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Aliases for HTATSF1P1 Gene

Aliases for HTATSF1P1 Gene

  • HIV-1 Tat Specific Factor 1 Pseudogene 1 2 3 5
  • HIV TAT Specific Factor 1 Pseudogene 2 3
  • HIV-1 Tat Specific Factor 1 Pseudogene 2
  • DJ1033B10.6 3
  • TAT-SF1-L 3
  • HTATSF1P 3

External Ids for HTATSF1P1 Gene

Previous HGNC Symbols for HTATSF1P1 Gene

  • HTATSF1P

Previous GeneCards Identifiers for HTATSF1P1 Gene

  • GC06U902038
  • GC06P033255
  • GC06P033261
  • GC06P033265

Summaries for HTATSF1P1 Gene

GeneCards Summary for HTATSF1P1 Gene

HTATSF1P1 (HIV-1 Tat Specific Factor 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HTATSF1P1 Gene

Genomics for HTATSF1P1 Gene

Regulatory Elements for HTATSF1P1 Gene

Enhancers for HTATSF1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F033247 0.9 FANTOM5 ENCODE 16.5 +11.8 11779 3.3 HDGF PKNOX1 ARNT CREB3L1 MLX SIN3A ARID4B DMAP1 ZNF2 YY1 DAXX HTATSF1P1 MIR219A1 RPL35AP4 LOC102725019 KRT18P9 CYCSP55 ENSG00000233183 TAPBP HCG25
GH06F033203 0.2 ENCODE 16.4 -31.4 -31396 5.8 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 BRD2 RING1 VPS52 RXRB LEMD2 MIR6873 DAXX HCG25 RGL2 MIR5004
GH06F033296 0.2 ENCODE 16.3 +60.9 60941 4.0 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 TAPBP RGL2 HTATSF1P1 MIR219A1 RPL35AP4 LOC102725019 KRT18P9 CYCSP55 DAXX ENSG00000233183
GH06F033414 1.1 FANTOM5 ENCODE 16.2 +179.9 179911 6.4 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 RPL35AP4 HTATSF1P1 MIR219A1 KRT18P9 CYCSP55 LOC102725019 RING1 ENSG00000233183 MIR5004 CUTA
GH06F032965 1.2 ENCODE 16.2 -267.1 -267131 10.4 CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 NFYC BRD2 VPS52 ATF6B LEMD2 RING1 RXRB DAXX MIR6873 HCG25 PPT2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HTATSF1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HTATSF1P1 Gene

Chromosome:
6
Start:
33,237,799 bp from pter
End:
33,239,690 bp from pter
Size:
1,892 bases
Orientation:
Plus strand

Genomic View for HTATSF1P1 Gene

Genes around HTATSF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTATSF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTATSF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for HTATSF1P1 Gene

Proteins for HTATSF1P1 Gene

Post-translational modifications for HTATSF1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTATSF1P1 Gene

Domains & Families for HTATSF1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HTATSF1P1 Gene

Function for HTATSF1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTATSF1P1 Gene

Localization for HTATSF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HTATSF1P1 Gene

Pathways & Interactions for HTATSF1P1 Gene

SuperPathways for HTATSF1P1 Gene

No Data Available

Interacting Proteins for HTATSF1P1 Gene

Gene Ontology (GO) - Biological Process for HTATSF1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HTATSF1P1 Gene

Transcripts for HTATSF1P1 Gene

mRNA/cDNA for HTATSF1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HTATSF1P1 Gene

No ASD Table

Relevant External Links for HTATSF1P1 Gene

GeneLoc Exon Structure for
HTATSF1P1
ECgene alternative splicing isoforms for
HTATSF1P1

Expression for HTATSF1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HTATSF1P1 Gene:

HTATSF1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HTATSF1P1 Gene

Orthologs for HTATSF1P1 Gene

Evolution for HTATSF1P1 Gene

ENSEMBL:
Gene Tree for HTATSF1P1 (if available)
TreeFam:
Gene Tree for HTATSF1P1 (if available)

No data available for Orthologs for HTATSF1P1 Gene

Paralogs for HTATSF1P1 Gene

No data available for Paralogs for HTATSF1P1 Gene

Variants for HTATSF1P1 Gene

Relevant External Links for HTATSF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HTATSF1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HTATSF1P1 Gene

Disorders for HTATSF1P1 Gene

No disorders were found for HTATSF1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HTATSF1P1 Gene

Publications for HTATSF1P1 Gene

No publications were found for HTATSF1P1 Gene.

Products for HTATSF1P1 Gene

Sources for HTATSF1P1 Gene

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