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Aliases for HYALP1 Gene

Aliases for HYALP1 Gene

  • Hyaluronoglucosaminidase Pseudogene 1 2 3 5
  • HYAL6 3

External Ids for HYALP1 Gene

Previous GeneCards Identifiers for HYALP1 Gene

  • GC07P121932
  • GC07P122994
  • GC07P123008
  • GC07P123048
  • GC07P123241
  • GC07P123454
  • GC07P117817

Summaries for HYALP1 Gene

GeneCards Summary for HYALP1 Gene

HYALP1 (Hyaluronoglucosaminidase Pseudogene 1) is a Pseudogene.

Additional gene information for HYALP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HYALP1 Gene

Genomics for HYALP1 Gene

GeneHancer (GH) Regulatory Elements for HYALP1 Gene

Promoters and enhancers for HYALP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I123797 Enhancer 1.2 Ensembl ENCODE 0.4 -16.0 -15992 2.2 PKNOX1 FOXA2 ARNT ARID4B NEUROD1 SIN3A FEZF1 ZBTB7B ZNF213 FOS ENSG00000272686 HYAL4 RNU6-11P HYALP1
GH07I123824 Enhancer 0.7 ENCODE 0.4 +10.7 10743 0.2 HDGF SOX13 PKNOX1 FOXA2 SIN3A BMI1 GATA3 BCLAF1 IKZF2 SMARCE1 RNU6-11P LMOD2 HYAL4 HYALP1
GH07I123819 Enhancer 0.3 ENCODE 0.4 +5.7 5712 1.3 GATA3 RNU6-11P HYAL4 LMOD2 HYALP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HYALP1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the HYALP1 gene promoter:

Genomic Locations for HYALP1 Gene

Genomic Locations for HYALP1 Gene
chr7:123,814,139-123,829,252
(GRCh38/hg38)
Size:
15,114 bases
Orientation:
Plus strand
chr7:123,454,193-123,469,306
(GRCh37/hg19)

Genomic View for HYALP1 Gene

Genes around HYALP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HYALP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HYALP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HYALP1 Gene

Proteins for HYALP1 Gene

Post-translational modifications for HYALP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HYALP1 Gene

Domains & Families for HYALP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HYALP1 Gene

Function for HYALP1 Gene

Molecular function for HYALP1 Gene

GENATLAS Biochemistry:
hyaluroglucosaminidase pseudogene 1,widely expressed,involved in glycosaminoglycan catabolism

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HYALP1 Gene

Localization for HYALP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HYALP1 Gene

Pathways & Interactions for HYALP1 Gene

SuperPathways for HYALP1 Gene

No Data Available

Interacting Proteins for HYALP1 Gene

Gene Ontology (GO) - Biological Process for HYALP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HYALP1 Gene

Drugs & Compounds for HYALP1 Gene

No Compound Related Data Available

Transcripts for HYALP1 Gene

mRNA/cDNA for HYALP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HYALP1 Gene

No ASD Table

Relevant External Links for HYALP1 Gene

GeneLoc Exon Structure for
HYALP1
ECgene alternative splicing isoforms for
HYALP1

Expression for HYALP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HYALP1 Gene

mRNA differential expression in normal tissues according to GTEx for HYALP1 Gene

This gene is overexpressed in Testis (x35.0) and Bladder (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of HYALP1 Gene:

HYALP1

SOURCE GeneReport for Unigene cluster for HYALP1 Gene:

Hs.381305
genes like me logo Genes that share expression patterns with HYALP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HYALP1 Gene

Orthologs for HYALP1 Gene

Evolution for HYALP1 Gene

ENSEMBL:
Gene Tree for HYALP1 (if available)
TreeFam:
Gene Tree for HYALP1 (if available)

No data available for Orthologs for HYALP1 Gene

Paralogs for HYALP1 Gene

No data available for Paralogs for HYALP1 Gene

Variants for HYALP1 Gene

Sequence variations from dbSNP and Humsavar for HYALP1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000788962 -- 123,812,168(+) A/G upstream_transcript_variant
rs1003152364 -- 123,812,560(+) A/G upstream_transcript_variant
rs1003371451 -- 123,813,857(+) T/C upstream_transcript_variant
rs1003383319 -- 123,819,197(+) T/G intron_variant
rs1004049621 -- 123,815,416(+) G/A/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for HYALP1 Gene

Variant ID Type Subtype PubMed ID
esv3614860 CNV gain 21293372
esv3891198 CNV gain 25118596

Additional Variant Information for HYALP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HYALP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HYALP1 Gene

Disorders for HYALP1 Gene

Additional Disease Information for HYALP1

No disorders were found for HYALP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HYALP1 Gene

Publications for HYALP1 Gene

  1. Expression analysis of six paralogous human hyaluronidase genes clustered on chromosomes 3p21 and 7q31. (PMID: 10493834) Csóka AB … Stern R (Genomics 1999) 2 3 58
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3 58
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58

Products for HYALP1 Gene

Sources for HYALP1 Gene

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