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Aliases for HTR7P1 Gene

Aliases for HTR7P1 Gene

  • 5-Hydroxytryptamine Receptor 7 Pseudogene 1 2 3
  • 5-Hydroxytryptamine (Serotonin) Receptor 7 Pseudogene 1 2 3 5
  • 5-Hydroxytryptamine (Serotonin) Receptor 7 Pseudogene 2
  • Serotonin-7 Receptor Pseudogene 3
  • HTR7P 3

External Ids for HTR7P1 Gene

Previous HGNC Symbols for HTR7P1 Gene

  • HTR7P

Previous GeneCards Identifiers for HTR7P1 Gene

  • GC12P013153
  • GC12P013154

Summaries for HTR7P1 Gene

GeneCards Summary for HTR7P1 Gene

HTR7P1 (5-Hydroxytryptamine Receptor 7 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HTR7P1 Gene

Genomics for HTR7P1 Gene

Regulatory Elements for HTR7P1 Gene

Enhancers for HTR7P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around HTR7P1 on UCSC Golden Path with GeneCards custom track

Promoters for HTR7P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HTR7P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HTR7P1 Gene

Chromosome:
12
Start:
13,000,420 bp from pter
End:
13,004,830 bp from pter
Size:
4,411 bases
Orientation:
Plus strand

Genomic View for HTR7P1 Gene

Genes around HTR7P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTR7P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTR7P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HTR7P1 Gene

Proteins for HTR7P1 Gene

Post-translational modifications for HTR7P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTR7P1 Gene

Domains & Families for HTR7P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HTR7P1 Gene

Function for HTR7P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTR7P1 Gene

Localization for HTR7P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HTR7P1 Gene

Pathways & Interactions for HTR7P1 Gene

SuperPathways for HTR7P1 Gene

No Data Available

Interacting Proteins for HTR7P1 Gene

Gene Ontology (GO) - Biological Process for HTR7P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HTR7P1 Gene

Drugs & Compounds for HTR7P1 Gene

No Compound Related Data Available

Transcripts for HTR7P1 Gene

mRNA/cDNA for HTR7P1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HTR7P1 Gene

No ASD Table

Relevant External Links for HTR7P1 Gene

GeneLoc Exon Structure for
HTR7P1
ECgene alternative splicing isoforms for
HTR7P1

Expression for HTR7P1 Gene

mRNA expression in normal human tissues for HTR7P1 Gene

SOURCE GeneReport for Unigene cluster for HTR7P1 Gene Hs.593282

genes like me logo Genes that share expression patterns with HTR7P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HTR7P1 Gene

Orthologs for HTR7P1 Gene

Evolution for HTR7P1 Gene

ENSEMBL:
Gene Tree for HTR7P1 (if available)
TreeFam:
Gene Tree for HTR7P1 (if available)

No data available for Orthologs for HTR7P1 Gene

Paralogs for HTR7P1 Gene

No data available for Paralogs for HTR7P1 Gene

Variants for HTR7P1 Gene

Sequence variations from dbSNP and Humsavar for HTR7P1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs7305011 -- 13,003,772(+) TGGGG(A/G)CATAA nc-transcript-variant
rs7305778 -- 13,003,601(+) ACCCA(C/T)CTGTA nc-transcript-variant
rs35516160 -- 13,004,909(+) TCCAT(-/A)ATGCT downstream-variant-500B
rs35546045 -- 13,002,846(+) ATAAT(-/G)GGAGA nc-transcript-variant
rs35581228 -- 13,003,684(+) CCCAT(-/G)GGGAT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for HTR7P1 Gene

Variant ID Type Subtype PubMed ID
esv2745567 CNV Deletion 23290073
nsv832333 CNV Gain 17160897
nsv826260 CNV Gain 20364138

Relevant External Links for HTR7P1 Gene

HapMap Linkage Disequilibrium report
HTR7P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HTR7P1 Gene

Disorders for HTR7P1 Gene

Relevant External Links for HTR7P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HTR7P1

No disorders were found for HTR7P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HTR7P1 Gene

Publications for HTR7P1 Gene

  1. A human serotonin-7 receptor pseudogene. (PMID: 9473718) Qian I.H. … Seeman P. (Brain Res. Mol. Brain Res. 1998) 2 3 23 67
  2. The human serotonin-7 receptor pseudogene: variation and chromosome location. (PMID: 9785699) Nam D. … Seeman P. (J Psychiatry Neurosci 1998) 23

Products for HTR7P1 Gene

Sources for HTR7P1 Gene

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