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Aliases for HSPE1P26 Gene

Subcategory (RNA class) for HSPE1P26 Gene

lncRNA

Aliases for HSPE1P26 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 26 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 26 2

External Ids for HSPE1P26 Gene

ORGUL Members for HSPE1P26 Gene

Previous GeneCards Identifiers for HSPE1P26 Gene

  • GC00U935337

Summaries for HSPE1P26 Gene

GeneCards Summary for HSPE1P26 Gene

HSPE1P26 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 26) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for HSPE1P26 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for HSPE1P26

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for HSPE1P26 Gene

Genomics for HSPE1P26 Gene

Regulatory Elements for HSPE1P26 Gene

Enhancers for HSPE1P26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F157142 1.3 Ensembl ENCODE 19.6 -776.6 -776600 10.2 HDGF PKNOX1 ZNF493 SIN3A YBX1 ELK1 KLF7 FOS ZNF548 ZNF263 LOC105378074 ENSG00000271265 LOC100420839 HSPE1P26 ENSG00000233044 TMEM242 ENSG00000271040 LOC105378075
GH06F157759 1.8 FANTOM5 Ensembl ENCODE 10.3 -158.6 -158619 11.8 PKNOX1 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 SNX9 LOC100420839 LOC105378074 ENSG00000271265 ENSG00000234361 TATDN2P2 LOC105378078 ENSG00000229502 SYNJ2 RNU6-786P
GH06F158037 1.8 FANTOM5 Ensembl ENCODE 10.3 +117.0 116980 7.3 HDGF PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A YBX1 FEZF1 ZNF2 SYNJ2 TATDN2P2 HSPE1P26 RNU6-786P DYNLT1 LDHAL6FP SNX9 GC06M158055 SYNJ2-IT1
GH06F157533 1.4 Ensembl ENCODE 10.3 -387.4 -387439 7.6 HDGF MLX ARID4B DMAP1 YY1 CBX5 FOS KLF13 SP5 ZHX2 LOC100420839 HSPE1P26 ZDHHC14 MIR3692 LOC105378077
GH06F156962 1.2 Ensembl ENCODE 10.2 -960.7 -960665 1.9 PKNOX1 ATF1 SIN3A RAD21 ZEB1 YY1 ZNF366 CBX5 CREM EGR2 HSPE1P26 ENSG00000218596 PIR63063
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSPE1P26 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSPE1P26 Gene

Chromosome:
6
Start:
157,924,402 bp from pter
End:
157,924,676 bp from pter
Size:
275 bases
Orientation:
Plus strand

Genomic View for HSPE1P26 Gene

Genes around HSPE1P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P26 Gene

ORGUL Member Location for HSPE1P26 Gene

ORGUL Member Location for HSPE1P26 gene

Proteins for HSPE1P26 Gene

Post-translational modifications for HSPE1P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P26 Gene

Domains & Families for HSPE1P26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPE1P26 Gene

Function for HSPE1P26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P26 Gene

Localization for HSPE1P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSPE1P26 Gene

Pathways & Interactions for HSPE1P26 Gene

SuperPathways for HSPE1P26 Gene

No Data Available

Interacting Proteins for HSPE1P26 Gene

Gene Ontology (GO) - Biological Process for HSPE1P26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPE1P26 Gene

Transcripts for HSPE1P26 Gene

fRNAdb Secondary structures for HSPE1P26 Gene

  • FR104944

mRNA/cDNA for HSPE1P26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P26 Gene

No ASD Table

Relevant External Links for HSPE1P26 Gene

GeneLoc Exon Structure for
HSPE1P26
ECgene alternative splicing isoforms for
HSPE1P26

Expression for HSPE1P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HSPE1P26 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPE1P26 Gene:

HSPE1P26
genes like me logo Genes that share expression patterns with HSPE1P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HSPE1P26 Gene

Orthologs for HSPE1P26 Gene

Evolution for HSPE1P26 Gene

ENSEMBL:
Gene Tree for HSPE1P26 (if available)
TreeFam:
Gene Tree for HSPE1P26 (if available)

No data available for Orthologs for HSPE1P26 Gene

Paralogs for HSPE1P26 Gene

No data available for Paralogs for HSPE1P26 Gene

Variants for HSPE1P26 Gene

Relevant External Links for HSPE1P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P26 Gene

Disorders for HSPE1P26 Gene

No disorders were found for HSPE1P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPE1P26 Gene

Publications for HSPE1P26 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for HSPE1P26 Gene

Sources for HSPE1P26 Gene

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