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Aliases for HTR7P1 Gene

Aliases for HTR7P1 Gene

  • 5-Hydroxytryptamine Receptor 7 Pseudogene 1 2 3 5
  • 5-Hydroxytryptamine (Serotonin) Receptor 7 Pseudogene 1 2 3
  • 5-Hydroxytryptamine (Serotonin) Receptor 7 Pseudogene 2
  • Serotonin-7 Receptor Pseudogene 3
  • HTR7P 3

External Ids for HTR7P1 Gene

Previous HGNC Symbols for HTR7P1 Gene

  • HTR7P

Previous GeneCards Identifiers for HTR7P1 Gene

  • GC12P013153
  • GC12P013154

Summaries for HTR7P1 Gene

GeneCards Summary for HTR7P1 Gene

HTR7P1 (5-Hydroxytryptamine Receptor 7 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HTR7P1 Gene

Genomics for HTR7P1 Gene

Regulatory Elements for HTR7P1 Gene

Enhancers for HTR7P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F012990 1.5 FANTOM5 Ensembl ENCODE 28 -7.8 -7802 4.4 PKNOX1 MAX KLF17 ZIC2 RAD21 YY1 ZNF664 ZNF121 ZNF316 GATA3 HTR7P1 ENSG00000255621 HEBP1 DUSP16 FAM234B EMP1 GC12M012990 GC12P012980
GH12F012998 1 ENCODE 31.7 +0.1 77 3.3 PKNOX1 SIN3A DMAP1 ZNF48 YY1 GLIS2 SP3 SP5 REST ZNF658 HTR7P1 HEBP1 ENSG00000255621 GC12P013002
GH12F013193 1.5 FANTOM5 Ensembl ENCODE 15.8 +202.7 202673 19.5 PKNOX1 ZNF133 SIN3A FEZF1 ZNF2 YY1 ZNF143 FOS YY2 REST HTR7P1 MIR614 GSG1 LOC100506314 ENSG00000255621 HEBP1 ENSG00000221611 ENSG00000256011 GPRC5D FAM234B
GH12F012396 1.3 Ensembl ENCODE 11.2 -601.5 -601548 3.9 PKNOX1 ZNF133 ARID4B SIN3A FEZF1 GLI4 ZNF48 ZNF2 YY1 ZNF121 DDX47 HTR7P1 LRP6 CREBL2 GPR19 ENSG00000240424 DUSP16 LOC100506248 MANSC1 CDKN1B
GH12F013124 1.4 FANTOM5 Ensembl ENCODE 9.7 +125.0 125004 1.5 CTCF TFAP4 ZFP64 JUN ZNF2 RAD21 ZNF48 ZNF143 SMC3 FOS EMP1 MIR614 HEBP1 HTR7P1 ENSG00000255621 GC12P013123 GC12P013128 PIR54575
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HTR7P1 on UCSC Golden Path with GeneCards custom track

Promoters for HTR7P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000426687 -20 3201 PKNOX1 SIN3A DMAP1 ZNF48 GLIS2 SP3 SP5 REST ETV4 HMBOX1

Genomic Location for HTR7P1 Gene

13,000,420 bp from pter
13,004,830 bp from pter
4,411 bases
Plus strand

Genomic View for HTR7P1 Gene

Genes around HTR7P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTR7P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTR7P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HTR7P1 Gene

Proteins for HTR7P1 Gene

Post-translational modifications for HTR7P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTR7P1 Gene

Domains & Families for HTR7P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HTR7P1 Gene

Function for HTR7P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTR7P1 Gene

Localization for HTR7P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HTR7P1 Gene

Pathways & Interactions for HTR7P1 Gene

SuperPathways for HTR7P1 Gene

No Data Available

Interacting Proteins for HTR7P1 Gene

Gene Ontology (GO) - Biological Process for HTR7P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for HTR7P1 Gene

Transcripts for HTR7P1 Gene

mRNA/cDNA for HTR7P1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HTR7P1 Gene

No ASD Table

Relevant External Links for HTR7P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HTR7P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HTR7P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HTR7P1 Gene:


SOURCE GeneReport for Unigene cluster for HTR7P1 Gene:

genes like me logo Genes that share expression patterns with HTR7P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HTR7P1 Gene

Orthologs for HTR7P1 Gene

Evolution for HTR7P1 Gene

Gene Tree for HTR7P1 (if available)
Gene Tree for HTR7P1 (if available)

No data available for Orthologs for HTR7P1 Gene

Paralogs for HTR7P1 Gene

No data available for Paralogs for HTR7P1 Gene

Variants for HTR7P1 Gene

Sequence variations from dbSNP and Humsavar for HTR7P1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10772616 -- 12,999,394(+) TACTT(C/G)AATAC intron-variant, upstream-variant-2KB
rs11055189 -- 12,999,414(+) cgatc(C/T)gatca intron-variant, upstream-variant-2KB
rs111516826 -- 13,002,058(+) AGCCT(C/T)TCACG intron-variant, nc-transcript-variant, upstream-variant-2KB
rs111941392 -- 13,005,093(+) CTCTC(-/TT)GTCAT intron-variant, downstream-variant-500B
rs112035569 -- 13,005,311(+) AGACA(A/G)GGTTT intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for HTR7P1 Gene

Variant ID Type Subtype PubMed ID
nsv832333 CNV gain 17160897
nsv826260 CNV gain 20364138
nsv557607 CNV loss 21841781
esv2745567 CNV deletion 23290073

Relevant External Links for HTR7P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HTR7P1 Gene

Disorders for HTR7P1 Gene

Relevant External Links for HTR7P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for HTR7P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HTR7P1 Gene

Publications for HTR7P1 Gene

  1. A human serotonin-7 receptor pseudogene. (PMID: 9473718) Qian I.H. … Seeman P. (Brain Res. Mol. Brain Res. 1998) 2 3 22 64
  2. The human serotonin-7 receptor pseudogene: variation and chromosome location. (PMID: 9785699) Nam D. … Seeman P. (J Psychiatry Neurosci 1998) 22 64

Products for HTR7P1 Gene

Sources for HTR7P1 Gene

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