Available

Interacting Proteins for HYALP1 Gene

Gene Ontology (GO) - Biological Process for HYALP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HYALP1 Gene

Drugs & Compounds for HYALP1 Gene

No Compound Related Data Available

Transcripts for HYALP1 Gene

mRNA/cDNA for HYALP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HYALP1 Gene

No ASD Table

Relevant External Links for HYALP1 Gene

GeneLoc Exon Structure for
HYALP1
ECgene alternative splicing isoforms for
HYALP1

Expression for HYALP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HYALP1 Gene

mRNA differential expression in normal tissues according to GTEx for HYALP1 Gene

This gene is overexpressed in Testis (x35.0) and Bladder (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of HYALP1 Gene:

HYALP1

SOURCE GeneReport for Unigene cluster for HYALP1 Gene:

Hs.381305
genes like me logo Genes that share expression patterns with HYALP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HYALP1 Gene

Orthologs for HYALP1 Gene

Evolution for HYALP1 Gene

ENSEMBL:
Gene Tree for HYALP1 (if available)
TreeFam:
Gene Tree for HYALP1 (if available)

No data available for Orthologs for HYALP1 Gene

Paralogs for HYALP1 Gene

No data available for Paralogs for HYALP1 Gene

Variants for HYALP1 Gene

Sequence variations from dbSNP and Humsavar for HYALP1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000788962 -- 123,812,168(+) TGTGG(A/G)ATTAT intron-variant, upstream-variant-2KB
rs1003152364 -- 123,812,560(+) CTCCT(A/G)GAAGA intron-variant, upstream-variant-2KB
rs1003371451 -- 123,813,857(+) TTGGG(C/T)TAGCG intron-variant, upstream-variant-2KB
rs1003383319 -- 123,819,197(+) TACCT(G/T)GTGGT intron-variant
rs1004049621 -- 123,815,416(+) GCTTA(G/T)GGTAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HYALP1 Gene

Variant ID Type Subtype PubMed ID
esv3614860 CNV gain 21293372
esv3891198 CNV gain 25118596

Relevant External Links for HYALP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HYALP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HYALP1 Gene

Disorders for HYALP1 Gene

Relevant External Links for HYALP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HYALP1

No disorders were found for HYALP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HYALP1 Gene

Publications for HYALP1 Gene

  1. Expression analysis of six paralogous human hyaluronidase genes clustered on chromosomes 3p21 and 7q31. (PMID: 10493834) Csoka A.B. … Stern R. (Genomics 1999) 2 3 64
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 3 64
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64

Products for HYALP1 Gene

Sources for HYALP1 Gene

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