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Aliases for HSPE1P20 Gene

Subcategory (RNA class) for HSPE1P20 Gene

lncRNA

Aliases for HSPE1P20 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 20 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 20 2

External Ids for HSPE1P20 Gene

ORGUL Members for HSPE1P20 Gene

Previous GeneCards Identifiers for HSPE1P20 Gene

  • GC12P127397

Summaries for HSPE1P20 Gene

GeneCards Summary for HSPE1P20 Gene

HSPE1P20 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 20) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HSPE1P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPE1P20 Gene

Genomics for HSPE1P20 Gene

GeneHancer (GH) Regulatory Elements for HSPE1P20 Gene

Promoters and enhancers for HSPE1P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I126915 Enhancer 0.6 ENCODE 0.8 +3.5 3496 0.2 MEIS2 PKNOX1 ATF1 ETV1 TEAD4 DPF2 ZNF507 GABPA ZNF395 CHAMP1 HSPE1P20 GC12M126883 LINC02405
GH12I126914 Enhancer 0.6 ENCODE 0.8 +2.7 2726 0.8 ATF1 L3MBTL2 ETV1 MAX MNT ZNF354B GABPA ZNF592 MGA HSPE1P20 GC12M126883
GH12I126948 Enhancer 0.9 dbSUPER 0.3 +39.2 39240 4.8 PKNOX1 ATF1 TCF12 ZNF766 ATF7 CAVIN1 ZNF592 MEF2D ATF4 HMBOX1 GC12M126883 HSPE1P20 LINC02405
GH12I126925 Enhancer 0.6 dbSUPER 0.4 +14.5 14493 2 CTCF REST ZEB2 RAD21 ATF2 ARID2 CREB1 ATF7 HSPE1P20 GC12M126883 LINC02405
GH12I126936 Enhancer 0.8 Ensembl dbSUPER 0.3 +24.7 24662 0.6 MAX MAFG RAD21 YY1 JUND ZNF316 NFIC ATF3 HNF4A ZBTB33 GC12M126883 HSPE1P20 LINC02405
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSPE1P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPE1P20 Gene

Genomic Locations for HSPE1P20 Gene
chr12:126,912,034-126,912,323
(GRCh38/hg38)
Size:
290 bases
Orientation:
Plus strand
chr12:127,396,244-127,396,872
(GRCh37/hg19)

Genomic View for HSPE1P20 Gene

Genes around HSPE1P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P20 Gene

Proteins for HSPE1P20 Gene

Post-translational modifications for HSPE1P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P20 Gene

Domains & Families for HSPE1P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPE1P20 Gene

Function for HSPE1P20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P20 Gene

Localization for HSPE1P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPE1P20 Gene

Pathways & Interactions for HSPE1P20 Gene

SuperPathways for HSPE1P20 Gene

No Data Available

Interacting Proteins for HSPE1P20 Gene

Gene Ontology (GO) - Biological Process for HSPE1P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPE1P20 Gene

Drugs & Compounds for HSPE1P20 Gene

No Compound Related Data Available

Transcripts for HSPE1P20 Gene

mRNA/cDNA for HSPE1P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P20 Gene

No ASD Table

Relevant External Links for HSPE1P20 Gene

GeneLoc Exon Structure for
HSPE1P20
ECgene alternative splicing isoforms for
HSPE1P20

Expression for HSPE1P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPE1P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPE1P20 Gene:

HSPE1P20
genes like me logo Genes that share expression patterns with HSPE1P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPE1P20 Gene

Orthologs for HSPE1P20 Gene

Evolution for HSPE1P20 Gene

ENSEMBL:
Gene Tree for HSPE1P20 (if available)
TreeFam:
Gene Tree for HSPE1P20 (if available)

No data available for Orthologs for HSPE1P20 Gene

Paralogs for HSPE1P20 Gene

No data available for Paralogs for HSPE1P20 Gene

Variants for HSPE1P20 Gene

Additional Variant Information for HSPE1P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P20 Gene

Disorders for HSPE1P20 Gene

No disorders were found for HSPE1P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPE1P20 Gene

Publications for HSPE1P20 Gene

No publications were found for HSPE1P20 Gene.

Products for HSPE1P20 Gene

Sources for HSPE1P20 Gene

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