Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HYALP1 Gene

Aliases for HYALP1 Gene

  • Hyaluronoglucosaminidase Pseudogene 1 2 3
  • HYAL6 3

External Ids for HYALP1 Gene

Previous GeneCards Identifiers for HYALP1 Gene

  • GC07P121932
  • GC07P122994
  • GC07P123008
  • GC07P123048
  • GC07P123241
  • GC07P123454
  • GC07P117817

Summaries for HYALP1 Gene

GeneCards Summary for HYALP1 Gene

HYALP1 (Hyaluronoglucosaminidase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HYALP1 Gene

Genomics for HYALP1 Gene

Regulatory Elements for HYALP1 Gene

Genomic Location for HYALP1 Gene

Start:
123,814,139 bp from pter
End:
123,829,252 bp from pter
Size:
15,114 bases
Orientation:
Plus strand

Genomic View for HYALP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HYALP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HYALP1 Gene

Proteins for HYALP1 Gene

Post-translational modifications for HYALP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HYALP1 Gene

Domains for HYALP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HYALP1 Gene

Function for HYALP1 Gene

Molecular function for HYALP1 Gene

GENATLAS Biochemistry: hyaluroglucosaminidase pseudogene 1,widely expressed,involved in glycosaminoglycan catabolism

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HYALP1 Gene

Localization for HYALP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HYALP1 Gene

Pathways for HYALP1 Gene

SuperPathways for HYALP1 Gene

No Data Available

Interacting Proteins for HYALP1 Gene

Gene Ontology (GO) - Biological Process for HYALP1 Gene

None

No data available for Pathways by source for HYALP1 Gene

Transcripts for HYALP1 Gene

mRNA/cDNA for HYALP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HYALP1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for HYALP1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HYALP1 Gene

No ASD Table

Relevant External Links for HYALP1 Gene

GeneLoc Exon Structure for
HYALP1
ECgene alternative splicing isoforms for
HYALP1

Expression for HYALP1 Gene

mRNA expression in normal human tissues for HYALP1 Gene

mRNA differential expression in normal tissues according to GTEx for HYALP1 Gene

This gene is overexpressed in Testis (35.0) and Bladder (4.8).

SOURCE GeneReport for Unigene cluster for HYALP1 Gene Hs.381305

genes like me logo Genes that share expressions with HYALP1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for HYALP1 Gene

Orthologs for HYALP1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for HYALP1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Hyal6 16
Species with no ortholog for HYALP1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for HYALP1 Gene

ENSEMBL:
Gene Tree for HYALP1 (if available)
TreeFam:
Gene Tree for HYALP1 (if available)

Paralogs for HYALP1 Gene

No data available for Paralogs for HYALP1 Gene

Variants for HYALP1 Gene

Sequence variations from dbSNP and Humsavar for HYALP1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs637015 -- 123,815,862(+) ACTTA(A/G)GTTTG intron-variant
rs2109351 -- 123,814,153(+) CCATG(A/G)GTGGC nc-transcript-variant
rs2533892 -- 123,815,375(+) AGGTA(A/G)CAGCA intron-variant
rs2533893 -- 123,818,351(+) ATTCT(G/T)CCTGT intron-variant
rs2533894 -- 123,819,324(+) TCCTG(A/G)TACCT intron-variant

Relevant External Links for HYALP1 Gene

HapMap Linkage Disequilibrium report
HYALP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for HYALP1 Gene

Disorders for HYALP1 Gene

No disorders were found for HYALP1 Gene.

No data available for UniProtKB/Swiss-Prot for HYALP1 Gene

Publications for HYALP1 Gene

  1. Expression analysis of six paralogous human hyaluronidase genes clustered on chromosomes 3p21 and 7q31. (PMID: 10493834) Csoka A.B. … Stern R. (Genomics 1999) 2 3
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  3. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 3

Products for HYALP1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HYALP1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HYALP1
    • Block miRNA regulation of HYALP1 using miScript Target Protectors

    Sources for HYALP1 Gene

    Back to Top

    Content