Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HTR1DP1 Gene

Aliases for HTR1DP1 Gene

  • 5-Hydroxytryptamine Receptor 1D Pseudogene 1 2 3 5
  • 5-Hydroxytryptamine (Serotonin) Receptor 1D Pseudogene 1 2

External Ids for HTR1DP1 Gene

Previous GeneCards Identifiers for HTR1DP1 Gene

  • GC12U990039
  • GC12M001262

Summaries for HTR1DP1 Gene

GeneCards Summary for HTR1DP1 Gene

HTR1DP1 (5-Hydroxytryptamine Receptor 1D Pseudogene 1) is a Pseudogene.

Additional gene information for HTR1DP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HTR1DP1 Gene

Genomics for HTR1DP1 Gene

Regulatory Elements for HTR1DP1 Gene

Enhancers for HTR1DP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H001171 1.2 Ensembl ENCODE 0.4 -19.0 -18957 1 HDAC1 PKNOX1 INSM2 KLF17 FEZF1 RFX5 TCF12 GTF3C2 GATA2 ZNF366 KDM5A WNT5B ENSG00000249028 DCP1B ENSG00000250132 ERC1 RAD52 HTR1DP1 GC12P001195
GH12H001129 0.9 ENCODE 0.3 +22.5 22476 2 HDAC1 ELF3 FOXA2 RAD21 RARA YY1 ZNF366 ZSCAN5C SMARCC1 REST ENSG00000249028 HTR1DP1 GC12P001011
GH12H001114 0.9 Ensembl ENCODE 0.3 +37.0 36961 3 CTCF JUN CEBPB REST ZNF501 EP300 JUND PRDM6 BCL6B STAT3 ERC1 WNT5B RAD52 ENSG00000250132 ENSG00000249028 HTR1DP1 GC12P001011
GH12H001131 0.7 ENCODE 0.3 +21.1 21107 0 FOXA2 MAX REST RAD21 FOXA1 YY1 ATF3 ZSCAN5C ZBTB33 HNF4A ENSG00000249028 HTR1DP1 GC12P001011
GH12H001118 0.7 ENCODE 0.3 +34.9 34870 0 CTCF ZNF654 RB1 ZSCAN4 TRIM22 REST ZNF501 ZBTB40 RAD21 OSR2 WNT5B ERC1 RAD52 ENSG00000250132 HTR1DP1 GC12P001011
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HTR1DP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HTR1DP1 Gene

Chromosome:
12
Start:
1,151,810 bp from pter
End:
1,153,059 bp from pter
Size:
1,250 bases
Orientation:
Minus strand

Genomic View for HTR1DP1 Gene

Genes around HTR1DP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTR1DP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTR1DP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HTR1DP1 Gene

Proteins for HTR1DP1 Gene

Post-translational modifications for HTR1DP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTR1DP1 Gene

Domains & Families for HTR1DP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HTR1DP1 Gene

Function for HTR1DP1 Gene

Molecular function for HTR1DP1 Gene

GENATLAS Biochemistry:
5-hydroxytryptamine (serotonin) receptor,subtype 1D,G protein coupled receptor superfamily,pseudogene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HTR1DP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTR1DP1 Gene

Localization for HTR1DP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HTR1DP1 Gene

Pathways & Interactions for HTR1DP1 Gene

SuperPathways for HTR1DP1 Gene

No Data Available

Interacting Proteins for HTR1DP1 Gene

Gene Ontology (GO) - Biological Process for HTR1DP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HTR1DP1 Gene

Drugs & Compounds for HTR1DP1 Gene

No Compound Related Data Available

Transcripts for HTR1DP1 Gene

mRNA/cDNA for HTR1DP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HTR1DP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HTR1DP1 Gene

No ASD Table

Relevant External Links for HTR1DP1 Gene

GeneLoc Exon Structure for
HTR1DP1
ECgene alternative splicing isoforms for
HTR1DP1

Expression for HTR1DP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HTR1DP1 Gene:

HTR1DP1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HTR1DP1 Gene

Orthologs for HTR1DP1 Gene

Evolution for HTR1DP1 Gene

ENSEMBL:
Gene Tree for HTR1DP1 (if available)
TreeFam:
Gene Tree for HTR1DP1 (if available)

No data available for Orthologs for HTR1DP1 Gene

Paralogs for HTR1DP1 Gene

No data available for Paralogs for HTR1DP1 Gene

Variants for HTR1DP1 Gene

Relevant External Links for HTR1DP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HTR1DP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HTR1DP1 Gene

Disorders for HTR1DP1 Gene

No disorders were found for HTR1DP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HTR1DP1 Gene

Publications for HTR1DP1 Gene

  1. An Alu sequence interrupts a human 5-hydroxytryptamine1D receptor pseudogene. (PMID: 8444354) Nguyen T … O'Dowd BF (Gene 1993) 2 3 60

Products for HTR1DP1 Gene

Sources for HTR1DP1 Gene

Content
Loading form....