Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HSPE1P6 Gene

Subcategory (RNA class) for HSPE1P6 Gene

lncRNA

Aliases for HSPE1P6 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 6 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 6 2

External Ids for HSPE1P6 Gene

ORGUL Members for HSPE1P6 Gene

Previous GeneCards Identifiers for HSPE1P6 Gene

  • GC00U935065

Summaries for HSPE1P6 Gene

GeneCards Summary for HSPE1P6 Gene

HSPE1P6 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 6) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPE1P6 Gene

Genomics for HSPE1P6 Gene

Regulatory Elements for HSPE1P6 Gene

Enhancers for HSPE1P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F203905 1.1 Ensembl ENCODE 0.8 -3.0 -2995 2.2 GTF2F1 TBP JUN MAX RAD21 BRCA1 RFX5 ZNF121 GATA3 SMC3 SNRPE ZC3H11A HSPE1P6 CBX1P3
GH01F203900 0.6 FANTOM5 0.8 +3.1 3137 0.4 GATA3 NFYB CEBPB CEBPG SNRPE LAX1 ETNK2 HSPE1P6 KRT8P29
GH01F203888 0.9 Ensembl ENCODE 0.4 +14.9 14868 2.2 TBP SMARCC1 TAF1 JUN CEBPB EP300 ZKSCAN1 ZNF121 JUND MAFF SOX13 SNRPE ETNK2 LOC101929441 LAX1 ZC3H11A HSPE1P6 KRT8P29
GH01F203925 0.9 ENCODE 0.3 -22.6 -22557 1.6 HDAC1 PKNOX1 RFX5 ZNF766 CBX5 RCOR1 FOS SMARCA5 JUNB NCOA1 SNRPE HSPE1P6 CBX1P3
GH01F203915 0.5 ENCODE 0.4 -12.1 -12133 0.9 GATA3 JUND FOS MAFK ZC3H11A HSPE1P6 CBX1P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSPE1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSPE1P6 Gene

Chromosome:
1
Start:
203,903,723 bp from pter
End:
203,904,013 bp from pter
Size:
291 bases
Orientation:
Minus strand

Genomic View for HSPE1P6 Gene

Genes around HSPE1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P6 Gene

Proteins for HSPE1P6 Gene

Post-translational modifications for HSPE1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P6 Gene

Domains & Families for HSPE1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPE1P6 Gene

Function for HSPE1P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P6 Gene

Localization for HSPE1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSPE1P6 Gene

Pathways & Interactions for HSPE1P6 Gene

SuperPathways for HSPE1P6 Gene

No Data Available

Interacting Proteins for HSPE1P6 Gene

Gene Ontology (GO) - Biological Process for HSPE1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPE1P6 Gene

Transcripts for HSPE1P6 Gene

mRNA/cDNA for HSPE1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P6 Gene

No ASD Table

Relevant External Links for HSPE1P6 Gene

GeneLoc Exon Structure for
HSPE1P6
ECgene alternative splicing isoforms for
HSPE1P6

Expression for HSPE1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HSPE1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPE1P6 Gene:

HSPE1P6
genes like me logo Genes that share expression patterns with HSPE1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HSPE1P6 Gene

Orthologs for HSPE1P6 Gene

Evolution for HSPE1P6 Gene

ENSEMBL:
Gene Tree for HSPE1P6 (if available)
TreeFam:
Gene Tree for HSPE1P6 (if available)

No data available for Orthologs for HSPE1P6 Gene

Paralogs for HSPE1P6 Gene

No data available for Paralogs for HSPE1P6 Gene

Variants for HSPE1P6 Gene

Relevant External Links for HSPE1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P6 Gene

Disorders for HSPE1P6 Gene

No disorders were found for HSPE1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPE1P6 Gene

Publications for HSPE1P6 Gene

No publications were found for HSPE1P6 Gene.

Products for HSPE1P6 Gene

Sources for HSPE1P6 Gene

Content
Loading form....